RNA–Protein interactions for RNA: YJR001W

AVT1, Transcript of Vacuolar transporter, yeast

Gene AVT1, Length 1,809 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
AVT1	YJR001W	PBP1	P53297	722 aa	Known RBP	4.9	□□□□□ -1.63
AVT1	YJR001W	HEH2	Q03281	663 aa		4.9	□□□□□ -1.63
AVT1	YJR001W	DAL4	Q04895	635 aa		4.9	□□□□□ -1.63
AVT1	YJR001W	YDR286C	Q05530	114 aa		4.9	□□□□□ -1.63
AVT1	YJR001W	EAF1	Q06337	982 aa		4.9	□□□□□ -1.63
AVT1	YJR001W	ARR1	Q06596	294 aa		4.9	□□□□□ -1.63
AVT1	YJR001W	ALR1	Q08269	859 aa		4.9	□□□□□ -1.63
AVT1	YJR001W	RTT10	Q08924	1013 aa		4.9	□□□□□ -1.63
AVT1	YJR001W	GCR1	P07261	785 aa		4.89	□□□□□ -1.63
AVT1	YJR001W	THR4	P16120	514 aa	Known RBP	4.89	□□□□□ -1.63
AVT1	YJR001W	SRP54	P20424	541 aa	Known RBP	4.89	□□□□□ -1.63
AVT1	YJR001W	CDC60	P26637	1090 aa	Known RBP	4.89	□□□□□ -1.63
AVT1	YJR001W	KIP2	P28743	706 aa		4.89	□□□□□ -1.63
AVT1	YJR001W	EFB1	P32471	206 aa	Known RBP	4.89	□□□□□ -1.63
AVT1	YJR001W	MKK2	P32491	506 aa		4.89	□□□□□ -1.63
AVT1	YJR001W	YKL100C	P34248	587 aa		4.89	□□□□□ -1.63
AVT1	YJR001W	TYS1	P36421	394 aa	Known RBP	4.89	□□□□□ -1.63
AVT1	YJR001W	KTR4	P38131	464 aa		4.89	□□□□□ -1.63
AVT1	YJR001W	GDH3	P39708	457 aa		4.89	□□□□□ -1.63
AVT1	YJR001W	AIM9	P40053	627 aa	Known RBP	4.89	□□□□□ -1.63
AVT1	YJR001W	IRR1	P40541	1150 aa		4.89	□□□□□ -1.63
AVT1	YJR001W	HUL4	P40985	892 aa		4.89	□□□□□ -1.63
AVT1	YJR001W	CWH41	P53008	833 aa		4.89	□□□□□ -1.63
AVT1	YJR001W	UTP8	P53276	713 aa	Known RBP	4.89	□□□□□ -1.63
AVT1	YJR001W	PAP2	P53632	584 aa	Known RBP	4.89	□□□□□ -1.63
AVT1	YJR001W	MLC2	Q06580	163 aa		4.89	□□□□□ -1.63
AVT1	YJR001W	IQG1	Q12280	1495 aa		4.89	□□□□□ -1.63
AVT1	YJR001W	ACE2	P21192	770 aa		4.88	□□□□□ -1.63
AVT1	YJR001W	APN1	P22936	367 aa		4.88	□□□□□ -1.63
AVT1	YJR001W	ARE1	P25628	610 aa		4.88	□□□□□ -1.63
AVT1	YJR001W	BAP2	P38084	609 aa		4.88	□□□□□ -1.63
AVT1	YJR001W	ETP1	P38748	585 aa	Known RBP	4.88	□□□□□ -1.63
AVT1	YJR001W	CCT3	P39077	534 aa	Known RBP	4.88	□□□□□ -1.63
AVT1	YJR001W	MAM1	P40065	302 aa		4.88	□□□□□ -1.63
AVT1	YJR001W	YTA6	P40328	754 aa		4.88	□□□□□ -1.63
AVT1	YJR001W	FKH1	P40466	484 aa		4.88	□□□□□ -1.63
AVT1	YJR001W	YFL034W	P43564	1073 aa		4.88	□□□□□ -1.63
AVT1	YJR001W	SUM1	P46676	1062 aa		4.88	□□□□□ -1.63
AVT1	YJR001W	SDA1	P53313	767 aa	Known RBP	4.88	□□□□□ -1.63
AVT1	YJR001W	REX2	P54964	269 aa	Known RBP	4.88	□□□□□ -1.63
AVT1	YJR001W	SHE9	Q04172	456 aa		4.88	□□□□□ -1.63
AVT1	YJR001W	CAB1	Q04430	367 aa		4.88	□□□□□ -1.63
AVT1	YJR001W	HFD1	Q04458	532 aa		4.88	□□□□□ -1.63
AVT1	YJR001W	NDL1	Q06568	189 aa		4.88	□□□□□ -1.63
AVT1	YJR001W	PGC1	Q08959	321 aa		4.88	□□□□□ -1.63
AVT1	YJR001W	HMI1	Q12039	706 aa		4.88	□□□□□ -1.63
AVT1	YJR001W	YSP2	Q06681	1438 aa		4.88	□□□□□ -1.63
AVT1	YJR001W	GCN2	P15442	1659 aa		4.88	□□□□□ -1.63
AVT1	YJR001W	AI4	P03878	556 aa		4.88	□□□□□ -1.63
AVT1	YJR001W	SBP1	P10080	294 aa	Known RBP	4.88	□□□□□ -1.63
AVT1	YJR001W	RPP1B	P10622	106 aa	Known RBP	4.88	□□□□□ -1.63
AVT1	YJR001W	SEC23	P15303	768 aa	Known RBP	4.88	□□□□□ -1.63
AVT1	YJR001W	RGP1	P16664	663 aa		4.88	□□□□□ -1.63
AVT1	YJR001W	KCC4	P25389	1037 aa		4.88	□□□□□ -1.63
AVT1	YJR001W	NTH2	P35172	780 aa		4.88	□□□□□ -1.63
AVT1	YJR001W	EAP1	P36041	632 aa	Known RBP	4.88	□□□□□ -1.63
AVT1	YJR001W	RRF1	P38771	230 aa		4.88	□□□□□ -1.63
AVT1	YJR001W	BCD1	P38772	366 aa		4.88	□□□□□ -1.63
AVT1	YJR001W	SEC26	P41810	973 aa	Known RBP	4.88	□□□□□ -1.63
AVT1	YJR001W	VNX1	P42839	908 aa		4.88	□□□□□ -1.63
AVT1	YJR001W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	not detected
AVT1	YJR001W	VPS30	Q02948	557 aa		4.88	□□□□□ -1.63
AVT1	YJR001W	TAP42	Q04372	366 aa		4.88	□□□□□ -1.63
AVT1	YJR001W	OPY2	Q06810	360 aa		4.88	□□□□□ -1.63
AVT1	YJR001W	SAM3	Q08986	587 aa		4.88	□□□□□ -1.63
AVT1	YJR001W	RKM4	Q12504	494 aa		4.88	□□□□□ -1.63
AVT1	YJR001W	LTE1	P07866	1435 aa		4.87	□□□□□ -1.63
AVT1	YJR001W	SPO16	P17122	198 aa		4.87	□□□□□ -1.63
AVT1	YJR001W	AGP1	P25376	633 aa		4.87	□□□□□ -1.63
AVT1	YJR001W	YKL133C	P36066	463 aa		4.87	□□□□□ -1.63
AVT1	YJR001W	LAM1	P38851	1228 aa		4.87	□□□□□ -1.63
AVT1	YJR001W	MEF2	P39677	819 aa		4.87	□□□□□ -1.63
AVT1	YJR001W	ACA1	P39970	489 aa		4.87	□□□□□ -1.63
AVT1	YJR001W	MXR1	P40029	184 aa		4.87	□□□□□ -1.63
AVT1	YJR001W	MGS1	P40151	587 aa		4.87	□□□□□ -1.63
AVT1	YJR001W	EMW1	P42842	904 aa	Known RBP	4.87	□□□□□ -1.63
AVT1	YJR001W	PEX21	P50091	288 aa		4.87	□□□□□ -1.63
AVT1	YJR001W	NPY1	P53164	384 aa		4.87	□□□□□ -1.63
AVT1	YJR001W	DSL1	P53847	754 aa		4.87	□□□□□ -1.63
AVT1	YJR001W	SNP1	Q00916	300 aa	Predicted RBP	4.87	□□□□□ -1.63
AVT1	YJR001W	YPL109C	Q02981	657 aa		4.87	□□□□□ -1.63
AVT1	YJR001W	BSC2	Q05611	235 aa		4.87	□□□□□ -1.63
AVT1	YJR001W	PIB1	Q06651	286 aa		4.87	□□□□□ -1.63
AVT1	YJR001W	CDC73	Q06697	393 aa		4.87	□□□□□ -1.63
AVT1	YJR001W	ISA1	Q07821	250 aa	Predicted RBP	4.87	□□□□□ -1.63
AVT1	YJR001W	YRM1	Q12340	786 aa		4.87	□□□□□ -1.63
AVT1	YJR001W	BRR1	Q99177	341 aa	Predicted RBP	4.87	□□□□□ -1.63
AVT1	YJR001W	HMG1	P12683	1054 aa		4.86	□□□□□ -1.63
AVT1	YJR001W	IDI1	P15496	288 aa		4.86	□□□□□ -1.63
AVT1	YJR001W	PHO84	P25297	587 aa	Known RBP	4.86	□□□□□ -1.63
AVT1	YJR001W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
AVT1	YJR001W	IME2	P32581	645 aa		4.86	□□□□□ -1.63
AVT1	YJR001W	PXA2	P34230	853 aa		4.86	□□□□□ -1.63
AVT1	YJR001W	COY1	P34237	679 aa		4.86	□□□□□ -1.63
AVT1	YJR001W	ATG19	P35193	415 aa		4.86	□□□□□ -1.63
AVT1	YJR001W	MRP8	P35719	219 aa		4.86	□□□□□ -1.63
AVT1	YJR001W	EFM2	P38347	419 aa		4.86	□□□□□ -1.63
AVT1	YJR001W	PIC2	P40035	300 aa		4.86	□□□□□ -1.63
AVT1	YJR001W	SDS3	P40505	327 aa		4.86	□□□□□ -1.63
AVT1	YJR001W	HIS6	P40545	261 aa		4.86	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 27.8 ms