RNA–Protein interactions for RNA: ENST00000641828.1

CASC19-260, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 2,001 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-260ENST00000641828 PTPN23Q9H3S7 1636 aa7.57□□□□□ -1.2
CASC19-260ENST00000641828 ATP2B4P23634 1241 aa7.57□□□□□ -1.2
CASC19-260ENST00000641828 MMP16P51512 607 aa7.57□□□□□ -1.2
CASC19-260ENST00000641828 LSM11P83369 360 aaKnown RBP eCLIP7.57□□□□□ -1.2
CASC19-260ENST00000641828 DPYDQ12882 1025 aa7.57□□□□□ -1.2
CASC19-260ENST00000641828 SWI5Q1ZZU3 235 aa7.57□□□□□ -1.2
CASC19-260ENST00000641828 TRAF7Q6Q0C0 670 aa7.57□□□□□ -1.2
CASC19-260ENST00000641828 FAM160A2Q8N612 972 aaPredicted RBP7.57□□□□□ -1.2
CASC19-260ENST00000641828 ARHGAP9Q9BRR9 750 aa7.57□□□□□ -1.2
CASC19-260ENST00000641828 ZNF142P52746 1687 aaPredicted RBP7.57□□□□□ -1.2
CASC19-260ENST00000641828 CLDN10P78369 228 aa7.56□□□□□ -1.2
CASC19-260ENST00000641828 ZNF594Q96JF6 807 aaPredicted RBP7.56□□□□□ -1.2
CASC19-260ENST00000641828 SPSB2Q99619 263 aa7.56□□□□□ -1.2
CASC19-260ENST00000641828 PRDM9Q9NQV7 894 aa7.56□□□□□ -1.2
CASC19-260ENST00000641828 NPATQ14207 1427 aa7.56□□□□□ -1.2
CASC19-260ENST00000641828 MYO3AQ8NEV4 1616 aa7.56□□□□□ -1.2
CASC19-260ENST00000641828 SOWAHDA6NJG2 315 aa7.56□□□□□ -1.2
CASC19-260ENST00000641828 SERPINB4P48594 390 aa7.56□□□□□ -1.2
CASC19-260ENST00000641828 TRIM50Q86XT4 487 aa7.56□□□□□ -1.2
CASC19-260ENST00000641828 STAC3Q96MF2 364 aa7.56□□□□□ -1.2
CASC19-260ENST00000641828 RCAN3Q9UKA8 241 aa7.56□□□□□ -1.2
CASC19-260ENST00000641828 CENPJQ9HC77 1338 aaPredicted RBP7.56□□□□□ -1.2
CASC19-260ENST00000641828 RBM47A0AV96 593 aaKnown RBP7.55□□□□□ -1.2
CASC19-260ENST00000641828 UNCXA6NJT0 531 aa7.55□□□□□ -1.2
CASC19-260ENST00000641828 ATP1A2P50993 1020 aa7.55□□□□□ -1.2
CASC19-260ENST00000641828 TSGA10IPQ3SY00 556 aa7.55□□□□□ -1.2
CASC19-260ENST00000641828 DNAJC14Q6Y2X3 702 aaPredicted RBP7.55□□□□□ -1.2
CASC19-260ENST00000641828 ZBTB33Q86T24 672 aa7.55□□□□□ -1.2
CASC19-260ENST00000641828 PNISRQ8TF01 805 aaKnown RBP7.55□□□□□ -1.2
CASC19-260ENST00000641828 DNAAF2Q9NVR5 837 aaKnown RBP7.55□□□□□ -1.2
CASC19-260ENST00000641828 CEP170BQ9Y4F5 1589 aaPredicted RBP7.55□□□□□ -1.2
CASC19-260ENST00000641828 PLEKHD1A6NEE1 506 aa7.54□□□□□ -1.2
CASC19-260ENST00000641828 ERCC3P19447 782 aa7.54□□□□□ -1.2
CASC19-260ENST00000641828 PDE3BQ13370 1112 aa7.54□□□□□ -1.2
CASC19-260ENST00000641828 NOD1Q9Y239 953 aa7.54□□□□□ -1.2
CASC19-260ENST00000641828 RAPGEF6Q8TEU7 1601 aa7.54□□□□□ -1.2
CASC19-260ENST00000641828 RNF17Q9BXT8 1623 aaKnown RBP7.54□□□□□ -1.2
CASC19-260ENST00000641828 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.54□□□□□ -1.2
CASC19-260ENST00000641828 FMN1Q68DA7 1419 aa7.54□□□□□ -1.2
CASC19-260ENST00000641828 KIF7Q2M1P5 1343 aa7.54□□□□□ -1.2
CASC19-260ENST00000641828 SH3BP5LQ7L8J4 393 aa7.54□□□□□ -1.2
CASC19-260ENST00000641828 WNT2BQ93097 391 aa7.54□□□□□ -1.2
CASC19-260ENST00000641828 HS3ST6Q96QI5 342 aa7.54□□□□□ -1.2
CASC19-260ENST00000641828 PDCL3Q9H2J4 239 aa7.54□□□□□ -1.2
CASC19-260ENST00000641828 MROH2AA6NES4 1674 aa7.53□□□□□ -1.2
CASC19-260ENST00000641828 AGLP35573 1532 aa7.53□□□□□ -1.2
CASC19-260ENST00000641828 IGSF3O75054 1194 aa7.53□□□□□ -1.2
CASC19-260ENST00000641828 DZIP3Q86Y13 1208 aaKnown RBP7.53□□□□□ -1.2
CASC19-260ENST00000641828 LARGE2Q8N3Y3 721 aa7.53□□□□□ -1.2
CASC19-260ENST00000641828 UNC93B1Q9H1C4 597 aa7.53□□□□□ -1.2
CASC19-260ENST00000641828 DOLKQ9UPQ8 538 aa7.53□□□□□ -1.2
CASC19-260ENST00000641828 SPATA31E1Q6ZUB1 1445 aa7.53□□□□□ -1.2
CASC19-260ENST00000641828 SCNN1AP37088 669 aa7.52□□□□□ -1.2
CASC19-260ENST00000641828 COPS2P61201 443 aa7.52□□□□□ -1.2
CASC19-260ENST00000641828 DIP2CQ9Y2E4 1556 aa7.52□□□□□ -1.21
CASC19-260ENST00000641828 NAIPQ13075 1403 aa7.52□□□□□ -1.21
CASC19-260ENST00000641828 DHX29Q7Z478 1369 aaKnown RBP7.52□□□□□ -1.21
CASC19-260ENST00000641828 POTEB3A0JP26 581 aa7.52□□□□□ -1.21
CASC19-260ENST00000641828 CALD1Q05682 793 aaKnown RBP7.52□□□□□ -1.21
CASC19-260ENST00000641828 IFFO2Q5TF58 517 aa7.52□□□□□ -1.21
CASC19-260ENST00000641828 POTEBQ6S5H4 581 aa7.52□□□□□ -1.21
CASC19-260ENST00000641828 SIX5Q8N196 739 aa7.52□□□□□ -1.21
CASC19-260ENST00000641828 C1orf216Q8TAB5 229 aa7.52□□□□□ -1.21
CASC19-260ENST00000641828 TMC1Q8TDI8 760 aa7.52□□□□□ -1.21
CASC19-260ENST00000641828 CCDC85AQ96PX6 553 aaPredicted RBP7.52□□□□□ -1.21
CASC19-260ENST00000641828 WBP1LQ9NX94 342 aa7.52□□□□□ -1.21
CASC19-260ENST00000641828 KIAA1024Q9UPX6 916 aa7.52□□□□□ -1.21
CASC19-260ENST00000641828 FGD6Q6ZV73 1430 aa7.52□□□□□ -1.21
CASC19-260ENST00000641828 LRPPRCP42704 1394 aaKnown RBP7.51□□□□□ -1.21
CASC19-260ENST00000641828 REREQ9P2R6 1566 aa7.51□□□□□ -1.21
CASC19-260ENST00000641828 DKK1O94907 266 aa7.51□□□□□ -1.21
CASC19-260ENST00000641828 OXLD1Q5BKU9 147 aa7.51□□□□□ -1.21
CASC19-260ENST00000641828 POGKQ9P215 609 aa7.51□□□□□ -1.21
CASC19-260ENST00000641828 VIRMAQ69YN4 1812 aaKnown RBP7.51□□□□□ -1.21
CASC19-260ENST00000641828 ZMYM3Q14202 1370 aa7.51□□□□□ -1.21
CASC19-260ENST00000641828 VWDEQ8N2E2 1590 aa7.51□□□□□ -1.21
CASC19-260ENST00000641828 TPM2P07951 284 aa7.51□□□□□ -1.21
CASC19-260ENST00000641828 CARD14Q9BXL6 1004 aa7.51□□□□□ -1.21
CASC19-260ENST00000641828 BIN2Q9UBW5 565 aaPredicted RBP7.51□□□□□ -1.21
CASC19-260ENST00000641828 KTN1Q86UP2 1357 aaKnown RBP7.5□□□□□ -1.21
CASC19-260ENST00000641828 LRRC7Q96NW7 1537 aa7.5□□□□□ -1.21
CASC19-260ENST00000641828 MAGEB6P1A0A0J9YX57 407 aa7.5□□□□□ -1.21
CASC19-260ENST00000641828 ZBTB7BO15156 539 aaPredicted RBP7.5□□□□□ -1.21
CASC19-260ENST00000641828 PRMT3O60678 531 aa7.5□□□□□ -1.21
CASC19-260ENST00000641828 MARSP56192 900 aaKnown RBP7.5□□□□□ -1.21
CASC19-260ENST00000641828 GTF2IP78347 998 aa7.5□□□□□ -1.21
CASC19-260ENST00000641828 NOM1Q5C9Z4 860 aaKnown RBP7.5□□□□□ -1.21
CASC19-260ENST00000641828 PTCRAQ6ISU1 281 aaPredicted RBP7.5□□□□□ -1.21
CASC19-260ENST00000641828 SH3RF1Q7Z6J0 888 aa7.5□□□□□ -1.21
CASC19-260ENST00000641828 CCDC24Q8N4L8 307 aa7.5□□□□□ -1.21
CASC19-260ENST00000641828 MIA2Q96PC5 1412 aa7.5□□□□□ -1.21
CASC19-260ENST00000641828 ZNF518AQ6AHZ1 1483 aa7.49□□□□□ -1.21
CASC19-260ENST00000641828 ABCA6Q8N139 1617 aa7.49□□□□□ -1.21
CASC19-260ENST00000641828 GOLGA6L3A6NEY3 463 aa7.49□□□□□ -1.21
CASC19-260ENST00000641828 XRCC6P12956 609 aaKnown RBP eCLIP7.49□□□□□ -1.212e-6■■■□□ 17
CASC19-260ENST00000641828 SEC13P55735 322 aa7.49□□□□□ -1.21
CASC19-260ENST00000641828 RBM10P98175 930 aaKnown RBP7.49□□□□□ -1.21
CASC19-260ENST00000641828 C8orf34Q49A92 452 aa7.49□□□□□ -1.21
CASC19-260ENST00000641828 CENPQQ7L2Z9 268 aaPredicted RBP7.49□□□□□ -1.21
CASC19-260ENST00000641828 L3MBTL2Q969R5 705 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms