RNA–Protein interactions for RNA: YDR471W

RPL27B, Transcript of Ribosomal 60S subunit protein L27B, yeast

Gene RPL27B, Length 411 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPL27B	YDR471W	ADY3	Q07732	790 aa		4.24	□□□□□ -1.73
RPL27B	YDR471W	OAR1	P35731	278 aa		4.23	□□□□□ -1.73
RPL27B	YDR471W	UGA2	P38067	497 aa		4.23	□□□□□ -1.73
RPL27B	YDR471W	MOH1	P38191	138 aa		4.23	□□□□□ -1.73
RPL27B	YDR471W	MXR1	P40029	184 aa		4.23	□□□□□ -1.73
RPL27B	YDR471W	EXG2	P52911	562 aa		4.23	□□□□□ -1.73
RPL27B	YDR471W	BI4	P03879	638 aa		4.22	□□□□□ -1.73
RPL27B	YDR471W	HIS5	P07172	385 aa		4.22	□□□□□ -1.73
RPL27B	YDR471W	HRR25	P29295	494 aa	Known RBP	4.22	□□□□□ -1.73
RPL27B	YDR471W	RRT14	P40470	206 aa		4.22	□□□□□ -1.73
RPL27B	YDR471W	IOC3	P43596	787 aa		4.22	□□□□□ -1.73
RPL27B	YDR471W	HFM1	P51979	1187 aa		4.22	□□□□□ -1.73
RPL27B	YDR471W	RAD2	P07276	1031 aa		4.21	□□□□□ -1.74
RPL27B	YDR471W	POA1	P38218	177 aa		4.21	□□□□□ -1.74
RPL27B	YDR471W	CHA4	P43634	648 aa		4.21	□□□□□ -1.74
RPL27B	YDR471W	MRL1	Q06815	381 aa		4.21	□□□□□ -1.74
RPL27B	YDR471W	RPL11A	P0C0W9	174 aa	Known RBP	4.2	□□□□□ -1.74
RPL27B	YDR471W	PFK1	P16861	987 aa	Known RBP	4.2	□□□□□ -1.74
RPL27B	YDR471W	DBP2	P24783	546 aa	Known RBP	4.2	□□□□□ -1.74
RPL27B	YDR471W	AIM39	Q08223	395 aa		4.2	□□□□□ -1.74
RPL27B	YDR471W	ACM1	Q08981	209 aa		4.2	□□□□□ -1.74
RPL27B	YDR471W	RPL11B	Q3E757	174 aa	Predicted RBP	4.2	□□□□□ -1.74
RPL27B	YDR471W	GCR1	P07261	785 aa		4.19	□□□□□ -1.74
RPL27B	YDR471W	SLA2	P33338	968 aa		4.19	□□□□□ -1.74
RPL27B	YDR471W	ZRG8	P40021	1076 aa		4.19	□□□□□ -1.74
RPL27B	YDR471W	XYL2	Q07993	356 aa		4.19	□□□□□ -1.74
RPL27B	YDR471W	KCS1	Q12494	1050 aa		4.19	□□□□□ -1.74
RPL27B	YDR471W	CYC8	P14922	966 aa		4.18	□□□□□ -1.74
RPL27B	YDR471W	GEM1	P39722	662 aa		4.18	□□□□□ -1.74
RPL27B	YDR471W	UBA2	P52488	636 aa		4.18	□□□□□ -1.74
RPL27B	YDR471W	GNT1	Q12096	491 aa		4.18	□□□□□ -1.74
RPL27B	YDR471W	ENA1	P13587	1091 aa		4.17	□□□□□ -1.74
RPL27B	YDR471W	ENA2	Q01896	1091 aa		4.17	□□□□□ -1.74
RPL27B	YDR471W	TIF35	Q04067	274 aa	Known RBP	4.17	□□□□□ -1.74
RPL27B	YDR471W	ENA5	Q12691	1091 aa		4.17	□□□□□ -1.74
RPL27B	YDR471W	RER2	P35196	286 aa		4.16	□□□□□ -1.74
RPL27B	YDR471W	MCM7	P38132	845 aa		4.16	□□□□□ -1.74
RPL27B	YDR471W	PNT1	P38969	423 aa		4.16	□□□□□ -1.74
RPL27B	YDR471W	RPS26A	P39938	119 aa	Known RBP	4.16	□□□□□ -1.74
RPL27B	YDR471W	RPS26B	P39939	119 aa	Known RBP	4.16	□□□□□ -1.74
RPL27B	YDR471W	MTC3	P53077	123 aa		4.16	□□□□□ -1.74
RPL27B	YDR471W	LAS17	Q12446	633 aa		4.16	□□□□□ -1.74
RPL27B	YDR471W	THS1	P04801	734 aa	Known RBP	4.15	□□□□□ -1.75
RPL27B	YDR471W	SEC20	P28791	383 aa		4.14	□□□□□ -1.75
RPL27B	YDR471W	YAP1801	P38856	637 aa		4.14	□□□□□ -1.75
RPL27B	YDR471W	IPL1	P38991	367 aa		4.14	□□□□□ -1.75
RPL27B	YDR471W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
RPL27B	YDR471W	ENB1	Q08299	606 aa		4.14	□□□□□ -1.75
RPL27B	YDR471W	RPP2A	P05319	106 aa	Known RBP	4.13	□□□□□ -1.75
