RNA–Protein interactions for RNA: YDR312W

SSF2, Transcript of Protein required for ribosomal large subunit maturation, yeast

Gene SSF2, Length 1,362 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSF2	YDR312W	SPT20	P50875	604 aa		4.14	□□□□□ -1.75
SSF2	YDR312W	YGR053C	P53234	283 aa		4.14	□□□□□ -1.75
SSF2	YDR312W	CWC24	P53769	259 aa		4.14	□□□□□ -1.75
SSF2	YDR312W	ALD6	P54115	500 aa	Known RBP	4.14	□□□□□ -1.75
SSF2	YDR312W	PLB2	Q03674	706 aa		4.14	□□□□□ -1.75
SSF2	YDR312W	ROT1	Q03691	256 aa		4.14	□□□□□ -1.75
SSF2	YDR312W	SPP382	Q06411	708 aa	Predicted RBP	4.14	□□□□□ -1.75
SSF2	YDR312W	ACM1	Q08981	209 aa		4.14	□□□□□ -1.75
SSF2	YDR312W	RIB2	Q12362	591 aa	Known RBP	4.14	□□□□□ -1.75
SSF2	YDR312W	RKM4	Q12504	494 aa		4.14	□□□□□ -1.75
SSF2	YDR312W	YLR358C	O13565	187 aa		4.14	□□□□□ -1.75
SSF2	YDR312W	INO1	P11986	533 aa		4.14	□□□□□ -1.75
SSF2	YDR312W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
SSF2	YDR312W	APL1	P27351	700 aa		4.14	□□□□□ -1.75
SSF2	YDR312W	SLA2	P33338	968 aa		4.14	□□□□□ -1.75
SSF2	YDR312W	MOT2	P34909	587 aa	Known RBP	4.14	□□□□□ -1.75
SSF2	YDR312W	DUS4	Q06063	367 aa		4.14	□□□□□ -1.75
SSF2	YDR312W	YPL066W	Q12194	479 aa		4.14	□□□□□ -1.75
SSF2	YDR312W	BI4	P03879	638 aa		4.13	□□□□□ -1.75
SSF2	YDR312W	THS1	P04801	734 aa	Known RBP	4.13	□□□□□ -1.75
SSF2	YDR312W	ACE2	P21192	770 aa		4.13	□□□□□ -1.75
SSF2	YDR312W	RRT14	P40470	206 aa		4.13	□□□□□ -1.75
SSF2	YDR312W	CLU1	Q03690	1277 aa	Known RBP	4.13	□□□□□ -1.75
SSF2	YDR312W	SIZ1	Q04195	904 aa		4.13	□□□□□ -1.75
SSF2	YDR312W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	not detected
SSF2	YDR312W	DOM34	P33309	386 aa		4.12	□□□□□ -1.75
SSF2	YDR312W	YKL107W	P34251	309 aa		4.12	□□□□□ -1.75
SSF2	YDR312W	YGL176C	P46945	554 aa		4.12	□□□□□ -1.75
SSF2	YDR312W	SPO20	Q04359	397 aa		4.12	□□□□□ -1.75
SSF2	YDR312W	YLR225C	Q05948	407 aa	Known RBP	4.12	□□□□□ -1.75
SSF2	YDR312W	ESC2	Q06340	456 aa		4.12	□□□□□ -1.75
SSF2	YDR312W	PRI2	P20457	528 aa		4.11	□□□□□ -1.75
SSF2	YDR312W	SIP5	P40210	489 aa	Known RBP	4.11	□□□□□ -1.75
SSF2	YDR312W	PBP1	P53297	722 aa	Known RBP	4.11	□□□□□ -1.75
SSF2	YDR312W	MSC2	Q03455	724 aa		4.11	□□□□□ -1.75
SSF2	YDR312W	YKL069W	P36088	180 aa		4.1	□□□□□ -1.75
SSF2	YDR312W	TAT2	P38967	592 aa		4.1	□□□□□ -1.75
SSF2	YDR312W	HFM1	P51979	1187 aa		4.1	□□□□□ -1.75
SSF2	YDR312W	RXT3	Q07458	294 aa		4.1	□□□□□ -1.75
SSF2	YDR312W	OPI10	Q08202	246 aa		4.1	□□□□□ -1.75
SSF2	YDR312W	GPB1	Q08886	897 aa		4.1	□□□□□ -1.75
SSF2	YDR312W	FAL1	Q12099	399 aa	Known RBP	4.1	□□□□□ -1.75
SSF2	YDR312W	CDC6	P09119	513 aa		4.09	□□□□□ -1.75
SSF2	YDR312W	CDC20	P26309	610 aa		4.09	□□□□□ -1.75
SSF2	YDR312W	ABD1	P32783	436 aa	Predicted RBP	4.09	□□□□□ -1.75
SSF2	YDR312W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
SSF2	YDR312W	SNF7	P39929	240 aa	Known RBP	4.09	□□□□□ -1.75
SSF2	YDR312W	MTC3	P53077	123 aa		4.09	□□□□□ -1.75
