RNA–Protein interactions for RNA: ENST00000639838.1

SMIM23-203, Transcript of small integral membrane protein 23, humanhuman

TSL 5

Gene SMIM23, Length 1,319 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM23-203ENST00000639838 RFC4P35249 363 aa21.57■■□□□ 1.04
SMIM23-203ENST00000639838 LMOD3Q0VAK6 560 aa21.57■■□□□ 1.04
SMIM23-203ENST00000639838 MSL1Q68DK7 614 aa21.56■■□□□ 1.04
SMIM23-203ENST00000639838 NLGN1Q8N2Q7 840 aa21.56■■□□□ 1.04
SMIM23-203ENST00000639838 THUMPD2Q9BTF0 503 aaKnown RBP21.56■■□□□ 1.04
SMIM23-203ENST00000639838 BABAM1Q9NWV8 329 aa21.56■■□□□ 1.04
SMIM23-203ENST00000639838 SNRPA1P09661 255 aaKnown RBP21.55■■□□□ 1.04
SMIM23-203ENST00000639838 GYS1P13807 737 aa21.55■■□□□ 1.04
SMIM23-203ENST00000639838 MIS18AQ9NYP9 233 aa21.55■■□□□ 1.04
SMIM23-203ENST00000639838 TRIM35Q9UPQ4 493 aa21.55■■□□□ 1.04
SMIM23-203ENST00000639838 ZBTB1Q9Y2K1 713 aa21.55■■□□□ 1.04
SMIM23-203ENST00000639838 EIF5P55010 431 aaKnown RBP21.54■■□□□ 1.04
SMIM23-203ENST00000639838 USP16Q9Y5T5 823 aa21.54■■□□□ 1.04
SMIM23-203ENST00000639838 USP42Q9H9J4 1324 aaKnown RBP21.53■■□□□ 1.04
SMIM23-203ENST00000639838 RRP7AQ9Y3A4 280 aaKnown RBP21.53■■□□□ 1.04
SMIM23-203ENST00000639838 LAMB4A4D0S4 1761 aa21.52■■□□□ 1.04
SMIM23-203ENST00000639838 EIF4A1P60842 406 aaKnown RBP21.52■■□□□ 1.03
SMIM23-203ENST00000639838 KIF13BQ9NQT8 1826 aa21.51■■□□□ 1.03
SMIM23-203ENST00000639838 IL6STP40189 918 aaPredicted RBP21.51■■□□□ 1.03
SMIM23-203ENST00000639838 NEUROD2Q15784 382 aa21.51■■□□□ 1.03
SMIM23-203ENST00000639838 MRS2Q9HD23 443 aa21.51■■□□□ 1.03
SMIM23-203ENST00000639838 NARFQ9UHQ1 456 aa21.51■■□□□ 1.03
SMIM23-203ENST00000639838 CD2APQ9Y5K6 639 aa21.51■■□□□ 1.03
SMIM23-203ENST00000639838 COL15A1P39059 1388 aa21.5■■□□□ 1.03
SMIM23-203ENST00000639838 PRAMEF22A3QJZ6 481 aa21.5■■□□□ 1.03
SMIM23-203ENST00000639838 APAF1O14727 1248 aa21.5■■□□□ 1.03
SMIM23-203ENST00000639838 GIGYF1O75420 1035 aaPredicted RBP21.5■■□□□ 1.03
SMIM23-203ENST00000639838 A1BGP04217 495 aa21.5■■□□□ 1.03
SMIM23-203ENST00000639838 CANXP27824 592 aaKnown RBP21.5■■□□□ 1.03
SMIM23-203ENST00000639838 A0A087WZG4 1122 aa21.49■■□□□ 1.03
SMIM23-203ENST00000639838 SRP68Q9UHB9 627 aaKnown RBP21.49■■□□□ 1.03
SMIM23-203ENST00000639838 CHL1O00533 1208 aa21.48■■□□□ 1.03
SMIM23-203ENST00000639838 ZPR1O75312 459 aa21.48■■□□□ 1.03
SMIM23-203ENST00000639838 MMP10P09238 476 aa21.48■■□□□ 1.03
SMIM23-203ENST00000639838 TM4SF1P30408 202 aa21.47■■□□□ 1.03
SMIM23-203ENST00000639838 FKBP8Q14318 412 aa21.47■■□□□ 1.03
SMIM23-203ENST00000639838 TSPYL4Q9UJ04 414 aa21.47■■□□□ 1.03
SMIM23-203ENST00000639838 NCBP3Q53F19 620 aaKnown RBP21.46■■□□□ 1.03
SMIM23-203ENST00000639838 USPL1Q5W0Q7 1092 aa21.46■■□□□ 1.03
SMIM23-203ENST00000639838 BCL2L12Q9HB09 334 aa21.45■■□□□ 1.02
SMIM23-203ENST00000639838 AFDNP55196 1824 aaKnown RBP21.45■■□□□ 1.02
SMIM23-203ENST00000639838 NBPF26B4DH59 902 aa21.44■■□□□ 1.02
SMIM23-203ENST00000639838 NBPF10Q6P3W6 841 aaKnown RBP21.44■■□□□ 1.02
SMIM23-203ENST00000639838 NBPF15Q8N660 670 aa21.44■■□□□ 1.02
SMIM23-203ENST00000639838 SCN7AQ01118 1682 aa21.43■■□□□ 1.02
SMIM23-203ENST00000639838 CFAP44Q96MT7 982 aa21.43■■□□□ 1.02
SMIM23-203ENST00000639838 BCORQ6W2J9 1755 aa21.43■■□□□ 1.02
SMIM23-203ENST00000639838 NRXN2Q9P2S2 1712 aa21.42■■□□□ 1.02
SMIM23-203ENST00000639838 DCAF8L1A6NGE4 600 aa21.42■■□□□ 1.02
SMIM23-203ENST00000639838 ZNF853P0CG23 659 aa21.42■■□□□ 1.02
SMIM23-203ENST00000639838 CCDC27Q2M243 656 aa21.42■■□□□ 1.02
SMIM23-203ENST00000639838 NLGN2Q8NFZ4 835 aa21.42■■□□□ 1.02
SMIM23-203ENST00000639838 PARP3Q9Y6F1 533 aa21.42■■□□□ 1.02
SMIM23-203ENST00000639838 RGL2O15211 777 aa21.41■■□□□ 1.02
SMIM23-203ENST00000639838 KLHL34Q8N239 644 aa21.41■■□□□ 1.02
SMIM23-203ENST00000639838 TBC1D2BQ9UPU7 963 aa21.41■■□□□ 1.02
SMIM23-203ENST00000639838 KIAA1551Q9HCM1 1747 aa21.41■■□□□ 1.02
SMIM23-203ENST00000639838 CHD4Q14839 1912 aa21.4■■□□□ 1.02
SMIM23-203ENST00000639838 CALD1Q05682 793 aaKnown RBP21.4■■□□□ 1.02
SMIM23-203ENST00000639838 DDR1Q08345 913 aa21.4■■□□□ 1.02
SMIM23-203ENST00000639838 NPM2Q86SE8 214 aaKnown RBP21.4■■□□□ 1.02
SMIM23-203ENST00000639838 POLRMTO00411 1230 aaKnown RBP21.39■■□□□ 1.01
SMIM23-203ENST00000639838 NFIXQ14938 502 aa21.39■■□□□ 1.01
SMIM23-203ENST00000639838 GOLGB1Q14789 3259 aaKnown RBP21.39■■□□□ 1.01
SMIM23-203ENST00000639838 ERBB4Q15303 1308 aa21.39■■□□□ 1.01
SMIM23-203ENST00000639838 C10orf71Q711Q0 1435 aa21.39■■□□□ 1.01
SMIM23-203ENST00000639838 CAMTA2O94983 1202 aa21.38■■□□□ 1.01
SMIM23-203ENST00000639838 PIP4K2AP48426 406 aaPredicted RBP21.38■■□□□ 1.01
SMIM23-203ENST00000639838 IFT57Q9NWB7 429 aa21.38■■□□□ 1.01
SMIM23-203ENST00000639838 NUP98P52948 1817 aa21.38■■□□□ 1.01
SMIM23-203ENST00000639838 N4BP2Q86UW6 1770 aaPredicted RBP21.37■■□□□ 1.01
SMIM23-203ENST00000639838 TGFB2P61812 414 aa21.37■■□□□ 1.01
SMIM23-203ENST00000639838 CLEC4GQ6UXB4 293 aa21.37■■□□□ 1.01
SMIM23-203ENST00000639838 DZIP3Q86Y13 1208 aaKnown RBP21.37■■□□□ 1.01
SMIM23-203ENST00000639838 BRCA1P38398 1863 aaKnown RBP21.37■■□□□ 1.01
SMIM23-203ENST00000639838 GNAI1P63096 354 aa21.36■■□□□ 1.01
SMIM23-203ENST00000639838 ZNF330Q9Y3S2 320 aaPredicted RBP21.36■■□□□ 1.01
SMIM23-203ENST00000639838 UTRNP46939 3433 aa21.36■■□□□ 1.01
SMIM23-203ENST00000639838 HOXB7P09629 217 aa21.35■■□□□ 1.01
SMIM23-203ENST00000639838 WWC1Q8IX03 1113 aa21.35■■□□□ 1.01
SMIM23-203ENST00000639838 MBIPQ9NS73 344 aa21.35■■□□□ 1.01
SMIM23-203ENST00000639838 LAS1LQ9Y4W2 734 aaKnown RBP21.35■■□□□ 1.01
SMIM23-203ENST00000639838 PDIA6Q15084 440 aa21.34■■□□□ 1.01
SMIM23-203ENST00000639838 TBC1D9BQ66K14 1250 aa21.33■■□□□ 1.01
SMIM23-203ENST00000639838 LRP10Q7Z4F1 713 aa21.33■■□□□ 1.01
SMIM23-203ENST00000639838 PXDNLA1KZ92 1463 aa21.33■■□□□ 1
SMIM23-203ENST00000639838 SERPINB2P05120 415 aa21.32■■□□□ 1
SMIM23-203ENST00000639838 NGEFQ8N5V2 710 aa21.32■■□□□ 1
SMIM23-203ENST00000639838 ERVV-1B6SEH8 477 aa21.31■■□□□ 1
SMIM23-203ENST00000639838 GPR162Q16538 588 aa21.31■■□□□ 1
SMIM23-203ENST00000639838 KRT24Q2M2I5 525 aa21.31■■□□□ 1
SMIM23-203ENST00000639838 FAM9BQ8IZU0 186 aa21.31■■□□□ 1
SMIM23-203ENST00000639838 IL16Q14005 1332 aa21.31■■□□□ 1
SMIM23-203ENST00000639838 EIF2S2P20042 333 aaKnown RBP21.3■■□□□ 1
SMIM23-203ENST00000639838 ZNF652Q9Y2D9 606 aa21.3■■□□□ 1
SMIM23-203ENST00000639838 CARMIL3Q8ND23 1372 aa21.3■■□□□ 1
SMIM23-203ENST00000639838 CCER2I3L3R5 266 aa21.29■■□□□ 1
SMIM23-203ENST00000639838 YBX3P16989 372 aaKnown RBP eCLIP21.29■■□□□ 1
SMIM23-203ENST00000639838 KCNA3P22001 575 aa21.29■■□□□ 1
SMIM23-203ENST00000639838 SETDB2Q96T68 719 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms