RNA–Protein interactions for RNA: ENST00000641259.1

RBFOX1-224, Transcript of RNA binding fox-1 homolog 1, humanhuman

BASIC

Gene RBFOX1, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-224ENST00000641259 BRINP3Q76B58 766 aa14.4□□□□□ -0.1
RBFOX1-224ENST00000641259 PTMSP20962 102 aa14.4□□□□□ -0.1
RBFOX1-224ENST00000641259 ANKRD45Q5TZF3 282 aa14.4□□□□□ -0.1
RBFOX1-224ENST00000641259 DZIP1LQ8IYY4 767 aaKnown RBP14.4□□□□□ -0.1
RBFOX1-224ENST00000641259 MVPQ14764 893 aaKnown RBP14.4□□□□□ -0.1
RBFOX1-224ENST00000641259 MRPL50Q8N5N7 158 aaKnown RBP14.4□□□□□ -0.1
RBFOX1-224ENST00000641259 ZSCAN23Q3MJ62 389 aa14.39□□□□□ -0.11
RBFOX1-224ENST00000641259 CAMTA1Q9Y6Y1 1673 aa14.39□□□□□ -0.11
RBFOX1-224ENST00000641259 ALDH1L2Q3SY69 923 aa14.39□□□□□ -0.11
RBFOX1-224ENST00000641259 ATP2B3Q16720 1220 aa14.39□□□□□ -0.11
RBFOX1-224ENST00000641259 TMEM57Q8N5G2 664 aa14.39□□□□□ -0.11
RBFOX1-224ENST00000641259 ZSCAN20P17040 1043 aaPredicted RBP14.38□□□□□ -0.11
RBFOX1-224ENST00000641259 TNS3Q68CZ2 1445 aa14.38□□□□□ -0.11
RBFOX1-224ENST00000641259 IL17REQ8NFR9 667 aa14.38□□□□□ -0.11
RBFOX1-224ENST00000641259 IPO4Q8TEX9 1081 aaKnown RBP14.38□□□□□ -0.11
RBFOX1-224ENST00000641259 TMX1Q9H3N1 280 aa14.38□□□□□ -0.11
RBFOX1-224ENST00000641259 COL18A1P39060 1754 aa14.38□□□□□ -0.11
RBFOX1-224ENST00000641259 BAG4O95429 457 aaKnown RBP14.38□□□□□ -0.11
RBFOX1-224ENST00000641259 ANKRD24Q8TF21 1146 aa14.38□□□□□ -0.11
RBFOX1-224ENST00000641259 TRIM6-TRIM34B2RNG4 842 aa14.37□□□□□ -0.11
RBFOX1-224ENST00000641259 APPP05067 770 aa14.37□□□□□ -0.11
RBFOX1-224ENST00000641259 TRIM34Q9BYJ4 488 aa14.37□□□□□ -0.11
RBFOX1-224ENST00000641259 GDPD2Q9HCC8 539 aa14.37□□□□□ -0.11
RBFOX1-224ENST00000641259 USP25Q9UHP3 1055 aa14.37□□□□□ -0.11
RBFOX1-224ENST00000641259 LETM1O95202 739 aaPredicted RBP14.37□□□□□ -0.11
RBFOX1-224ENST00000641259 GAS2L2Q8NHY3 880 aa14.37□□□□□ -0.11
RBFOX1-224ENST00000641259 NCAPD2Q15021 1401 aa14.37□□□□□ -0.11
RBFOX1-224ENST00000641259 NPHP3Q7Z494 1330 aa14.37□□□□□ -0.11
RBFOX1-224ENST00000641259 MAP3K5Q99683 1374 aa14.36□□□□□ -0.11
RBFOX1-224ENST00000641259 LMO7Q8WWI1 1683 aa14.36□□□□□ -0.11
RBFOX1-224ENST00000641259 NOL7Q9UMY1 257 aaKnown RBP14.36□□□□□ -0.11
RBFOX1-224ENST00000641259 GNAT3A8MTJ3 354 aa14.36□□□□□ -0.11