SSF2	YDR312W	ACK1	Q07622	623 aa	Predicted RBP	4.09	□□□□□ -1.75
SSF2	YDR312W	CTS1	P29029	562 aa		4.08	□□□□□ -1.76
SSF2	YDR312W	SHM2	P37291	469 aa	Known RBP	4.08	□□□□□ -1.76
SSF2	YDR312W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
SSF2	YDR312W	YKL151C	P36059	337 aa		4.07	□□□□□ -1.76
SSF2	YDR312W	KRI1	P42846	591 aa	Known RBP	4.07	□□□□□ -1.76
SSF2	YDR312W	GTF1	P53260	183 aa	Predicted RBP	4.07	□□□□□ -1.76
SSF2	YDR312W	VPS62	P53285	467 aa		4.07	□□□□□ -1.76
SSF2	YDR312W	SSF2	Q12153	453 aa	Predicted RBP	4.07	□□□□□ -1.76
SSF2	YDR312W	YLL058W	Q12198	575 aa		4.07	□□□□□ -1.76
SSF2	YDR312W	AGP1	P25376	633 aa		4.06	□□□□□ -1.76
SSF2	YDR312W	HRQ1	Q05549	1077 aa		4.06	□□□□□ -1.76
SSF2	YDR312W	XYL2	Q07993	356 aa		4.06	□□□□□ -1.76
SSF2	YDR312W	MDM38	Q08179	573 aa		4.06	□□□□□ -1.76
SSF2	YDR312W	HMI1	Q12039	706 aa		4.06	□□□□□ -1.76
SSF2	YDR312W	OSW2	Q12202	724 aa		4.06	□□□□□ -1.76
SSF2	YDR312W	EMC1	P25574	760 aa		4.05	□□□□□ -1.76
SSF2	YDR312W	SBA1	P28707	216 aa	Known RBP	4.05	□□□□□ -1.76
SSF2	YDR312W	LST4	P34239	828 aa		4.05	□□□□□ -1.76
SSF2	YDR312W	SPF1	P39986	1215 aa	Known RBP	4.05	□□□□□ -1.76
SSF2	YDR312W	MND2	P40577	368 aa		4.05	□□□□□ -1.76
SSF2	YDR312W	GCV2	P49095	1034 aa		4.05	□□□□□ -1.76
SSF2	YDR312W	YAP6	Q03935	383 aa		4.05	□□□□□ -1.76
SSF2	YDR312W	WRS1	Q12109	432 aa	Known RBP	4.05	□□□□□ -1.76
SSF2	YDR312W	STE11	P23561	717 aa		4.04	□□□□□ -1.76
SSF2	YDR312W	GRX1	P25373	110 aa	Known RBP	4.04	□□□□□ -1.76
SSF2	YDR312W	VBA5	P36172	582 aa		4.04	□□□□□ -1.76
SSF2	YDR312W	YAP1801	P38856	637 aa		4.04	□□□□□ -1.76
SSF2	YDR312W	MBP1	P39678	833 aa		4.04	□□□□□ -1.76
SSF2	YDR312W	ZRG8	P40021	1076 aa		4.04	□□□□□ -1.76
SSF2	YDR312W	YLR224W	Q05947	369 aa		4.04	□□□□□ -1.76
SSF2	YDR312W	TMA10	Q06177	86 aa		4.04	□□□□□ -1.76
SSF2	YDR312W	TDA5	Q06417	326 aa	Known RBP	4.04	□□□□□ -1.76
SSF2	YDR312W	TPO1	Q07824	586 aa		4.04	□□□□□ -1.76
SSF2	YDR312W	NOP12	Q08208	459 aa	Known RBP	4.04	□□□□□ -1.76
SSF2	YDR312W	ENA1	P13587	1091 aa		4.03	□□□□□ -1.76
SSF2	YDR312W	STE5	P32917	917 aa		4.03	□□□□□ -1.76
SSF2	YDR312W	POA1	P38218	177 aa		4.03	□□□□□ -1.76
SSF2	YDR312W	SAH1	P39954	449 aa	Known RBP	4.03	□□□□□ -1.76
SSF2	YDR312W	MNN10	P50108	393 aa	Known RBP	4.03	□□□□□ -1.76
SSF2	YDR312W	ENA2	Q01896	1091 aa		4.03	□□□□□ -1.76
SSF2	YDR312W	SRT1	Q03175	343 aa		4.03	□□□□□ -1.76
SSF2	YDR312W	GSF2	Q04697	403 aa	Known RBP	4.03	□□□□□ -1.76
SSF2	YDR312W	ADY3	Q07732	790 aa		4.03	□□□□□ -1.76
SSF2	YDR312W	ENA5	Q12691	1091 aa		4.03	□□□□□ -1.76
SSF2	YDR312W	TCB3	Q03640	1545 aa	Known RBP	4.03	□□□□□ -1.76
SSF2	YDR312W	FUN30	P31380	1131 aa		4.02	□□□□□ -1.77
SSF2	YDR312W	GIC1	P38785	314 aa		4.02	□□□□□ -1.77
SSF2	YDR312W	MET12	P46151	657 aa		4.02	□□□□□ -1.77
SSF2	YDR312W	MCM6	P53091	1017 aa	Known RBP	4.02	□□□□□ -1.77
SSF2	YDR312W	SHE9	Q04172	456 aa		4.02	□□□□□ -1.77
SSF2	YDR312W	TUB2	P02557	457 aa	Known RBP	4.02	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 25.7 ms