RNA–Protein interactions for RNA: YGR150C

CCM1, Transcript of Mitochondrial 15S rRNA-binding protein, yeast

Gene CCM1, Length 2,595 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CCM1	YGR150C	PHO81	P17442	1178 aa		3.79	□□□□□ -1.8
CCM1	YGR150C	RAD53	P22216	821 aa		3.79	□□□□□ -1.8
CCM1	YGR150C	TPD3	P31383	635 aa		3.79	□□□□□ -1.8
CCM1	YGR150C	YEL1	P34225	687 aa		3.79	□□□□□ -1.8
CCM1	YGR150C	SQT1	P35184	431 aa		3.79	□□□□□ -1.8
CCM1	YGR150C	CKB2	P38930	258 aa		3.79	□□□□□ -1.8
CCM1	YGR150C	MBP1	P39678	833 aa		3.79	□□□□□ -1.8
CCM1	YGR150C	RRD1	P40454	393 aa	Known RBP	3.79	□□□□□ -1.8
CCM1	YGR150C	GPD2	P41911	440 aa	Known RBP	3.79	□□□□□ -1.8
CCM1	YGR150C	QRI7	P43122	407 aa		3.79	□□□□□ -1.8
CCM1	YGR150C	UBP6	P43593	499 aa	Known RBP	3.79	□□□□□ -1.8
CCM1	YGR150C	YGL140C	P53120	1219 aa		3.79	□□□□□ -1.8
CCM1	YGR150C	YNL058C	P53947	316 aa		3.79	□□□□□ -1.8
CCM1	YGR150C	NSE5	Q03718	556 aa		3.79	□□□□□ -1.8
CCM1	YGR150C	MSH6	Q03834	1242 aa		3.79	□□□□□ -1.8
CCM1	YGR150C	SCM3	Q12334	223 aa		3.79	□□□□□ -1.8
CCM1	YGR150C	SPO21	Q12411	609 aa		3.79	□□□□□ -1.8
CCM1	YGR150C	RAD18	P10862	487 aa		3.78	□□□□□ -1.8
CCM1	YGR150C	HEM13	P11353	328 aa	Known RBP	3.78	□□□□□ -1.8
CCM1	YGR150C	MRP7	P12687	371 aa		3.78	□□□□□ -1.8
CCM1	YGR150C	PFK1	P16861	987 aa	Known RBP	3.78	□□□□□ -1.8
CCM1	YGR150C	SFL1	P20134	766 aa		3.78	□□□□□ -1.8
CCM1	YGR150C	RER1	P25560	188 aa		3.78	□□□□□ -1.8
CCM1	YGR150C	DAL3	P32459	195 aa		3.78	□□□□□ -1.8
CCM1	YGR150C	DUR3	P33413	735 aa		3.78	□□□□□ -1.8
CCM1	YGR150C	SPC29	P33419	253 aa		3.78	□□□□□ -1.8
CCM1	YGR150C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	3.78	□□□□□ -1.8	not detected
CCM1	YGR150C	YKL100C	P34248	587 aa		3.78	□□□□□ -1.8
CCM1	YGR150C	PEX28	P38848	579 aa		3.78	□□□□□ -1.8
CCM1	YGR150C	SAH1	P39954	449 aa	Known RBP	3.78	□□□□□ -1.8
CCM1	YGR150C	CIA1	Q05583	330 aa		3.78	□□□□□ -1.8
CCM1	YGR150C	RMP1	Q12530	201 aa		3.78	□□□□□ -1.8
CCM1	YGR150C	DAT1	P13483	248 aa	Known RBP	3.78	□□□□□ -1.8
CCM1	YGR150C	SAN1	P22470	610 aa		3.78	□□□□□ -1.8
CCM1	YGR150C	HEM12	P32347	362 aa	Predicted RBP	3.78	□□□□□ -1.8
CCM1	YGR150C	TBS1	P38114	1094 aa		3.78	□□□□□ -1.8
CCM1	YGR150C	BIT2	P38346	545 aa		3.78	□□□□□ -1.8
CCM1	YGR150C	PAN5	P38787	379 aa		3.78	□□□□□ -1.8
CCM1	YGR150C	GZF3	P42944	551 aa	Known RBP	3.78	□□□□□ -1.8
CCM1	YGR150C	ULI1	P43604	169 aa		3.78	□□□□□ -1.8
CCM1	YGR150C	CCT8	P47079	568 aa	Known RBP	3.78	□□□□□ -1.8
CCM1	YGR150C	EIS1	Q05050	843 aa	Known RBP	3.78	□□□□□ -1.8
CCM1	YGR150C	UTP4	Q06679	776 aa	Known RBP	3.78	□□□□□ -1.8
CCM1	YGR150C	PET309	P32522	965 aa	Predicted RBP	3.77	□□□□□ -1.81
CCM1	YGR150C	DHR2	P36009	735 aa	Predicted RBP	3.77	□□□□□ -1.81
CCM1	YGR150C	YBR284W	P38150	797 aa		3.77	□□□□□ -1.81
CCM1	YGR150C	UPF3	P48412	387 aa	Known RBP	3.77	□□□□□ -1.81
CCM1	YGR150C	SAS4	Q04003	481 aa		3.77	□□□□□ -1.81
CCM1	YGR150C	YLR257W	Q06146	321 aa	Known RBP	3.77	□□□□□ -1.81
CCM1	YGR150C	BRE4	Q07660	1125 aa		3.77	□□□□□ -1.81
CCM1	YGR150C	RSC58	Q07979	502 aa		3.77	□□□□□ -1.81
CCM1	YGR150C	PGC1	Q08959	321 aa		3.77	□□□□□ -1.81
CCM1	YGR150C	YPL066W	Q12194	479 aa		3.77	□□□□□ -1.81
CCM1	YGR150C	RGP1	P16664	663 aa		3.77	□□□□□ -1.81
CCM1	YGR150C	ACE2	P21192	770 aa		3.77	□□□□□ -1.81
CCM1	YGR150C	RAD16	P31244	790 aa		3.77	□□□□□ -1.81
CCM1	YGR150C	DOM34	P33309	386 aa		3.77	□□□□□ -1.81
CCM1	YGR150C	PSY4	P38193	441 aa		3.77	□□□□□ -1.81
CCM1	YGR150C	CCT3	P39077	534 aa	Known RBP	3.77	□□□□□ -1.81
CCM1	YGR150C	QDR2	P40474	542 aa		3.77	□□□□□ -1.81
CCM1	YGR150C	SAP155	P43612	1002 aa		3.77	□□□□□ -1.81
CCM1	YGR150C	PEX29	Q03370	554 aa		3.77	□□□□□ -1.81
CCM1	YGR150C	YDR341C	Q05506	607 aa	Known RBP	3.77	□□□□□ -1.81
CCM1	YGR150C	SGD1	Q06132	899 aa		3.77	□□□□□ -1.81
CCM1	YGR150C	RKM4	Q12504	494 aa		3.77	□□□□□ -1.81
CCM1	YGR150C	MSD1	P15179	658 aa	Known RBP	3.76	□□□□□ -1.81
CCM1	YGR150C	FUR1	P18562	216 aa	Known RBP	3.76	□□□□□ -1.81
CCM1	YGR150C	FBP26	P32604	452 aa		3.76	□□□□□ -1.81
CCM1	YGR150C	SCT1	P32784	759 aa		3.76	□□□□□ -1.81
CCM1	YGR150C	YKL107W	P34251	309 aa		3.76	□□□□□ -1.81
CCM1	YGR150C	ECM2	P38241	364 aa	Known RBP	3.76	□□□□□ -1.81
CCM1	YGR150C	LRP1	P38801	184 aa	Known RBP	3.76	□□□□□ -1.81
CCM1	YGR150C	YGL176C	P46945	554 aa		3.76	□□□□□ -1.81
CCM1	YGR150C	MNN11	P46985	422 aa	Known RBP	3.76	□□□□□ -1.81
CCM1	YGR150C	ENT3	P47160	408 aa		3.76	□□□□□ -1.81
CCM1	YGR150C	YML6	P51998	286 aa		3.76	□□□□□ -1.81
CCM1	YGR150C	TIF35	Q04067	274 aa	Known RBP	3.76	□□□□□ -1.81
CCM1	YGR150C	TAF11	Q04226	346 aa		3.76	□□□□□ -1.81
CCM1	YGR150C	TDA9	Q04545	1251 aa		3.76	□□□□□ -1.81
CCM1	YGR150C	YLR287C	Q05881	355 aa		3.76	□□□□□ -1.81
CCM1	YGR150C	ISA1	Q07821	250 aa	Predicted RBP	3.76	□□□□□ -1.81
CCM1	YGR150C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	3.76	□□□□□ -1.81	not detected
CCM1	YGR150C	APP1	P53933	587 aa		3.76	□□□□□ -1.81
CCM1	YGR150C	PEX13	P80667	386 aa		3.76	□□□□□ -1.81
CCM1	YGR150C	ROD1	Q02805	837 aa		3.76	□□□□□ -1.81
CCM1	YGR150C	NOG1	Q02892	647 aa	Known RBP	3.76	□□□□□ -1.81
CCM1	YGR150C	ARA2	Q04212	335 aa		3.76	□□□□□ -1.81
CCM1	YGR150C	YOL114C	Q12322	202 aa		3.76	□□□□□ -1.81
CCM1	YGR150C	DPH6	Q12429	685 aa		3.76	□□□□□ -1.81
CCM1	YGR150C	HSH49	Q99181	213 aa	Predicted RBP	3.76	□□□□□ -1.81
CCM1	YGR150C	SSM4	P40318	1319 aa		3.75	□□□□□ -1.81
CCM1	YGR150C	YER152C	P10356	443 aa		3.75	□□□□□ -1.81
CCM1	YGR150C	MUD2	P36084	527 aa	Known RBP	3.75	□□□□□ -1.81
CCM1	YGR150C	UBS1	P38290	277 aa		3.75	□□□□□ -1.81
CCM1	YGR150C	PCM1	P38628	557 aa	Known RBP	3.75	□□□□□ -1.81
CCM1	YGR150C	YHR218W	P38899	603 aa		3.75	□□□□□ -1.81
CCM1	YGR150C	MXR1	P40029	184 aa		3.75	□□□□□ -1.81
CCM1	YGR150C	ALG2	P43636	503 aa		3.75	□□□□□ -1.81
CCM1	YGR150C	RBG2	P53295	368 aa	Known RBP	3.75	□□□□□ -1.81
CCM1	YGR150C	YAP1802	P53309	568 aa		3.75	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 11.2 ms