RBFOX1-224ENST00000641259 KIF16BQ96L93 1317 aa14.36□□□□□ -0.11
RBFOX1-224ENST00000641259 BRPF1P55201 1214 aaPredicted RBP14.36□□□□□ -0.11
RBFOX1-224ENST00000641259 RTF1Q92541 710 aaKnown RBP14.36□□□□□ -0.11
RBFOX1-224ENST00000641259 SPATA31A3Q5VYP0 1347 aa14.36□□□□□ -0.11
RBFOX1-224ENST00000641259 CHMP4CQ96CF2 233 aa14.35□□□□□ -0.11
RBFOX1-224ENST00000641259 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.35□□□□□ -0.11
RBFOX1-224ENST00000641259 V9GYY5 206 aaPredicted RBP14.35□□□□□ -0.11
RBFOX1-224ENST00000641259 CHRNA2Q15822 529 aa14.35□□□□□ -0.11
RBFOX1-224ENST00000641259 GTPBP4Q9BZE4 634 aaKnown RBP14.35□□□□□ -0.11
RBFOX1-224ENST00000641259 SLAIN2Q9P270 581 aa14.35□□□□□ -0.11
RBFOX1-224ENST00000641259 ERBB3P21860 1342 aa14.35□□□□□ -0.11
RBFOX1-224ENST00000641259 FAM208AQ9UK61 1670 aaKnown RBP14.34□□□□□ -0.11
RBFOX1-224ENST00000641259 C1orf115Q9H7X2 142 aa14.34□□□□□ -0.11
RBFOX1-224ENST00000641259 LGR6Q9HBX8 967 aa14.34□□□□□ -0.11
RBFOX1-224ENST00000641259 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.34□□□□□ -0.11
RBFOX1-224ENST00000641259 VIRMAQ69YN4 1812 aaKnown RBP14.34□□□□□ -0.11
RBFOX1-224ENST00000641259 K7ELQ4 463 aaPredicted RBP14.34□□□□□ -0.11
RBFOX1-224ENST00000641259 TSPYL4Q9UJ04 414 aa14.34□□□□□ -0.11
RBFOX1-224ENST00000641259 KIF20AO95235 890 aa14.34□□□□□ -0.11
RBFOX1-224ENST00000641259 HMGN5P82970 282 aaKnown RBP14.34□□□□□ -0.11
RBFOX1-224ENST00000641259 RGS12O14924 1447 aa14.33□□□□□ -0.12
RBFOX1-224ENST00000641259 ZNF428Q96B54 188 aa14.33□□□□□ -0.12
RBFOX1-224ENST00000641259 TMEM51Q9NW97 253 aa14.33□□□□□ -0.12
RBFOX1-224ENST00000641259 KIAA0232Q92628 1395 aa14.32□□□□□ -0.12
RBFOX1-224ENST00000641259 IRX3P78415 501 aaPredicted RBP14.32□□□□□ -0.12
RBFOX1-224ENST00000641259 KLHL40Q2TBA0 621 aa14.32□□□□□ -0.12
RBFOX1-224ENST00000641259 CEMIPQ8WUJ3 1361 aa14.32□□□□□ -0.12
RBFOX1-224ENST00000641259 ABCA3Q99758 1704 aa14.31□□□□□ -0.12
RBFOX1-224ENST00000641259 PKP1Q13835 747 aa14.31□□□□□ -0.12
RBFOX1-224ENST00000641259 NOLC1Q14978 699 aaKnown RBP eCLIP14.31□□□□□ -0.12
RBFOX1-224ENST00000641259 ZBTB40Q9NUA8 1239 aa14.31□□□□□ -0.12
RBFOX1-224ENST00000641259 ABCC4O15439 1325 aa14.31□□□□□ -0.12
RBFOX1-224ENST00000641259 HTATSF1O43719 755 aaKnown RBP14.3□□□□□ -0.12
RBFOX1-224ENST00000641259 CD2BP2O95400 341 aaKnown RBP14.3□□□□□ -0.12