RPL27B	YDR471W	BUL1	P48524	976 aa		4.13	□□□□□ -1.75
RPL27B	YDR471W	CDA1	Q06702	301 aa		4.13	□□□□□ -1.75
RPL27B	YDR471W	YLR040C	Q07988	224 aa		4.13	□□□□□ -1.75
RPL27B	YDR471W	EFT1	P32324	842 aa	Known RBP	4.12	□□□□□ -1.75
RPL27B	YDR471W	YGR012W	P53206	393 aa		4.12	□□□□□ -1.75
RPL27B	YDR471W	YOL073C	Q08232	322 aa		4.12	□□□□□ -1.75
RPL27B	YDR471W	NPC2	Q12408	173 aa		4.12	□□□□□ -1.75
RPL27B	YDR471W	SPE1	P08432	466 aa		4.11	□□□□□ -1.75
RPL27B	YDR471W	MCM2	P29469	868 aa		4.11	□□□□□ -1.75
RPL27B	YDR471W	ATF1	P40353	525 aa		4.11	□□□□□ -1.75
RPL27B	YDR471W	QRI1	P43123	477 aa	Known RBP	4.11	□□□□□ -1.75
RPL27B	YDR471W	TMN2	Q04562	672 aa		4.11	□□□□□ -1.75
RPL27B	YDR471W	SPP382	Q06411	708 aa	Predicted RBP	4.11	□□□□□ -1.75
RPL27B	YDR471W	OSW2	Q12202	724 aa		4.11	□□□□□ -1.75
RPL27B	YDR471W	NCS6	P53088	359 aa		4.1	□□□□□ -1.75
RPL27B	YDR471W	KAR4	P25583	335 aa		4.09	□□□□□ -1.75
RPL27B	YDR471W	RAD27	P26793	382 aa		4.09	□□□□□ -1.75
RPL27B	YDR471W	SRP101	P32916	621 aa		4.09	□□□□□ -1.75
RPL27B	YDR471W	YKL151C	P36059	337 aa		4.09	□□□□□ -1.75
RPL27B	YDR471W	SUL1	P38359	859 aa		4.09	□□□□□ -1.75
RPL27B	YDR471W	URM1	P40554	99 aa	Predicted RBP	4.09	□□□□□ -1.75
RPL27B	YDR471W	BDF2	Q07442	638 aa		4.09	□□□□□ -1.75
RPL27B	YDR471W	RTT10	Q08924	1013 aa		4.09	□□□□□ -1.75
RPL27B	YDR471W	YPL066W	Q12194	479 aa		4.08	□□□□□ -1.76
RPL27B	YDR471W	ECM21	P38167	1117 aa	Known RBP	4.07	□□□□□ -1.76
RPL27B	YDR471W	CCC2	P38995	1004 aa		4.07	□□□□□ -1.76
RPL27B	YDR471W	STU2	P46675	888 aa		4.07	□□□□□ -1.76
RPL27B	YDR471W	STB4	P50104	949 aa		4.07	□□□□□ -1.76
RPL27B	YDR471W	SPR28	Q04921	423 aa		4.07	□□□□□ -1.76
RPL27B	YDR471W	WHI4	Q07655	649 aa	Known RBP	4.07	□□□□□ -1.76
RPL27B	YDR471W	MDM38	Q08179	573 aa		4.07	□□□□□ -1.76
RPL27B	YDR471W	MCH5	Q08777	521 aa		4.07	□□□□□ -1.76
RPL27B	YDR471W	HSF1	P10961	833 aa		4.06	□□□□□ -1.76
RPL27B	YDR471W	KTR4	P38131	464 aa		4.06	□□□□□ -1.76
RPL27B	YDR471W	SNM1	P40993	198 aa		4.06	□□□□□ -1.76
RPL27B	YDR471W	PSP2	P50109	593 aa	Known RBP	4.06	□□□□□ -1.76
RPL27B	YDR471W	LGE1	Q02796	332 aa	Known RBP	4.06	□□□□□ -1.76
RPL27B	YDR471W	SEN54	Q02825	467 aa	Predicted RBP	4.06	□□□□□ -1.76
RPL27B	YDR471W	HRQ1	Q05549	1077 aa		4.06	□□□□□ -1.76
RPL27B	YDR471W	OMS1	Q06668	471 aa		4.06	□□□□□ -1.76
RPL27B	YDR471W	GUP2	Q08929	609 aa		4.06	□□□□□ -1.76
RPL27B	YDR471W	YLL058W	Q12198	575 aa		4.06	□□□□□ -1.76
RPL27B	YDR471W	ERG4	P25340	473 aa		4.05	□□□□□ -1.76
RPL27B	YDR471W	LYP1	P32487	611 aa		4.05	□□□□□ -1.76
RPL27B	YDR471W	GIC1	P38785	314 aa		4.05	□□□□□ -1.76
RPL27B	YDR471W	SRT1	Q03175	343 aa		4.05	□□□□□ -1.76
RPL27B	YDR471W	IRC10	Q08118	586 aa		4.05	□□□□□ -1.76
RPL27B	YDR471W	TMA46	Q12000	345 aa	Known RBP	4.05	□□□□□ -1.76
RPL27B	YDR471W	TRP2	P00899	507 aa	Known RBP	4.04	□□□□□ -1.76
RPL27B	YDR471W	INO1	P11986	533 aa		4.04	□□□□□ -1.76
RPL27B	YDR471W	FUN30	P31380	1131 aa		4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 63.7 ms