RNA–Protein interactions for RNA: YLR228C

ECM22, Transcript of Sterol regulatory element binding protein, yeastyeast

Gene ECM22, Length 2,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM22YLR228C RIM20Q12033 661 aa4.32□□□□□ -1.72
ECM22YLR228C ENO2P00925 437 aaKnown RBP4.32□□□□□ -1.72
ECM22YLR228C ADE3P07245 946 aaKnown RBP4.32□□□□□ -1.72
ECM22YLR228C ADH4P10127 382 aa4.32□□□□□ -1.72
ECM22YLR228C SEC8P32855 1065 aa4.32□□□□□ -1.72
ECM22YLR228C STE13P33894 931 aa4.32□□□□□ -1.72
ECM22YLR228C GGA2P38817 585 aaKnown RBP4.32□□□□□ -1.72
ECM22YLR228C ARB1P40024 610 aaKnown RBP4.32□□□□□ -1.72
ECM22YLR228C BRO1P48582 844 aa4.32□□□□□ -1.72
ECM22YLR228C UTP22P53254 1237 aaPredicted RBP4.32□□□□□ -1.72
ECM22YLR228C YPL062WQ02781 134 aa4.32□□□□□ -1.72
ECM22YLR228C ERB1Q04660 807 aaKnown RBP4.32□□□□□ -1.72
ECM22YLR228C NOP6Q07623 225 aaKnown RBP4.32□□□□□ -1.72
ECM22YLR228C ALR1Q08269 859 aa4.32□□□□□ -1.72
ECM22YLR228C BUD7Q08754 746 aa4.32□□□□□ -1.72
ECM22YLR228C YPL150WQ12152 901 aa4.32□□□□□ -1.72
ECM22YLR228C RIB2Q12362 591 aaKnown RBP4.32□□□□□ -1.72
ECM22YLR228C PET122P10355 254 aa4.31□□□□□ -1.72
ECM22YLR228C PAP1P29468 568 aaKnown RBP4.31□□□□□ -1.72
ECM22YLR228C SEC65P29478 273 aa4.31□□□□□ -1.72
ECM22YLR228C BOI1P38041 980 aaKnown RBP4.31□□□□□ -1.72
ECM22YLR228C EDS1P38073 919 aa4.31□□□□□ -1.72
ECM22YLR228C HEK2P38199 381 aaKnown RBP RIP-Chip data4.31□□□□□ -1.72 RIP-Chip
ECM22YLR228C MCM6P53091 1017 aaKnown RBP4.31□□□□□ -1.72
ECM22YLR228C SPO71Q03868 1245 aa4.31□□□□□ -1.72
ECM22YLR228C MSH5Q12175 901 aa4.31□□□□□ -1.72
ECM22YLR228C CLF1Q12309 687 aaPredicted RBP4.31□□□□□ -1.72
ECM22YLR228C SEC23P15303 768 aaKnown RBP4.31□□□□□ -1.72
ECM22YLR228C SCJ1P25303 377 aa4.31□□□□□ -1.72
ECM22YLR228C HSP78P33416 811 aa4.31□□□□□ -1.72
ECM22YLR228C SQT1P35184 431 aa4.31□□□□□ -1.72
ECM22YLR228C YKT6P36015 200 aaKnown RBP4.31□□□□□ -1.72
ECM22YLR228C CCC2P38995 1004 aa4.31□□□□□ -1.72
ECM22YLR228C SYH1Q02875 849 aaKnown RBP4.31□□□□□ -1.72
ECM22YLR228C CWC15Q03772 175 aaKnown RBP4.31□□□□□ -1.72
ECM22YLR228C HCR1Q05775 265 aaKnown RBP4.31□□□□□ -1.72
ECM22YLR228C GPR1Q12361 961 aa4.31□□□□□ -1.72
ECM22YLR228C APC2Q12440 853 aa4.31□□□□□ -1.72
ECM22YLR228C RMP1Q12530 201 aa4.31□□□□□ -1.72
ECM22YLR228C AI4P03878 556 aa4.3□□□□□ -1.72
ECM22YLR228C ARG4P04076 463 aaPredicted RBP4.3□□□□□ -1.72
ECM22YLR228C MPH3P0CE00 602 aa4.3□□□□□ -1.72
ECM22YLR228C SSE1P32589 693 aaKnown RBP4.3□□□□□ -1.72
ECM22YLR228C MRE11P32829 692 aa4.3□□□□□ -1.72
ECM22YLR228C SPP381P38282 291 aaPredicted RBP4.3□□□□□ -1.72
ECM22YLR228C MCX1P38323 520 aaPredicted RBP4.3□□□□□ -1.72
ECM22YLR228C TMA22P47089 198 aaPredicted RBP4.3□□□□□ -1.72
ECM22YLR228C IMD4P50094 524 aaKnown RBP4.3□□□□□ -1.72
ECM22YLR228C ZDS1P50111 915 aaKnown RBP4.3□□□□□ -1.72
ECM22YLR228C TEL2P53038 688 aa4.3□□□□□ -1.72
ECM22YLR228C EAR1Q03212 550 aa4.3□□□□□ -1.72
ECM22YLR228C SXM1Q04175 944 aaKnown RBP4.3□□□□□ -1.72
ECM22YLR228C YDR341CQ05506 607 aaKnown RBP4.3□□□□□ -1.72
ECM22YLR228C MAG2Q06436 670 aaKnown RBP4.3□□□□□ -1.72
ECM22YLR228C OSW1Q08692 278 aa4.3□□□□□ -1.72
ECM22YLR228C LEU2P04173 364 aaPredicted RBP4.3□□□□□ -1.72
ECM22YLR228C PBS2P08018 668 aa4.3□□□□□ -1.72
ECM22YLR228C REC107P21651 314 aa4.3□□□□□ -1.72
ECM22YLR228C SEC21P32074 935 aaKnown RBP4.3□□□□□ -1.72
ECM22YLR228C SEC6P32844 805 aa4.3□□□□□ -1.72
ECM22YLR228C NUP120P35729 1037 aa4.3□□□□□ -1.72
ECM22YLR228C KDX1P36005 433 aa4.3□□□□□ -1.72
ECM22YLR228C FES1P38260 290 aa4.3□□□□□ -1.72
ECM22YLR228C SAK1P38990 1142 aa4.3□□□□□ -1.72
ECM22YLR228C MPT5P39016 859 aaKnown RBP RIP-Chip data4.3□□□□□ -1.72not detected
ECM22YLR228C SPC72P39723 622 aa4.3□□□□□ -1.72
ECM22YLR228C TIF4631P39935 952 aaKnown RBP4.3□□□□□ -1.72
ECM22YLR228C AXL1P40851 1208 aa4.3□□□□□ -1.72
ECM22YLR228C SQS1P53866 767 aaKnown RBP4.3□□□□□ -1.72
ECM22YLR228C HEH2Q03281 663 aa4.3□□□□□ -1.72
ECM22YLR228C PPM1Q04081 328 aa4.3□□□□□ -1.72
ECM22YLR228C YLH47Q06493 454 aa4.3□□□□□ -1.72
ECM22YLR228C RIX7Q07844 837 aaKnown RBP4.3□□□□□ -1.72
ECM22YLR228C PSK2Q08217 1101 aa4.3□□□□□ -1.72
ECM22YLR228C TFB4Q12004 338 aa4.3□□□□□ -1.72
ECM22YLR228C ENO1P00924 437 aaKnown RBP4.29□□□□□ -1.72
ECM22YLR228C VMA2P16140 517 aaKnown RBP4.29□□□□□ -1.72
ECM22YLR228C PYC2P32327 1180 aaKnown RBP4.29□□□□□ -1.72
ECM22YLR228C MVD1P32377 396 aaKnown RBP4.29□□□□□ -1.72
ECM22YLR228C OAF3P36023 863 aa4.29□□□□□ -1.72
ECM22YLR228C DBP7P36120 742 aaKnown RBP4.29□□□□□ -1.72
ECM22YLR228C MUM2P38236 366 aa4.29□□□□□ -1.72
ECM22YLR228C YBR062CP38239 180 aa4.29□□□□□ -1.72
ECM22YLR228C EFM2P38347 419 aa4.29□□□□□ -1.72
ECM22YLR228C HSM3P38348 480 aa4.29□□□□□ -1.72
ECM22YLR228C BRL1P38770 471 aa4.29□□□□□ -1.72
ECM22YLR228C DSD1P53095 428 aa4.29□□□□□ -1.72
ECM22YLR228C YGR122WP53272 402 aa4.29□□□□□ -1.72
ECM22YLR228C UBP3Q01477 912 aaKnown RBP RIP-Chip data4.29□□□□□ -1.72 RIP-Chip
ECM22YLR228C FIN1Q03898 291 aa4.29□□□□□ -1.72
ECM22YLR228C RSM24Q03976 319 aa4.29□□□□□ -1.72
ECM22YLR228C SYF1Q04048 859 aaPredicted RBP4.29□□□□□ -1.72
ECM22YLR228C TAP42Q04372 366 aa4.29□□□□□ -1.72
ECM22YLR228C HFD1Q04458 532 aa4.29□□□□□ -1.72
ECM22YLR228C YLR257WQ06146 321 aaKnown RBP4.29□□□□□ -1.72
ECM22YLR228C CSR1Q06705 408 aaKnown RBP4.29□□□□□ -1.72
ECM22YLR228C DNL4Q08387 944 aaPredicted RBP4.29□□□□□ -1.72
ECM22YLR228C NOB1Q08444 459 aaKnown RBP4.29□□□□□ -1.72
ECM22YLR228C YIG1Q08956 461 aa4.29□□□□□ -1.72
ECM22YLR228C HTZ1Q12692 134 aaKnown RBP4.29□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 46.5 ms