RBFOX1-224ENST00000641259 PPP1R9BQ96SB3 815 aa14.3□□□□□ -0.12
RBFOX1-224ENST00000641259 BCL2L12Q9HB09 334 aa14.3□□□□□ -0.12
RBFOX1-224ENST00000641259 CCDC66A2RUB6 948 aa14.3□□□□□ -0.12
RBFOX1-224ENST00000641259 SOS2Q07890 1332 aaPredicted RBP14.3□□□□□ -0.12
RBFOX1-224ENST00000641259 IPO8O15397 1037 aaKnown RBP14.3□□□□□ -0.12
RBFOX1-224ENST00000641259 MPRIPQ6WCQ1 1025 aa14.3□□□□□ -0.12
RBFOX1-224ENST00000641259 RBM25P49756 843 aaKnown RBP14.29□□□□□ -0.12
RBFOX1-224ENST00000641259 RAB3GAP1Q15042 981 aa14.29□□□□□ -0.12
RBFOX1-224ENST00000641259 MEGF6O75095 1541 aa14.29□□□□□ -0.12
RBFOX1-224ENST00000641259 TSPY26PQ9H489 355 aa14.29□□□□□ -0.12
RBFOX1-224ENST00000641259 DDX19BQ9UMR2 479 aa14.29□□□□□ -0.12
RBFOX1-224ENST00000641259 KDM3BQ7LBC6 1761 aa14.29□□□□□ -0.12
RBFOX1-224ENST00000641259 NECTIN2Q92692 538 aa14.29□□□□□ -0.12
RBFOX1-224ENST00000641259 C16orf45Q96MC5 204 aaPredicted RBP14.29□□□□□ -0.12
RBFOX1-224ENST00000641259 NHSL1Q5SYE7 1610 aa14.29□□□□□ -0.12
RBFOX1-224ENST00000641259 KCNQ3O43525 872 aa14.28□□□□□ -0.12
RBFOX1-224ENST00000641259 SKIDA1Q1XH10 827 aa14.28□□□□□ -0.12
RBFOX1-224ENST00000641259 ZNF530Q6P9A1 599 aaPredicted RBP14.28□□□□□ -0.12
RBFOX1-224ENST00000641259 G2E3Q7L622 706 aa14.28□□□□□ -0.12
RBFOX1-224ENST00000641259 ARHGAP45Q92619 1136 aa14.28□□□□□ -0.12
RBFOX1-224ENST00000641259 ZBTB7BO15156 539 aaPredicted RBP14.28□□□□□ -0.12
RBFOX1-224ENST00000641259 UTP14CQ5TAP6 766 aaKnown RBP14.28□□□□□ -0.12
RBFOX1-224ENST00000641259 DTNBO60941 627 aa14.28□□□□□ -0.12
RBFOX1-224ENST00000641259 TOMM22Q9NS69 142 aa14.27□□□□□ -0.12
RBFOX1-224ENST00000641259 DIAPH3Q9NSV4 1193 aa14.27□□□□□ -0.12
RBFOX1-224ENST00000641259 MYRIPQ8NFW9 859 aa14.27□□□□□ -0.13
RBFOX1-224ENST00000641259 GTF2F1P35269 517 aaKnown RBP eCLIP14.27□□□□□ -0.13
RBFOX1-224ENST00000641259 TAF7Q15545 349 aaPredicted RBP14.27□□□□□ -0.13
RBFOX1-224ENST00000641259 DHX37Q8IY37 1157 aaKnown RBP14.27□□□□□ -0.13
RBFOX1-224ENST00000641259 NLRP2Q9NX02 1062 aa14.27□□□□□ -0.13
RBFOX1-224ENST00000641259 SLC4A2P04920 1241 aa14.26□□□□□ -0.13
RBFOX1-224ENST00000641259 SIPA1L3O60292 1781 aaPredicted RBP14.26□□□□□ -0.13
RBFOX1-224ENST00000641259 NUCB2P80303 420 aa14.26□□□□□ -0.13
RBFOX1-224ENST00000641259 AKAP4Q5JQC9 854 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms