RNA–Protein interactions for RNA: ENST00000639629.1

CCDC7-215, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC7, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-215ENST00000639629 RAPGEFL1Q9UHV5 662 aa1.21□□□□□ -2.22
CCDC7-215ENST00000639629 BNIP3LO60238 219 aa1.21□□□□□ -2.22
CCDC7-215ENST00000639629 GDF11O95390 407 aa1.21□□□□□ -2.22
CCDC7-215ENST00000639629 MSX1P28360 303 aa1.21□□□□□ -2.22
CCDC7-215ENST00000639629 SOX18P35713 384 aa1.21□□□□□ -2.22
CCDC7-215ENST00000639629 LARGE2Q8N3Y3 721 aa1.21□□□□□ -2.22
CCDC7-215ENST00000639629 NRSN2Q9GZP1 204 aa1.21□□□□□ -2.22
CCDC7-215ENST00000639629 SOX17Q9H6I2 414 aaPredicted RBP1.21□□□□□ -2.22
CCDC7-215ENST00000639629 SLC24A3Q9HC58 644 aa1.21□□□□□ -2.22
CCDC7-215ENST00000639629 GDF2Q9UK05 429 aaPredicted RBP1.21□□□□□ -2.22
CCDC7-215ENST00000639629 ADAMTS2O95450 1211 aa1.2□□□□□ -2.22
CCDC7-215ENST00000639629 TAS1R3Q7RTX0 852 aa1.2□□□□□ -2.22
CCDC7-215ENST00000639629 FCHSD1Q86WN1 690 aa1.2□□□□□ -2.22
CCDC7-215ENST00000639629 GOLGA6L1Q8N7Z2 621 aa1.2□□□□□ -2.22
CCDC7-215ENST00000639629 C2orf49Q9BVC5 232 aaPredicted RBP1.2□□□□□ -2.22
CCDC7-215ENST00000639629 ETNK1Q9HBU6 452 aa1.2□□□□□ -2.22
CCDC7-215ENST00000639629 RNF112Q9ULX5 631 aa1.2□□□□□ -2.22
CCDC7-215ENST00000639629 BCS1LQ9Y276 419 aa1.2□□□□□ -2.22
CCDC7-215ENST00000639629 PRR19A6NJB7 356 aa1.2□□□□□ -2.22
CCDC7-215ENST00000639629 WASHC4Q2M389 1173 aa1.2□□□□□ -2.22
CCDC7-215ENST00000639629 FBXO11Q86XK2 927 aa1.2□□□□□ -2.22
CCDC7-215ENST00000639629 RHBDD1Q8TEB9 315 aa1.2□□□□□ -2.22
CCDC7-215ENST00000639629 ARHGAP9Q9BRR9 750 aa1.2□□□□□ -2.22
CCDC7-215ENST00000639629 CNTNAP5Q8WYK1 1306 aa1.2□□□□□ -2.22
CCDC7-215ENST00000639629 GNB5O14775 395 aa1.2□□□□□ -2.22
CCDC7-215ENST00000639629 NBPF20Q3BBV1 942 aa1.2□□□□□ -2.22
CCDC7-215ENST00000639629 BHLHE22Q8NFJ8 381 aaPredicted RBP1.2□□□□□ -2.22
CCDC7-215ENST00000639629 SPINK2P20155 84 aa1.19□□□□□ -2.22
CCDC7-215ENST00000639629 FOXC1Q12948 553 aa1.19□□□□□ -2.22
CCDC7-215ENST00000639629 LCE5AQ5TCM9 118 aa1.19□□□□□ -2.22
CCDC7-215ENST00000639629 TRIM11Q96F44 468 aa1.19□□□□□ -2.22
CCDC7-215ENST00000639629 WASF2Q9Y6W5 498 aa1.19□□□□□ -2.22
CCDC7-215ENST00000639629 ITGB5P18084 799 aa1.19□□□□□ -2.22
CCDC7-215ENST00000639629 SCTRP47872 440 aa1.19□□□□□ -2.22
CCDC7-215ENST00000639629 MCM6Q14566 821 aa1.19□□□□□ -2.22
CCDC7-215ENST00000639629 CPSF6Q16630 551 aaKnown RBP eCLIP1.19□□□□□ -2.22
CCDC7-215ENST00000639629 ARTNQ5T4W7 220 aa1.19□□□□□ -2.22
CCDC7-215ENST00000639629 BEND7Q8N7W2 519 aaPredicted RBP1.19□□□□□ -2.22
CCDC7-215ENST00000639629 UCN2Q96RP3 112 aa1.19□□□□□ -2.22
CCDC7-215ENST00000639629 ZNF281Q9Y2X9 895 aa1.19□□□□□ -2.22
CCDC7-215ENST00000639629 PCDHGC4Q9Y5F7 938 aa1.19□□□□□ -2.22
CCDC7-215ENST00000639629 IGFBP4P22692 258 aa1.19□□□□□ -2.22
CCDC7-215ENST00000639629 RELBQ01201 579 aa1.19□□□□□ -2.22
CCDC7-215ENST00000639629 OCLNQ16625 522 aa1.19□□□□□ -2.22
CCDC7-215ENST00000639629 TSGA10IPQ3SY00 556 aa1.19□□□□□ -2.22
CCDC7-215ENST00000639629 C4orf17Q53FE4 359 aa1.19□□□□□ -2.22
CCDC7-215ENST00000639629 SEZ6L2Q6UXD5 910 aa1.19□□□□□ -2.22
CCDC7-215ENST00000639629 LURAP1LQ8IV03 231 aa1.19□□□□□ -2.22
CCDC7-215ENST00000639629 WNT8BQ93098 351 aa1.19□□□□□ -2.22
CCDC7-215ENST00000639629 CBLBQ13191 982 aa1.18□□□□□ -2.22
CCDC7-215ENST00000639629 VASH1Q7L8A9 365 aaPredicted RBP1.18□□□□□ -2.22
CCDC7-215ENST00000639629 CD163Q86VB7 1156 aa1.18□□□□□ -2.22
CCDC7-215ENST00000639629 DTX1Q86Y01 620 aa1.18□□□□□ -2.22
CCDC7-215ENST00000639629 HELBQ8NG08 1087 aaPredicted RBP1.18□□□□□ -2.22
CCDC7-215ENST00000639629 PHF20L1A8MW92 1017 aa1.18□□□□□ -2.22
CCDC7-215ENST00000639629 C6orf229H3BNL8 230 aa1.18□□□□□ -2.22
CCDC7-215ENST00000639629 INPP5BP32019 993 aa1.18□□□□□ -2.22
CCDC7-215ENST00000639629 ESCO1Q5FWF5 840 aa1.18□□□□□ -2.22
CCDC7-215ENST00000639629 MICALL1Q8N3F8 863 aa1.18□□□□□ -2.22
CCDC7-215ENST00000639629 PNMA1Q8ND90 353 aa1.18□□□□□ -2.22
CCDC7-215ENST00000639629 SNRPNP63162 240 aaKnown RBP1.18□□□□□ -2.22
CCDC7-215ENST00000639629 EZH1Q92800 747 aaPredicted RBP1.18□□□□□ -2.22
CCDC7-215ENST00000639629 TMPRSS4Q9NRS4 437 aa1.18□□□□□ -2.22
CCDC7-215ENST00000639629 COL19A1Q14993 1142 aa1.18□□□□□ -2.22
CCDC7-215ENST00000639629 AGERQ15109 404 aa1.18□□□□□ -2.22
CCDC7-215ENST00000639629 FIGNL1Q6PIW4 674 aa1.18□□□□□ -2.22
CCDC7-215ENST00000639629 KCTD17Q8N5Z5 321 aa1.18□□□□□ -2.22
CCDC7-215ENST00000639629 SIRT1Q96EB6 747 aa1.18□□□□□ -2.22
CCDC7-215ENST00000639629 ENAMQ9NRM1 1142 aa1.18□□□□□ -2.22
CCDC7-215ENST00000639629 COG6Q9Y2V7 657 aa1.18□□□□□ -2.22
CCDC7-215ENST00000639629 LMTK3Q96Q04 1460 aa1.17□□□□□ -2.22
CCDC7-215ENST00000639629 ZBTB42B2RXF5 422 aa1.17□□□□□ -2.22
CCDC7-215ENST00000639629 NFKBIEO00221 500 aa1.17□□□□□ -2.22
CCDC7-215ENST00000639629 PIK3R2O00459 728 aa1.17□□□□□ -2.22
CCDC7-215ENST00000639629 MSTNO14793 375 aa1.17□□□□□ -2.22
CCDC7-215ENST00000639629 PTPN12Q05209 780 aaKnown RBP1.17□□□□□ -2.22
CCDC7-215ENST00000639629 FAM214BQ7L5A3 538 aa1.17□□□□□ -2.22
CCDC7-215ENST00000639629 FAM46AQ96IP4 442 aaKnown RBP1.17□□□□□ -2.22
CCDC7-215ENST00000639629 FAM196BA6NMK8 535 aa1.17□□□□□ -2.22
CCDC7-215ENST00000639629 TNFRSF10BO14763 440 aa1.17□□□□□ -2.22
CCDC7-215ENST00000639629 PAX4O43316 350 aa1.17□□□□□ -2.22
CCDC7-215ENST00000639629 SPATA31C1P0DKV0 1188 aa1.17□□□□□ -2.22
CCDC7-215ENST00000639629 SRFP11831 508 aa1.17□□□□□ -2.22
CCDC7-215ENST00000639629 FSHRP23945 695 aa1.17□□□□□ -2.22
CCDC7-215ENST00000639629 PTK7Q13308 1070 aa1.17□□□□□ -2.22
CCDC7-215ENST00000639629 C22orf34Q6ZV56 151 aa1.17□□□□□ -2.22
CCDC7-215ENST00000639629 MAP4K3Q8IVH8 894 aa1.17□□□□□ -2.22
CCDC7-215ENST00000639629 VWA5B2Q8N398 1253 aa1.17□□□□□ -2.22
CCDC7-215ENST00000639629 Q8N3U1 123 aa1.17□□□□□ -2.22
CCDC7-215ENST00000639629 CDCA7Q9BWT1 371 aaPredicted RBP1.17□□□□□ -2.22
CCDC7-215ENST00000639629 OXCT2Q9BYC2 517 aaPredicted RBP1.17□□□□□ -2.22
CCDC7-215ENST00000639629 STRN4Q9NRL3 753 aa1.17□□□□□ -2.22
CCDC7-215ENST00000639629 SLAIN2Q9P270 581 aa1.17□□□□□ -2.22
CCDC7-215ENST00000639629 SOBPA7XYQ1 873 aa1.17□□□□□ -2.22
CCDC7-215ENST00000639629 FGFR3P22607 806 aa1.17□□□□□ -2.22
CCDC7-215ENST00000639629 ZNF358Q9NW07 568 aa1.17□□□□□ -2.22
CCDC7-215ENST00000639629 A6NJY4 79 aa1.16□□□□□ -2.22
CCDC7-215ENST00000639629 CAP1Q01518 475 aa1.16□□□□□ -2.22
CCDC7-215ENST00000639629 USP4Q13107 963 aa1.16□□□□□ -2.22
CCDC7-215ENST00000639629 UVSSAQ2YD98 709 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms