RNA–Protein interactions for RNA: YBR175W

SWD3, Transcript of Essential subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SWD3, Length 948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD3YBR175W YEF3P16521 1044 aaKnown RBP3.58□□□□□ -1.84
SWD3YBR175W PUF4P25339 888 aaKnown RBP RIP-Chip data3.58□□□□□ -1.84not detected
SWD3YBR175W HIR1P32479 840 aa3.58□□□□□ -1.84
SWD3YBR175W GDH3P39708 457 aa3.58□□□□□ -1.84
SWD3YBR175W GEM1P39722 662 aa3.58□□□□□ -1.84
SWD3YBR175W NOC2P39744 710 aaKnown RBP3.58□□□□□ -1.84
SWD3YBR175W UBP5P39944 805 aa3.58□□□□□ -1.84
SWD3YBR175W ALR2P43553 858 aa3.58□□□□□ -1.84
SWD3YBR175W MAL11P53048 616 aa3.58□□□□□ -1.84
SWD3YBR175W YGR021WP53212 290 aa3.58□□□□□ -1.84
SWD3YBR175W UTP8P53276 713 aaKnown RBP3.58□□□□□ -1.84
SWD3YBR175W UME1Q03010 460 aa3.58□□□□□ -1.84
SWD3YBR175W YLR225CQ05948 407 aaKnown RBP3.58□□□□□ -1.84
SWD3YBR175W HDA2Q06629 674 aa3.58□□□□□ -1.84
SWD3YBR175W YDL124WQ07551 312 aaKnown RBP3.58□□□□□ -1.84
SWD3YBR175W THI73Q07904 523 aa3.58□□□□□ -1.84
SWD3YBR175W PIF1P07271 859 aa3.57□□□□□ -1.84
SWD3YBR175W SEC23P15303 768 aaKnown RBP3.57□□□□□ -1.84
SWD3YBR175W PRP9P19736 530 aaKnown RBP3.57□□□□□ -1.84
SWD3YBR175W RER2P35196 286 aa3.57□□□□□ -1.84
SWD3YBR175W YKL077WP36081 392 aa3.57□□□□□ -1.84
SWD3YBR175W PEX28P38848 579 aa3.57□□□□□ -1.84
SWD3YBR175W HXT13P39924 564 aa3.57□□□□□ -1.84
SWD3YBR175W VPS27P40343 622 aaKnown RBP3.57□□□□□ -1.84
SWD3YBR175W YGL140CP53120 1219 aa3.57□□□□□ -1.84
SWD3YBR175W GPG1P53130 126 aa3.57□□□□□ -1.84
SWD3YBR175W HXT17P53631 564 aa3.57□□□□□ -1.84
SWD3YBR175W YNL193WP53870 558 aa3.57□□□□□ -1.84
SWD3YBR175W COG6P53959 839 aa3.57□□□□□ -1.84
SWD3YBR175W HXT15P54854 567 aa3.57□□□□□ -1.84
SWD3YBR175W GIR2Q03768 265 aaPredicted RBP3.57□□□□□ -1.84
SWD3YBR175W GIC2Q06648 383 aa3.57□□□□□ -1.84
SWD3YBR175W FAP7Q12055 197 aaPredicted RBP3.57□□□□□ -1.84
SWD3YBR175W TAF13P11747 167 aa3.56□□□□□ -1.84
SWD3YBR175W MEF1P25039 761 aa3.56□□□□□ -1.84
SWD3YBR175W RNQ1P25367 405 aa3.56□□□□□ -1.84
SWD3YBR175W RPN12P32496 274 aa3.56□□□□□ -1.84
SWD3YBR175W MTC2P34246 357 aa3.56□□□□□ -1.84
SWD3YBR175W MOT2P34909 587 aaKnown RBP3.56□□□□□ -1.84
SWD3YBR175W EXO5P38289 585 aa3.56□□□□□ -1.84
SWD3YBR175W IES5P40060 125 aa3.56□□□□□ -1.84
SWD3YBR175W PEA2P40091 420 aa3.56□□□□□ -1.84
SWD3YBR175W MTR4P47047 1073 aaKnown RBP3.56□□□□□ -1.84
SWD3YBR175W SIW14P53965 281 aa3.56□□□□□ -1.84
SWD3YBR175W TGL2P54857 326 aa3.56□□□□□ -1.84
SWD3YBR175W YMR074CQ04773 145 aa3.56□□□□□ -1.84
SWD3YBR175W ENT2Q05785 613 aa3.56□□□□□ -1.84
SWD3YBR175W HEM13P11353 328 aaKnown RBP3.55□□□□□ -1.84
SWD3YBR175W SST2P11972 698 aaKnown RBP3.55□□□□□ -1.84
