RNA–Protein interactions for RNA: ENST00000640634.1

SCARB2-222, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-222ENST00000640634 TTC5Q8N0Z6 440 aa14.32□□□□□ -0.12
SCARB2-222ENST00000640634 SPINK5Q9NQ38 1064 aaPredicted RBP14.32□□□□□ -0.12
SCARB2-222ENST00000640634 SLC27A3Q5K4L6 730 aa14.31□□□□□ -0.12
SCARB2-222ENST00000640634 PDGFDQ9GZP0 370 aaPredicted RBP14.31□□□□□ -0.12
SCARB2-222ENST00000640634 TSPYL4Q9UJ04 414 aa14.31□□□□□ -0.12
SCARB2-222ENST00000640634 CCDC27Q2M243 656 aa14.3□□□□□ -0.12
SCARB2-222ENST00000640634 PIAS4Q8N2W9 510 aaPredicted RBP14.3□□□□□ -0.12
SCARB2-222ENST00000640634 TSR2Q969E8 191 aaKnown RBP14.3□□□□□ -0.12
SCARB2-222ENST00000640634 ZNF831Q5JPB2 1677 aa14.3□□□□□ -0.12
SCARB2-222ENST00000640634 CICQ96RK0 1608 aaPredicted RBP14.3□□□□□ -0.12
SCARB2-222ENST00000640634 HEG1Q9ULI3 1381 aa14.3□□□□□ -0.12
SCARB2-222ENST00000640634 R3HDM1Q15032 1099 aaKnown RBP14.29□□□□□ -0.12
SCARB2-222ENST00000640634 MBIPQ9NS73 344 aa14.29□□□□□ -0.12
SCARB2-222ENST00000640634 ZNF521Q96K83 1311 aa14.29□□□□□ -0.12
SCARB2-222ENST00000640634 CHL1O00533 1208 aa14.29□□□□□ -0.12
SCARB2-222ENST00000640634 ZNF853P0CG23 659 aa14.29□□□□□ -0.12
SCARB2-222ENST00000640634 AKT1S1Q96B36 256 aa14.29□□□□□ -0.12
SCARB2-222ENST00000640634 MYH14Q7Z406 1995 aaKnown RBP14.29□□□□□ -0.12
SCARB2-222ENST00000640634 PIP4K2AP48426 406 aaPredicted RBP14.28□□□□□ -0.12
SCARB2-222ENST00000640634 EIF4A1P60842 406 aaKnown RBP14.28□□□□□ -0.12
SCARB2-222ENST00000640634 FMNL2Q96PY5 1086 aa14.28□□□□□ -0.12
SCARB2-222ENST00000640634 HNRNPUQ00839 825 aaKnown RBP eCLIP14.27□□□□□ -0.12
SCARB2-222ENST00000640634 SLC15A2Q16348 729 aa14.27□□□□□ -0.13
SCARB2-222ENST00000640634 IFT57Q9NWB7 429 aa14.27□□□□□ -0.13
SCARB2-222ENST00000640634 USP16Q9Y5T5 823 aa14.27□□□□□ -0.13
SCARB2-222ENST00000640634 UBR3Q6ZT12 1888 aa14.26□□□□□ -0.13
SCARB2-222ENST00000640634 PHF14O94880 888 aa14.26□□□□□ -0.13
SCARB2-222ENST00000640634 CYP19A1P11511 503 aaPredicted RBP14.26□□□□□ -0.13
SCARB2-222ENST00000640634 CRKLP46109 303 aaKnown RBP14.26□□□□□ -0.13
SCARB2-222ENST00000640634 CDCA7LQ96GN5 454 aa14.26□□□□□ -0.13
SCARB2-222ENST00000640634 LAMB4A4D0S4 1761 aa14.26□□□□□ -0.13
SCARB2-222ENST00000640634 GNPATO15228 680 aa14.25□□□□□ -0.13
SCARB2-222ENST00000640634 SLC4A2P04920 1241 aa14.25□□□□□ -0.13
SCARB2-222ENST00000640634 INTS5Q6P9B9 1019 aaKnown RBP14.25□□□□□ -0.13
SCARB2-222ENST00000640634 STK32BQ9NY57 414 aa14.25□□□□□ -0.13
SCARB2-222ENST00000640634 PNPLA7Q6ZV29 1317 aa14.25□□□□□ -0.13
SCARB2-222ENST00000640634 FANCIQ9NVI1 1328 aa14.25□□□□□ -0.13
SCARB2-222ENST00000640634 ELL2O00472 640 aaPredicted RBP14.24□□□□□ -0.13
SCARB2-222ENST00000640634 GIGYF1O75420 1035 aaPredicted RBP14.24□□□□□ -0.13
SCARB2-222ENST00000640634 GNAI1P63096 354 aa14.24□□□□□ -0.13
SCARB2-222ENST00000640634 NECTIN2Q92692 538 aa14.24□□□□□ -0.13
SCARB2-222ENST00000640634 ZBTB1Q9Y2K1 713 aa14.24□□□□□ -0.13
SCARB2-222ENST00000640634 CASZ1Q86V15 1759 aa14.24□□□□□ -0.13
SCARB2-222ENST00000640634 A1BGP04217 495 aa14.24□□□□□ -0.13
SCARB2-222ENST00000640634 C8orf58Q8NAV2 365 aa14.24□□□□□ -0.13
SCARB2-222ENST00000640634 AK7Q96M32 723 aa14.24□□□□□ -0.13
SCARB2-222ENST00000640634 TFCP2L1Q9NZI6 479 aa14.24□□□□□ -0.13
SCARB2-222ENST00000640634 SNRPA1P09661 255 aaKnown RBP14.23□□□□□ -0.13
SCARB2-222ENST00000640634 CALD1Q05682 793 aaKnown RBP14.23□□□□□ -0.13
SCARB2-222ENST00000640634 NBPF14Q5TI25 921 aa14.23□□□□□ -0.13
SCARB2-222ENST00000640634 WDR63Q8IWG1 891 aa14.23□□□□□ -0.13
SCARB2-222ENST00000640634 TSPYL6Q8N831 410 aa14.23□□□□□ -0.13
SCARB2-222ENST00000640634 CNTNAP4Q9C0A0 1308 aa14.22□□□□□ -0.13
SCARB2-222ENST00000640634 CANXP27824 592 aaKnown RBP14.22□□□□□ -0.13
SCARB2-222ENST00000640634 CCDC87Q9NVE4 849 aa14.22□□□□□ -0.13
SCARB2-222ENST00000640634 BABAM1Q9NWV8 329 aa14.22□□□□□ -0.13
SCARB2-222ENST00000640634 C4AP0C0L4 1744 aa14.22□□□□□ -0.13
SCARB2-222ENST00000640634 IL16Q14005 1332 aa14.22□□□□□ -0.13
SCARB2-222ENST00000640634 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.21□□□□□ -0.13
SCARB2-222ENST00000640634 NBPF26B4DH59 902 aa14.21□□□□□ -0.13
SCARB2-222ENST00000640634 NBPF10Q6P3W6 841 aaKnown RBP14.21□□□□□ -0.13
SCARB2-222ENST00000640634 COL23A1Q86Y22 540 aaPredicted RBP14.21□□□□□ -0.13
SCARB2-222ENST00000640634 NBPF15Q8N660 670 aa14.21□□□□□ -0.13
SCARB2-222ENST00000640634 QSER1Q2KHR3 1735 aa14.21□□□□□ -0.13
SCARB2-222ENST00000640634 ANXA1P04083 346 aa14.21□□□□□ -0.14
SCARB2-222ENST00000640634 EIF2S2P20042 333 aaKnown RBP14.21□□□□□ -0.14
SCARB2-222ENST00000640634 ZNF330Q9Y3S2 320 aaPredicted RBP14.21□□□□□ -0.14
SCARB2-222ENST00000640634 PROSER3Q2NL68 480 aa14.2□□□□□ -0.14
SCARB2-222ENST00000640634 DUSP27Q5VZP5 1158 aa14.2□□□□□ -0.14
SCARB2-222ENST00000640634 YTHDC1Q96MU7 727 aaKnown RBP14.2□□□□□ -0.14
SCARB2-222ENST00000640634 TCERG1O14776 1098 aaKnown RBP14.19□□□□□ -0.14
SCARB2-222ENST00000640634 STARD3NLO95772 234 aa14.19□□□□□ -0.14
SCARB2-222ENST00000640634 EXOSC9Q06265 439 aaKnown RBP14.19□□□□□ -0.14
SCARB2-222ENST00000640634 GOLGA2Q08379 1002 aa14.19□□□□□ -0.14
SCARB2-222ENST00000640634 NGEFQ8N5V2 710 aa14.19□□□□□ -0.14
SCARB2-222ENST00000640634 SOS1Q07889 1333 aaPredicted RBP14.19□□□□□ -0.14
SCARB2-222ENST00000640634 MSH5O43196 834 aa14.18□□□□□ -0.14
SCARB2-222ENST00000640634 RPS6KA4O75676 772 aa14.18□□□□□ -0.14
SCARB2-222ENST00000640634 ZBTB7AO95365 584 aa14.18□□□□□ -0.14
SCARB2-222ENST00000640634 RC3H1Q5TC82 1133 aaKnown RBP14.18□□□□□ -0.14
SCARB2-222ENST00000640634 SRP68Q9UHB9 627 aaKnown RBP14.18□□□□□ -0.14
SCARB2-222ENST00000640634 MYL6BP14649 208 aa14.18□□□□□ -0.14
SCARB2-222ENST00000640634 SLFN5Q08AF3 891 aa14.18□□□□□ -0.14
SCARB2-222ENST00000640634 MSL1Q68DK7 614 aa14.18□□□□□ -0.14
SCARB2-222ENST00000640634 ARHGEF1Q92888 912 aaKnown RBP14.18□□□□□ -0.14
SCARB2-222ENST00000640634 RTCBQ9Y3I0 505 aaKnown RBP14.18□□□□□ -0.14
SCARB2-222ENST00000640634 COL15A1P39059 1388 aa14.17□□□□□ -0.14
SCARB2-222ENST00000640634 PDIA6Q15084 440 aa14.17□□□□□ -0.14
SCARB2-222ENST00000640634 TEX13AQ9BXU3 409 aaPredicted RBP14.17□□□□□ -0.14
SCARB2-222ENST00000640634 SSFA2P28290 1259 aa14.16□□□□□ -0.14
SCARB2-222ENST00000640634 HDGFL1Q5TGJ6 251 aa14.16□□□□□ -0.14
SCARB2-222ENST00000640634 MYH16Q9H6N6 1097 aa14.16□□□□□ -0.14
SCARB2-222ENST00000640634 CHPF2Q9P2E5 772 aa14.16□□□□□ -0.14
SCARB2-222ENST00000640634 EIF5P55010 431 aaKnown RBP14.15□□□□□ -0.14
SCARB2-222ENST00000640634 TWISTNBQ3B726 338 aaPredicted RBP14.15□□□□□ -0.14
SCARB2-222ENST00000640634 LRP10Q7Z4F1 713 aa14.15□□□□□ -0.14
SCARB2-222ENST00000640634 TBC1D2BQ9UPU7 963 aa14.15□□□□□ -0.14
SCARB2-222ENST00000640634 ZBED9Q6R2W3 1325 aa14.15□□□□□ -0.14
SCARB2-222ENST00000640634 E9PSI1 815 aa14.15□□□□□ -0.14
SCARB2-222ENST00000640634 ECM2O94769 699 aaPredicted RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms