RNA–Protein interactions for RNA: YLR417W

VPS36, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS36, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS36YLR417W YRO2P38079 344 aa6.36□□□□□ -1.39
VPS36YLR417W ALG2P43636 503 aa6.36□□□□□ -1.39
VPS36YLR417W YJL045WP47052 634 aa6.36□□□□□ -1.39
VPS36YLR417W HLJ1P48353 224 aa6.36□□□□□ -1.39
VPS36YLR417W ALT1P52893 592 aa6.36□□□□□ -1.39
VPS36YLR417W THS1P04801 734 aaKnown RBP6.36□□□□□ -1.39
VPS36YLR417W RAD53P22216 821 aa6.36□□□□□ -1.39
VPS36YLR417W SFA1P32771 386 aa6.36□□□□□ -1.39
VPS36YLR417W YJR008WP47085 338 aa6.36□□□□□ -1.39
VPS36YLR417W TNA1P53322 534 aa6.36□□□□□ -1.39
VPS36YLR417W BUL2Q03758 920 aaKnown RBP6.36□□□□□ -1.39
VPS36YLR417W ATG13Q06628 738 aa6.36□□□□□ -1.39
VPS36YLR417W MEF1P25039 761 aa6.35□□□□□ -1.39
VPS36YLR417W PRO1P32264 428 aa6.35□□□□□ -1.39
VPS36YLR417W YSC84P32793 468 aa6.35□□□□□ -1.39
VPS36YLR417W DSS1P39112 969 aa6.35□□□□□ -1.39
VPS36YLR417W SAH1P39954 449 aaKnown RBP6.35□□□□□ -1.39
VPS36YLR417W ATG36P46983 293 aa6.35□□□□□ -1.39
VPS36YLR417W PMT3P47190 753 aa6.35□□□□□ -1.39
VPS36YLR417W BOI2P39969 1040 aa6.34□□□□□ -1.39
VPS36YLR417W RTS3P53289 263 aa6.34□□□□□ -1.39
VPS36YLR417W TPP1Q03796 238 aa6.34□□□□□ -1.39
VPS36YLR417W MTC5Q03897 1148 aa6.34□□□□□ -1.39
VPS36YLR417W PUS7Q08647 676 aaKnown RBP6.34□□□□□ -1.39
VPS36YLR417W YLL058WQ12198 575 aa6.34□□□□□ -1.39
VPS36YLR417W PHR1P05066 565 aaKnown RBP RIP-Chip data6.33□□□□□ -1.4not detected
VPS36YLR417W AFR1P33304 620 aa6.33□□□□□ -1.4
VPS36YLR417W YKL151CP36059 337 aa6.33□□□□□ -1.4
VPS36YLR417W BAP2P38084 609 aa6.33□□□□□ -1.4
VPS36YLR417W PAF1P38351 445 aa6.33□□□□□ -1.4
VPS36YLR417W NMD3P38861 518 aaKnown RBP6.33□□□□□ -1.4
VPS36YLR417W CCM1P48237 864 aaPredicted RBP6.33□□□□□ -1.4
VPS36YLR417W YGR035CP53222 116 aa6.33□□□□□ -1.4
VPS36YLR417W HRQ1Q05549 1077 aa6.33□□□□□ -1.4
VPS36YLR417W RPS4AP0CX35 261 aaKnown RBP6.33□□□□□ -1.4
VPS36YLR417W RPS4BP0CX36 261 aaKnown RBP6.33□□□□□ -1.4
VPS36YLR417W MRC1P25588 1096 aa6.33□□□□□ -1.4
VPS36YLR417W REC104P33323 182 aa6.33□□□□□ -1.4
VPS36YLR417W UGA2P38067 497 aa6.33□□□□□ -1.4
VPS36YLR417W SNF5P18480 905 aa6.32□□□□□ -1.4
VPS36YLR417W VBA3P25594 458 aa6.32□□□□□ -1.4
VPS36YLR417W TOK1P40310 691 aa6.32□□□□□ -1.4
VPS36YLR417W YGR237CP50089 785 aa6.32□□□□□ -1.4
VPS36YLR417W BUD9P53226 547 aa6.32□□□□□ -1.4
VPS36YLR417W YLR001CQ07895 862 aa6.32□□□□□ -1.4
VPS36YLR417W COQ4O13525 335 aa6.31□□□□□ -1.4
VPS36YLR417W RSC6P25632 483 aa6.31□□□□□ -1.4
VPS36YLR417W SPC29P33419 253 aa6.31□□□□□ -1.4
VPS36YLR417W NOP2P40991 618 aaKnown RBP6.31□□□□□ -1.4
VPS36YLR417W YNR014WP53719 212 aa6.31□□□□□ -1.4
VPS36YLR417W THI73Q07904 523 aa6.31□□□□□ -1.4
VPS36YLR417W AI1P03875 834 aa6.3□□□□□ -1.4
VPS36YLR417W NPP1P25353 742 aa6.3□□□□□ -1.4
VPS36YLR417W GBP2P25555 427 aaKnown RBP RIP-Chip data6.3□□□□□ -1.4not detected
VPS36YLR417W YKR078WP36158 585 aaKnown RBP6.3□□□□□ -1.4
VPS36YLR417W SEC26P41810 973 aaKnown RBP6.3□□□□□ -1.4
VPS36YLR417W AI3P03877 415 aa6.3□□□□□ -1.4
VPS36YLR417W TOP1P04786 769 aa6.3□□□□□ -1.4
VPS36YLR417W YEL1P34225 687 aa6.3□□□□□ -1.4
VPS36YLR417W PIK1P39104 1066 aa6.3□□□□□ -1.4
VPS36YLR417W YFL054CP43549 646 aa6.3□□□□□ -1.4
VPS36YLR417W GYP7P48365 746 aa6.3□□□□□ -1.4
VPS36YLR417W DAM1P53267 343 aa6.3□□□□□ -1.4
VPS36YLR417W YGR283CP53336 341 aaPredicted RBP6.3□□□□□ -1.4
VPS36YLR417W GAS5Q08193 484 aa6.3□□□□□ -1.4
VPS36YLR417W CDC9P04819 755 aa6.29□□□□□ -1.4
VPS36YLR417W SDA1P53313 767 aaKnown RBP6.29□□□□□ -1.4
VPS36YLR417W UME1Q03010 460 aa6.29□□□□□ -1.4
VPS36YLR417W MDM38Q08179 573 aa6.29□□□□□ -1.4
VPS36YLR417W BI4P03879 638 aa6.28□□□□□ -1.4
VPS36YLR417W SRD1P09007 221 aa6.28□□□□□ -1.4
VPS36YLR417W ERT1P38140 529 aa6.28□□□□□ -1.4
VPS36YLR417W CCZ1P38273 704 aa6.28□□□□□ -1.4
VPS36YLR417W TSL1P38427 1098 aaKnown RBP6.28□□□□□ -1.4
VPS36YLR417W ATP25Q03153 612 aa6.28□□□□□ -1.4
VPS36YLR417W EAR1Q03212 550 aa6.28□□□□□ -1.4
VPS36YLR417W NUP145P49687 1317 aa6.28□□□□□ -1.4
VPS36YLR417W SRO9P25567 434 aaKnown RBP6.28□□□□□ -1.4
VPS36YLR417W MTC2P34246 357 aa6.28□□□□□ -1.4
VPS36YLR417W MDJ1P35191 511 aa6.28□□□□□ -1.4
VPS36YLR417W EMC3P36039 253 aa6.28□□□□□ -1.4
VPS36YLR417W MGS1P40151 587 aa6.28□□□□□ -1.4
VPS36YLR417W SBE2P42223 864 aaKnown RBP6.28□□□□□ -1.4
VPS36YLR417W GYP8P43570 497 aa6.28□□□□□ -1.4
VPS36YLR417W MTC3P53077 123 aa6.28□□□□□ -1.4
VPS36YLR417W RCL1Q08096 367 aaPredicted RBP6.28□□□□□ -1.4
VPS36YLR417W RRT14P40470 206 aa6.27□□□□□ -1.41
VPS36YLR417W FOL1P53848 824 aa6.27□□□□□ -1.41
VPS36YLR417W CDC48P25694 835 aaKnown RBP6.26□□□□□ -1.41
VPS36YLR417W MDL2P33311 773 aa6.26□□□□□ -1.41
VPS36YLR417W GRX7P38068 203 aa6.26□□□□□ -1.41
VPS36YLR417W MCX1P38323 520 aaPredicted RBP6.26□□□□□ -1.41
VPS36YLR417W YBR238CP38330 731 aaKnown RBP6.26□□□□□ -1.41
VPS36YLR417W YHL012WP38709 493 aa6.26□□□□□ -1.41
VPS36YLR417W YER158CP40095 573 aa6.26□□□□□ -1.41
VPS36YLR417W CAF16P43569 289 aa6.26□□□□□ -1.41
VPS36YLR417W NIT3P49954 291 aa6.26□□□□□ -1.41
VPS36YLR417W ARI1P53111 347 aaKnown RBP6.26□□□□□ -1.41
VPS36YLR417W SRT1Q03175 343 aa6.26□□□□□ -1.41
VPS36YLR417W COG8Q04632 607 aa6.26□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 62.5 ms