SWD3YBR175W INO1P11986 533 aa3.55□□□□□ -1.84
SWD3YBR175W PGI1P12709 554 aaKnown RBP3.55□□□□□ -1.84
SWD3YBR175W LRG1P35688 1017 aa3.55□□□□□ -1.84
SWD3YBR175W YBR071WP38243 211 aa3.55□□□□□ -1.84
SWD3YBR175W REI1P38344 393 aaPredicted RBP3.55□□□□□ -1.84
SWD3YBR175W CCC2P38995 1004 aa3.55□□□□□ -1.84
SWD3YBR175W GPP1P41277 250 aaKnown RBP3.55□□□□□ -1.84
SWD3YBR175W PEX14P53112 341 aa3.55□□□□□ -1.84
SWD3YBR175W SDA1P53313 767 aaKnown RBP3.55□□□□□ -1.84
SWD3YBR175W YNL034WP53963 612 aa3.55□□□□□ -1.84
SWD3YBR175W YNL018CP53976 612 aa3.55□□□□□ -1.84
SWD3YBR175W UBX4P54730 416 aa3.55□□□□□ -1.84
SWD3YBR175W PEX13P80667 386 aa3.55□□□□□ -1.84
SWD3YBR175W SDH1Q00711 640 aa3.55□□□□□ -1.84
SWD3YBR175W NPL3Q01560 414 aaKnown RBP RIP-Chip data3.55□□□□□ -1.84not detected
SWD3YBR175W DOT1Q04089 582 aaKnown RBP3.55□□□□□ -1.84
SWD3YBR175W YLR001CQ07895 862 aa3.55□□□□□ -1.84
SWD3YBR175W MPD2Q99316 277 aa3.55□□□□□ -1.84
SWD3YBR175W TOM70P07213 617 aaKnown RBP3.54□□□□□ -1.84
SWD3YBR175W GCD1P09032 578 aaPredicted RBP3.54□□□□□ -1.84
SWD3YBR175W TY1A-LR4P0C2I8 440 aaKnown RBP3.54□□□□□ -1.84
SWD3YBR175W TY1A-DR6P0CX70 440 aa3.54□□□□□ -1.84
SWD3YBR175W TY1A-ER1P0CX71 440 aa3.54□□□□□ -1.84
SWD3YBR175W TY1A-LR2P0CX72 440 aa3.54□□□□□ -1.84
SWD3YBR175W TY1A-PLP0CX73 440 aa3.54□□□□□ -1.84
SWD3YBR175W TY1A-JR1P0CX74 440 aa3.54□□□□□ -1.84
SWD3YBR175W TY1A-LR3P0CX75 440 aa3.54□□□□□ -1.84
SWD3YBR175W TY1A-ML2P0CX76 440 aa3.54□□□□□ -1.84
SWD3YBR175W EUG1P32474 517 aa3.54□□□□□ -1.84
SWD3YBR175W MKK2P32491 506 aa3.54□□□□□ -1.84
SWD3YBR175W MFT1P33441 392 aaKnown RBP3.54□□□□□ -1.84
SWD3YBR175W SEG2P34250 1132 aa3.54□□□□□ -1.84
SWD3YBR175W YKL222CP35995 705 aa3.54□□□□□ -1.84
SWD3YBR175W DSS1P39112 969 aa3.54□□□□□ -1.84
SWD3YBR175W MBP1P39678 833 aa3.54□□□□□ -1.84
SWD3YBR175W ENT3P47160 408 aa3.54□□□□□ -1.84
SWD3YBR175W ROD1Q02805 837 aa3.54□□□□□ -1.84
SWD3YBR175W TRE2Q08693 809 aa3.54□□□□□ -1.84
SWD3YBR175W TY1A-GR1Q12085 440 aa3.54□□□□□ -1.84
SWD3YBR175W TY1A-PR3Q6Q5H1 440 aaKnown RBP3.54□□□□□ -1.84
SWD3YBR175W MDM12Q92328 271 aa3.54□□□□□ -1.84
SWD3YBR175W TY1A-OLQ92392 440 aaKnown RBP3.54□□□□□ -1.84
SWD3YBR175W TOP3P13099 656 aa3.53□□□□□ -1.84
SWD3YBR175W MSH3P25336 1018 aa3.53□□□□□ -1.84
SWD3YBR175W YKL107WP34251 309 aa3.53□□□□□ -1.84
SWD3YBR175W TYS1P36421 394 aaKnown RBP3.53□□□□□ -1.84
SWD3YBR175W BAP2P38084 609 aa3.53□□□□□ -1.84
SWD3YBR175W VID27P40157 782 aa3.53□□□□□ -1.84
SWD3YBR175W SEC26P41810 973 aaKnown RBP3.53□□□□□ -1.84
SWD3YBR175W ECL1P48235 211 aa3.53□□□□□ -1.84
SWD3YBR175W SPC105P53148 917 aa3.53□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 31.5 ms