RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, human

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMBR1-222	ENST00000638959	LRRN4	Q8WUT4	740 aa		3.97	□□□□□ -1.77
LMBR1-222	ENST00000638959	DNAAF2	Q9NVR5	837 aa	Known RBP	3.97	□□□□□ -1.77
LMBR1-222	ENST00000638959	USP21	Q9UK80	565 aa		3.97	□□□□□ -1.77
LMBR1-222	ENST00000638959	TULP1	O00294	542 aa	Predicted RBP	3.96	□□□□□ -1.78
LMBR1-222	ENST00000638959	CD97	P48960	835 aa		3.96	□□□□□ -1.78
LMBR1-222	ENST00000638959	CENPC	Q03188	943 aa		3.96	□□□□□ -1.78
LMBR1-222	ENST00000638959	COL9A3	Q14050	684 aa	Predicted RBP	3.96	□□□□□ -1.78
LMBR1-222	ENST00000638959	SHISA2	Q6UWI4	295 aa		3.96	□□□□□ -1.78
LMBR1-222	ENST00000638959	C8orf86	Q6ZUL3	223 aa		3.96	□□□□□ -1.78
LMBR1-222	ENST00000638959	CNKSR1	Q969H4	720 aa		3.96	□□□□□ -1.78
LMBR1-222	ENST00000638959	SSBP4	Q9BWG4	385 aa	Predicted RBP	3.96	□□□□□ -1.78
LMBR1-222	ENST00000638959	ESF1	Q9H501	851 aa	Known RBP	3.96	□□□□□ -1.78
LMBR1-222	ENST00000638959	GIGYF1	O75420	1035 aa	Predicted RBP	3.95	□□□□□ -1.78
LMBR1-222	ENST00000638959	NID1	P14543	1247 aa		3.95	□□□□□ -1.78
LMBR1-222	ENST00000638959	SCTR	P47872	440 aa		3.95	□□□□□ -1.78
LMBR1-222	ENST00000638959	AMHR2	Q16671	573 aa		3.95	□□□□□ -1.78
LMBR1-222	ENST00000638959	TUSC1	Q2TAM9	212 aa		3.95	□□□□□ -1.78
LMBR1-222	ENST00000638959	TRAPPC3L	Q5T215	181 aa		3.95	□□□□□ -1.78
LMBR1-222	ENST00000638959	LENG1	Q96BZ8	264 aa	Predicted RBP	3.95	□□□□□ -1.78
LMBR1-222	ENST00000638959	ESYT1	Q9BSJ8	1104 aa		3.95	□□□□□ -1.78
LMBR1-222	ENST00000638959	IL2RA	P01589	272 aa		3.94	□□□□□ -1.78
LMBR1-222	ENST00000638959	ALB	P02768	609 aa		3.94	□□□□□ -1.78
LMBR1-222	ENST00000638959	TNP2	Q05952	138 aa		3.94	□□□□□ -1.78
LMBR1-222	ENST00000638959	MYSM1	Q5VVJ2	828 aa		3.94	□□□□□ -1.78
LMBR1-222	ENST00000638959	TBC1D9	Q6ZT07	1266 aa		3.94	□□□□□ -1.78
LMBR1-222	ENST00000638959	NLRP8	Q86W28	1048 aa		3.94	□□□□□ -1.78
LMBR1-222	ENST00000638959	PNMA1	Q8ND90	353 aa		3.94	□□□□□ -1.78
LMBR1-222	ENST00000638959	PRDM6	Q9NQX0	595 aa		3.94	□□□□□ -1.78
LMBR1-222	ENST00000638959	HCN2	Q9UL51	889 aa		3.94	□□□□□ -1.78
LMBR1-222	ENST00000638959		A0A0A0MRY4	1105 aa		3.93	□□□□□ -1.78
LMBR1-222	ENST00000638959	C8A	P07357	584 aa		3.93	□□□□□ -1.78
LMBR1-222	ENST00000638959	OGFOD2	Q6N063	350 aa		3.93	□□□□□ -1.78
LMBR1-222	ENST00000638959	SYT9	Q86SS6	491 aa		3.93	□□□□□ -1.78
LMBR1-222	ENST00000638959	MICALL1	Q8N3F8	863 aa		3.93	□□□□□ -1.78
LMBR1-222	ENST00000638959	KRTAP9-8	Q9BYQ0	159 aa		3.93	□□□□□ -1.78
LMBR1-222	ENST00000638959	OSBPL3	Q9H4L5	887 aa		3.93	□□□□□ -1.78
LMBR1-222	ENST00000638959	GNRH1	P01148	92 aa		3.92	□□□□□ -1.78
LMBR1-222	ENST00000638959	PLA2G4A	P47712	749 aa		3.92	□□□□□ -1.78
LMBR1-222	ENST00000638959	RAC1	P63000	192 aa		3.92	□□□□□ -1.78
LMBR1-222	ENST00000638959	RHBDD1	Q8TEB9	315 aa		3.92	□□□□□ -1.78
LMBR1-222	ENST00000638959	TRAK2	O60296	914 aa		3.91	□□□□□ -1.78
LMBR1-222	ENST00000638959	FST	P19883	344 aa		3.91	□□□□□ -1.78
LMBR1-222	ENST00000638959	LCE5A	Q5TCM9	118 aa		3.91	□□□□□ -1.78
LMBR1-222	ENST00000638959	PRR23C	Q6ZRP0	262 aa		3.91	□□□□□ -1.78
LMBR1-222	ENST00000638959	CCDC125	Q86Z20	511 aa		3.91	□□□□□ -1.78
LMBR1-222	ENST00000638959	FHDC1	Q9C0D6	1143 aa	Predicted RBP	3.91	□□□□□ -1.78
LMBR1-222	ENST00000638959	MARK1	Q9P0L2	795 aa		3.91	□□□□□ -1.78
LMBR1-222	ENST00000638959	STARD13	Q9Y3M8	1113 aa		3.91	□□□□□ -1.78
LMBR1-222	ENST00000638959	PCDHB9	Q9Y5E1	797 aa		3.91	□□□□□ -1.78
LMBR1-222	ENST00000638959	PCDHB11	Q9Y5F2	797 aa		3.91	□□□□□ -1.78
LMBR1-222	ENST00000638959	ADARB2-AS1	A8MUL3	147 aa		3.9	□□□□□ -1.79
LMBR1-222	ENST00000638959	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	3.9	□□□□□ -1.79
LMBR1-222	ENST00000638959	ATP4A	P20648	1035 aa		3.9	□□□□□ -1.79
LMBR1-222	ENST00000638959	CLK2	P49760	499 aa	Known RBP	3.9	□□□□□ -1.79
LMBR1-222	ENST00000638959	ARSJ	Q5FYB0	599 aa	Predicted RBP	3.9	□□□□□ -1.79
LMBR1-222	ENST00000638959	RNF20	Q5VTR2	975 aa		3.9	□□□□□ -1.79
LMBR1-222	ENST00000638959	PARP9	Q8IXQ6	854 aa		3.9	□□□□□ -1.79
LMBR1-222	ENST00000638959	MDFI	Q99750	246 aa		3.9	□□□□□ -1.79
LMBR1-222	ENST00000638959		A0A1W2PNR3	127 aa		3.89	□□□□□ -1.79
LMBR1-222	ENST00000638959	LILRB5	O75023	590 aa		3.89	□□□□□ -1.79
LMBR1-222	ENST00000638959	SIN3B	O75182	1162 aa		3.89	□□□□□ -1.79
LMBR1-222	ENST00000638959	MED26	O95402	600 aa		3.89	□□□□□ -1.79
LMBR1-222	ENST00000638959	FAM157B	P0CG42	384 aa		3.89	□□□□□ -1.79
LMBR1-222	ENST00000638959	IREB2	P48200	963 aa	Known RBP	3.89	□□□□□ -1.79
LMBR1-222	ENST00000638959	FBLN7	Q53RD9	439 aa		3.89	□□□□□ -1.79
LMBR1-222	ENST00000638959	C1orf216	Q8TAB5	229 aa		3.89	□□□□□ -1.79
LMBR1-222	ENST00000638959	AIDA	Q96BJ3	306 aa		3.89	□□□□□ -1.79
LMBR1-222	ENST00000638959	STRN4	Q9NRL3	753 aa		3.89	□□□□□ -1.79
LMBR1-222	ENST00000638959	HRH3	Q9Y5N1	445 aa		3.89	□□□□□ -1.79
LMBR1-222	ENST00000638959	GJA3	Q9Y6H8	435 aa		3.89	□□□□□ -1.79
LMBR1-222	ENST00000638959	ADH7	P40394	386 aa		3.88	□□□□□ -1.79
LMBR1-222	ENST00000638959	SLC51A	Q86UW1	340 aa		3.88	□□□□□ -1.79
LMBR1-222	ENST00000638959	EPS8L1	Q8TE68	723 aa		3.88	□□□□□ -1.79
LMBR1-222	ENST00000638959	WFDC12	Q8WWY7	111 aa		3.88	□□□□□ -1.79
LMBR1-222	ENST00000638959	ATP1B4	Q9UN42	357 aa	Predicted RBP	3.88	□□□□□ -1.79
LMBR1-222	ENST00000638959	PTCD1	O75127	700 aa	Known RBP	3.87	□□□□□ -1.79
LMBR1-222	ENST00000638959	TGFB1	P01137	390 aa		3.87	□□□□□ -1.79
LMBR1-222	ENST00000638959	TLR1	Q15399	786 aa		3.87	□□□□□ -1.79
LMBR1-222	ENST00000638959	PPARGC1B	Q86YN6	1023 aa	Known RBP	3.87	□□□□□ -1.79
LMBR1-222	ENST00000638959	TNFRSF25	Q93038	417 aa		3.87	□□□□□ -1.79
LMBR1-222	ENST00000638959	XAGE2	Q96GT9	111 aa		3.87	□□□□□ -1.79
LMBR1-222	ENST00000638959	MEGF10	Q96KG7	1140 aa		3.87	□□□□□ -1.79
LMBR1-222	ENST00000638959	ADAMTS4	O75173	837 aa		3.86	□□□□□ -1.79
LMBR1-222	ENST00000638959	NOS3	P29474	1203 aa		3.86	□□□□□ -1.79
LMBR1-222	ENST00000638959	ESCO1	Q5FWF5	840 aa		3.86	□□□□□ -1.79
LMBR1-222	ENST00000638959	FMR1NB	Q8N0W7	255 aa	Predicted RBP	3.86	□□□□□ -1.79
LMBR1-222	ENST00000638959	POU5F2	Q8N7G0	328 aa		3.86	□□□□□ -1.79
LMBR1-222	ENST00000638959	KRTAP9-7	A8MTY7	169 aa		3.85	□□□□□ -1.79
LMBR1-222	ENST00000638959	MYC	P01106	439 aa	Predicted RBP	3.85	□□□□□ -1.79
LMBR1-222	ENST00000638959	SPOCD1	Q6ZMY3	1216 aa		3.85	□□□□□ -1.79
LMBR1-222	ENST00000638959	C20orf204	Q6ZNR8	217 aa		3.85	□□□□□ -1.79
LMBR1-222	ENST00000638959	ZIC5	Q96T25	663 aa		3.85	□□□□□ -1.79
LMBR1-222	ENST00000638959	JPH1	Q9HDC5	661 aa	Predicted RBP	3.85	□□□□□ -1.79
LMBR1-222	ENST00000638959	ADGRE2	Q9UHX3	823 aa		3.85	□□□□□ -1.79
LMBR1-222	ENST00000638959	EFS	O43281	561 aa		3.84	□□□□□ -1.79
LMBR1-222	ENST00000638959	TAT	P17735	454 aa	Predicted RBP	3.84	□□□□□ -1.79
LMBR1-222	ENST00000638959	NBPF1	Q3BBV0	1214 aa		3.84	□□□□□ -1.79
LMBR1-222	ENST00000638959	POLR3E	Q9NVU0	708 aa		3.84	□□□□□ -1.79
LMBR1-222	ENST00000638959	ZBBX	A8MT70	800 aa		3.83	□□□□□ -1.8
LMBR1-222	ENST00000638959	GSC2	O15499	205 aa		3.83	□□□□□ -1.8

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