RNA–Protein interactions for RNA: ENST00000638462.1

AC055733.4-201, humanhuman

BASIC

Gene AC055733.4, Length 1,354 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055733.4-201ENST00000638462 YTHDC1Q96MU7 727 aaKnown RBP27.73■■■□□ 2.03
AC055733.4-201ENST00000638462 CNTNAP4Q9C0A0 1308 aa27.72■■■□□ 2.03
AC055733.4-201ENST00000638462 C4BP0C0L5 1744 aa27.72■■■□□ 2.03
AC055733.4-201ENST00000638462 STARD3NLO95772 234 aa27.72■■■□□ 2.03
AC055733.4-201ENST00000638462 CRKLP46109 303 aaKnown RBP27.72■■■□□ 2.03
AC055733.4-201ENST00000638462 EXOSC9Q06265 439 aaKnown RBP27.72■■■□□ 2.03
AC055733.4-201ENST00000638462 RC3H1Q5TC82 1133 aaKnown RBP27.72■■■□□ 2.03
AC055733.4-201ENST00000638462 MYH14Q7Z406 1995 aaKnown RBP27.71■■■□□ 2.03
AC055733.4-201ENST00000638462 ZNF827Q17R98 1081 aa27.71■■■□□ 2.03
AC055733.4-201ENST00000638462 INTS5Q6P9B9 1019 aaKnown RBP27.71■■■□□ 2.03
AC055733.4-201ENST00000638462 ELL2O00472 640 aaPredicted RBP27.7■■■□□ 2.02
AC055733.4-201ENST00000638462 LAMB4A4D0S4 1761 aa27.69■■■□□ 2.02
AC055733.4-201ENST00000638462 SOS1Q07889 1333 aaPredicted RBP27.69■■■□□ 2.02
AC055733.4-201ENST00000638462 A1BGP04217 495 aa27.68■■■□□ 2.02
AC055733.4-201ENST00000638462 CCDC87Q9NVE4 849 aa27.68■■■□□ 2.02
AC055733.4-201ENST00000638462 TWISTNBQ3B726 338 aaPredicted RBP27.67■■■□□ 2.02
AC055733.4-201ENST00000638462 ZBTB1Q9Y2K1 713 aa27.67■■■□□ 2.02
AC055733.4-201ENST00000638462 SLC15A2Q16348 729 aa27.66■■■□□ 2.02
AC055733.4-201ENST00000638462 AMIGO3Q86WK7 504 aa27.66■■■□□ 2.02
AC055733.4-201ENST00000638462 VAMP4O75379 141 aa27.65■■■□□ 2.02
AC055733.4-201ENST00000638462 EIF2S2P20042 333 aaKnown RBP27.65■■■□□ 2.02
AC055733.4-201ENST00000638462 AK7Q96M32 723 aa27.65■■■□□ 2.02
AC055733.4-201ENST00000638462 NBPF14Q5TI25 921 aa27.64■■■□□ 2.02
AC055733.4-201ENST00000638462 STK32BQ9NY57 414 aa27.64■■■□□ 2.02
AC055733.4-201ENST00000638462 NBPF26B4DH59 902 aa27.63■■■□□ 2.01
AC055733.4-201ENST00000638462 GNPATO15228 680 aa27.63■■■□□ 2.01
AC055733.4-201ENST00000638462 RPS6KA4O75676 772 aa27.63■■■□□ 2.01
AC055733.4-201ENST00000638462 HDGFL1Q5TGJ6 251 aa27.63■■■□□ 2.01
AC055733.4-201ENST00000638462 NBPF10Q6P3W6 841 aaKnown RBP27.63■■■□□ 2.01
AC055733.4-201ENST00000638462 NBPF15Q8N660 670 aa27.63■■■□□ 2.01
AC055733.4-201ENST00000638462 ERBB4Q15303 1308 aa27.63■■■□□ 2.01
AC055733.4-201ENST00000638462 PDIA6Q15084 440 aa27.62■■■□□ 2.01
AC055733.4-201ENST00000638462 UBR3Q6ZT12 1888 aa27.62■■■□□ 2.01
AC055733.4-201ENST00000638462 PIP4K2AP48426 406 aaPredicted RBP27.61■■■□□ 2.01
AC055733.4-201ENST00000638462 SMIM5Q71RC9 77 aa27.61■■■□□ 2.01
AC055733.4-201ENST00000638462 NECTIN2Q92692 538 aa27.61■■■□□ 2.01
AC055733.4-201ENST00000638462 CANXP27824 592 aaKnown RBP27.6■■■□□ 2.01
AC055733.4-201ENST00000638462 TFCP2L1Q9NZI6 479 aa27.6■■■□□ 2.01
AC055733.4-201ENST00000638462 TUBGCP6Q96RT7 1819 aa27.6■■■□□ 2.01
AC055733.4-201ENST00000638462 EIF5P55010 431 aaKnown RBP27.6■■■□□ 2.01
AC055733.4-201ENST00000638462 LRP10Q7Z4F1 713 aa27.6■■■□□ 2.01
AC055733.4-201ENST00000638462 RTCBQ9Y3I0 505 aaKnown RBP27.6■■■□□ 2.01
AC055733.4-201ENST00000638462 SSFA2P28290 1259 aa27.59■■■□□ 2.01
AC055733.4-201ENST00000638462 IL6STP40189 918 aaPredicted RBP27.59■■■□□ 2.01
AC055733.4-201ENST00000638462 PNPLA7Q6ZV29 1317 aa27.58■■■□□ 2.01
AC055733.4-201ENST00000638462 PROSER3Q2NL68 480 aa27.58■■■□□ 2.01
AC055733.4-201ENST00000638462 CCDC30Q5VVM6 783 aa27.58■■■□□ 2.01
AC055733.4-201ENST00000638462 CHMP4AQ9BY43 222 aa27.58■■■□□ 2.01
AC055733.4-201ENST00000638462 DDX21Q9NR30 783 aaKnown RBP eCLIP27.58■■■□□ 2.01
AC055733.4-201ENST00000638462 CHPF2Q9P2E5 772 aa27.58■■■□□ 2.01
AC055733.4-201ENST00000638462 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.57■■■□□ 2
AC055733.4-201ENST00000638462 QSER1Q2KHR3 1735 aa27.56■■■□□ 2
AC055733.4-201ENST00000638462 CT47B1P0C2W7 299 aaPredicted RBP27.56■■■□□ 2
AC055733.4-201ENST00000638462 ADRA2BP18089 450 aa27.56■■■□□ 2
AC055733.4-201ENST00000638462 DBF4Q9UBU7 674 aaPredicted RBP27.56■■■□□ 2
AC055733.4-201ENST00000638462 PHF14O94880 888 aa27.55■■■□□ 2
AC055733.4-201ENST00000638462 ANXA1P04083 346 aa27.55■■■□□ 2
AC055733.4-201ENST00000638462 R3HDM1Q15032 1099 aaKnown RBP27.55■■■□□ 2
AC055733.4-201ENST00000638462 COL15A1P39059 1388 aa27.54■■■□□ 2
AC055733.4-201ENST00000638462 COL23A1Q86Y22 540 aaPredicted RBP27.54■■■□□ 2
AC055733.4-201ENST00000638462 ARHGEF1Q92888 912 aaKnown RBP27.54■■■□□ 2
AC055733.4-201ENST00000638462 MYL6BP14649 208 aa27.53■■■□□ 2
AC055733.4-201ENST00000638462 TRAPPC3LQ5T215 181 aa27.53■■■□□ 2
AC055733.4-201ENST00000638462 FLAD1Q8NFF5 587 aa27.53■■■□□ 2
AC055733.4-201ENST00000638462 ZNF428Q96B54 188 aa27.53■■■□□ 2
AC055733.4-201ENST00000638462 TCERG1O14776 1098 aaKnown RBP27.52■■■□□ 2
AC055733.4-201ENST00000638462 PDGFDQ9GZP0 370 aaPredicted RBP27.51■■□□□ 1.99
AC055733.4-201ENST00000638462 PSDA5PKW4 1024 aaPredicted RBP27.49■■□□□ 1.99
AC055733.4-201ENST00000638462 STK31Q9BXU1 1019 aa27.49■■□□□ 1.99
AC055733.4-201ENST00000638462 HYPKQ9NX55 129 aa27.49■■□□□ 1.99
AC055733.4-201ENST00000638462 ZNF330Q9Y3S2 320 aaPredicted RBP27.49■■□□□ 1.99
AC055733.4-201ENST00000638462 C4AP0C0L4 1744 aa27.48■■□□□ 1.99
AC055733.4-201ENST00000638462 A0A087WZG4 1122 aa27.48■■□□□ 1.99
AC055733.4-201ENST00000638462 SLC4A2P04920 1241 aa27.48■■□□□ 1.99
AC055733.4-201ENST00000638462 SSH1Q8WYL5 1049 aa27.48■■□□□ 1.99
AC055733.4-201ENST00000638462 PHAXQ9H814 394 aaKnown RBP27.48■■□□□ 1.99
AC055733.4-201ENST00000638462 RFC4P35249 363 aa27.47■■□□□ 1.99
AC055733.4-201ENST00000638462 RARSP54136 660 aaKnown RBP27.47■■□□□ 1.99
AC055733.4-201ENST00000638462 ALDH1L2Q3SY69 923 aa27.47■■□□□ 1.99
AC055733.4-201ENST00000638462 TTLL7Q6ZT98 887 aa27.47■■□□□ 1.99
AC055733.4-201ENST00000638462 DZIP3Q86Y13 1208 aaKnown RBP27.47■■□□□ 1.99
AC055733.4-201ENST00000638462 TBC1D2BQ9UPU7 963 aa27.47■■□□□ 1.99
AC055733.4-201ENST00000638462 COPS6Q7L5N1 327 aa27.46■■□□□ 1.99
AC055733.4-201ENST00000638462 XAGE3Q8WTP9 111 aa27.46■■□□□ 1.99
AC055733.4-201ENST00000638462 SRP68Q9UHB9 627 aaKnown RBP27.46■■□□□ 1.99
AC055733.4-201ENST00000638462 NARFQ9UHQ1 456 aa27.46■■□□□ 1.99
AC055733.4-201ENST00000638462 USP42Q9H9J4 1324 aaKnown RBP27.46■■□□□ 1.99
AC055733.4-201ENST00000638462 CASZ1Q86V15 1759 aa27.46■■□□□ 1.99
AC055733.4-201ENST00000638462 CAMTA2O94983 1202 aa27.45■■□□□ 1.98
AC055733.4-201ENST00000638462 G2E3Q7L622 706 aa27.45■■□□□ 1.98
AC055733.4-201ENST00000638462 NPM2Q86SE8 214 aaKnown RBP27.45■■□□□ 1.98
AC055733.4-201ENST00000638462 CACNA1FO60840 1977 aa27.45■■□□□ 1.98
AC055733.4-201ENST00000638462 MRPL50Q8N5N7 158 aaKnown RBP27.44■■□□□ 1.98
AC055733.4-201ENST00000638462 MSH5O43196 834 aa27.43■■□□□ 1.98
AC055733.4-201ENST00000638462 AIMP1Q12904 312 aaKnown RBP27.43■■□□□ 1.98
AC055733.4-201ENST00000638462 BCL2L12Q9HB09 334 aa27.43■■□□□ 1.98
AC055733.4-201ENST00000638462 GYS1P13807 737 aa27.42■■□□□ 1.98
AC055733.4-201ENST00000638462 USPL1Q5W0Q7 1092 aa27.42■■□□□ 1.98
AC055733.4-201ENST00000638462 SLC16A10Q8TF71 515 aa27.42■■□□□ 1.98
AC055733.4-201ENST00000638462 BCL2L13Q9BXK5 485 aa27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms