RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 C6orf203Q9P0P8 240 aaPredicted RBP5.04□□□□□ -1.6
SCN3A-209ENST00000639244 NF2P35240 595 aa5.04□□□□□ -1.6
SCN3A-209ENST00000639244 NOP2P46087 812 aaKnown RBP5.04□□□□□ -1.6
SCN3A-209ENST00000639244 BIRC3Q13489 604 aa5.04□□□□□ -1.6
SCN3A-209ENST00000639244 MRRFQ96E11 262 aaKnown RBP5.04□□□□□ -1.6
SCN3A-209ENST00000639244 ZNF232Q9UNY5 417 aa5.04□□□□□ -1.6
SCN3A-209ENST00000639244 ZBTB17Q13105 803 aa5.04□□□□□ -1.6
SCN3A-209ENST00000639244 MSL1Q68DK7 614 aa5.04□□□□□ -1.6
SCN3A-209ENST00000639244 USP33Q8TEY7 942 aa5.04□□□□□ -1.6
SCN3A-209ENST00000639244 DNAI2Q9GZS0 605 aa5.04□□□□□ -1.6
SCN3A-209ENST00000639244 TRIM64CA6NLI5 447 aa5.04□□□□□ -1.6
SCN3A-209ENST00000639244 RAD51AP2Q09MP3 1159 aa5.04□□□□□ -1.6
SCN3A-209ENST00000639244 TMX1Q9H3N1 280 aa5.04□□□□□ -1.6
SCN3A-209ENST00000639244 GRPEL1Q9HAV7 217 aa5.04□□□□□ -1.6
SCN3A-209ENST00000639244 IFT122Q9HBG6 1241 aa5.04□□□□□ -1.6
SCN3A-209ENST00000639244 DIS3Q9Y2L1 958 aaKnown RBP5.04□□□□□ -1.6
SCN3A-209ENST00000639244 SCINQ9Y6U3 715 aa5.04□□□□□ -1.6
SCN3A-209ENST00000639244 A0A1B0GUA9 196 aa5.04□□□□□ -1.6
SCN3A-209ENST00000639244 RBM47A0AV96 593 aaKnown RBP5.04□□□□□ -1.6
SCN3A-209ENST00000639244 ECEL1O95672 775 aa5.04□□□□□ -1.6
SCN3A-209ENST00000639244 CCDC186Q7Z3E2 898 aa5.04□□□□□ -1.6
SCN3A-209ENST00000639244 TSNAXIP1Q2TAA8 658 aa5.04□□□□□ -1.6
SCN3A-209ENST00000639244 HHATQ5VTY9 493 aa5.04□□□□□ -1.6
SCN3A-209ENST00000639244 B4GALNT3Q6L9W6 998 aa5.04□□□□□ -1.6
SCN3A-209ENST00000639244 FAM107BQ9H098 131 aa5.04□□□□□ -1.6
SCN3A-209ENST00000639244 MYOCDQ8IZQ8 938 aa5.03□□□□□ -1.6
SCN3A-209ENST00000639244 SBNO2Q9Y2G9 1366 aa5.03□□□□□ -1.6
SCN3A-209ENST00000639244 GOLGA2Q08379 1002 aa5.03□□□□□ -1.6
SCN3A-209ENST00000639244 MAMSTRQ6ZN01 415 aa5.03□□□□□ -1.6
SCN3A-209ENST00000639244 TRIM42Q8IWZ5 723 aa5.03□□□□□ -1.6
SCN3A-209ENST00000639244 CCDC26Q8TAB7 109 aa5.03□□□□□ -1.6
SCN3A-209ENST00000639244 NEK1Q96PY6 1258 aa5.03□□□□□ -1.6
SCN3A-209ENST00000639244 SKILP12757 684 aa5.03□□□□□ -1.6
SCN3A-209ENST00000639244 STIP1P31948 543 aaKnown RBP5.03□□□□□ -1.6
SCN3A-209ENST00000639244 CCDC102AQ96A19 550 aa5.03□□□□□ -1.6
SCN3A-209ENST00000639244 IFT57Q9NWB7 429 aa5.03□□□□□ -1.6
SCN3A-209ENST00000639244 MAN1A1P33908 653 aa5.03□□□□□ -1.6
SCN3A-209ENST00000639244 ICA1Q05084 483 aa5.03□□□□□ -1.6
SCN3A-209ENST00000639244 FAM114A1Q8IWE2 563 aa5.03□□□□□ -1.6
SCN3A-209ENST00000639244 USP6NLQ92738 828 aa5.03□□□□□ -1.6
SCN3A-209ENST00000639244 MECOMQ03112 1051 aa5.03□□□□□ -1.6
SCN3A-209ENST00000639244 TRAK1Q9UPV9 953 aa5.03□□□□□ -1.6
SCN3A-209ENST00000639244 SCRIBQ14160 1630 aa5.03□□□□□ -1.6
SCN3A-209ENST00000639244 WDR43Q15061 677 aaKnown RBP eCLIP5.03□□□□□ -1.6
SCN3A-209ENST00000639244 MYRIPQ8NFW9 859 aa5.03□□□□□ -1.6
SCN3A-209ENST00000639244 TAF4BQ92750 862 aa5.03□□□□□ -1.6
SCN3A-209ENST00000639244 HIP1RO75146 1068 aa5.03□□□□□ -1.6
SCN3A-209ENST00000639244 ERCC5P28715 1186 aaPredicted RBP5.03□□□□□ -1.6
SCN3A-209ENST00000639244 CFAP58Q5T655 872 aa5.03□□□□□ -1.6
SCN3A-209ENST00000639244 DPH6Q7L8W6 267 aa5.03□□□□□ -1.6
SCN3A-209ENST00000639244 DDX11Q96FC9 970 aa5.03□□□□□ -1.6
SCN3A-209ENST00000639244 RETREG1Q9H6L5 497 aa5.03□□□□□ -1.6
SCN3A-209ENST00000639244 TMOD4Q9NZQ9 345 aa5.03□□□□□ -1.6
SCN3A-209ENST00000639244 POGKQ9P215 609 aa5.03□□□□□ -1.6
SCN3A-209ENST00000639244 VMP1Q96GC9 406 aa5.02□□□□□ -1.61
SCN3A-209ENST00000639244 MLECQ14165 292 aa5.02□□□□□ -1.61
SCN3A-209ENST00000639244 MAP9Q49MG5 647 aa5.02□□□□□ -1.61
SCN3A-209ENST00000639244 NAA16Q6N069 864 aaPredicted RBP5.02□□□□□ -1.61
SCN3A-209ENST00000639244 GBP6Q6ZN66 633 aa5.02□□□□□ -1.61
SCN3A-209ENST00000639244 MMS22LQ6ZRQ5 1243 aa5.02□□□□□ -1.61
SCN3A-209ENST00000639244 FNBP4Q8N3X1 1017 aaPredicted RBP5.02□□□□□ -1.61
SCN3A-209ENST00000639244 SENP7Q9BQF6 1050 aa5.02□□□□□ -1.61
SCN3A-209ENST00000639244 MYO1BO43795 1136 aa5.02□□□□□ -1.61
SCN3A-209ENST00000639244 TBCAO75347 108 aaKnown RBP5.02□□□□□ -1.61
SCN3A-209ENST00000639244 CD53P19397 219 aa5.02□□□□□ -1.61
SCN3A-209ENST00000639244 GSCP56915 257 aaPredicted RBP5.02□□□□□ -1.61
SCN3A-209ENST00000639244 ZC3H6P61129 1189 aaKnown RBP5.02□□□□□ -1.61
SCN3A-209ENST00000639244 COL19A1Q14993 1142 aa5.02□□□□□ -1.61
SCN3A-209ENST00000639244 TBC1D2BQ9UPU7 963 aa5.02□□□□□ -1.61
SCN3A-209ENST00000639244 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.02□□□□□ -1.61
SCN3A-209ENST00000639244 IKQ13123 557 aaPredicted RBP5.02□□□□□ -1.61
SCN3A-209ENST00000639244 CCDC158Q5M9N0 1113 aa5.02□□□□□ -1.61
SCN3A-209ENST00000639244 LEKR1Q6ZMV7 388 aa5.02□□□□□ -1.61
SCN3A-209ENST00000639244 SEPT10Q9P0V9 454 aa5.02□□□□□ -1.61
SCN3A-209ENST00000639244 MRFAP1L1Q96HT8 127 aa5.02□□□□□ -1.61
SCN3A-209ENST00000639244 PCDHGA4Q9Y5G9 962 aa5.02□□□□□ -1.61
SCN3A-209ENST00000639244 NFE2L2Q16236 605 aa5.02□□□□□ -1.61
SCN3A-209ENST00000639244 SDCCAG8Q86SQ7 713 aaPredicted RBP5.02□□□□□ -1.61
SCN3A-209ENST00000639244 TCHPQ9BT92 498 aa5.02□□□□□ -1.61
SCN3A-209ENST00000639244 TSPY26PQ9H489 355 aa5.02□□□□□ -1.61
SCN3A-209ENST00000639244 IVLP07476 585 aa5.02□□□□□ -1.61
SCN3A-209ENST00000639244 C4orf46Q504U0 113 aa5.02□□□□□ -1.61
SCN3A-209ENST00000639244 CCDC178Q5BJE1 867 aa5.02□□□□□ -1.61
SCN3A-209ENST00000639244 SKAP1Q86WV1 359 aa5.02□□□□□ -1.61
SCN3A-209ENST00000639244 NAP1L3Q99457 506 aaPredicted RBP5.02□□□□□ -1.61
SCN3A-209ENST00000639244 STK31Q9BXU1 1019 aa5.02□□□□□ -1.61
SCN3A-209ENST00000639244 DHX36Q9H2U1 1008 aaKnown RBP5.02□□□□□ -1.61
SCN3A-209ENST00000639244 RABEP2Q9H5N1 569 aa5.02□□□□□ -1.61
SCN3A-209ENST00000639244 MYO6Q9UM54 1294 aa5.02□□□□□ -1.61
SCN3A-209ENST00000639244 NAT2P11245 290 aa5.01□□□□□ -1.61
SCN3A-209ENST00000639244 TERF2Q15554 542 aa5.01□□□□□ -1.61
SCN3A-209ENST00000639244 KIF4BQ2VIQ3 1234 aa5.01□□□□□ -1.61
SCN3A-209ENST00000639244 NBPF8Q3BBV2 869 aa5.01□□□□□ -1.61
SCN3A-209ENST00000639244 CEP63Q96MT8 703 aa5.01□□□□□ -1.61
SCN3A-209ENST00000639244 LRRCC1Q9C099 1032 aa5.01□□□□□ -1.61
SCN3A-209ENST00000639244 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.01□□□□□ -1.61
SCN3A-209ENST00000639244 MTRF1O75570 445 aaKnown RBP5.01□□□□□ -1.61
SCN3A-209ENST00000639244 PTPROQ16827 1216 aa5.01□□□□□ -1.61
SCN3A-209ENST00000639244 AGAP3Q96P47 875 aa5.01□□□□□ -1.61
SCN3A-209ENST00000639244 XPCQ01831 940 aaPredicted RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms