RNA–Protein interactions for RNA: ENST00000638375.1

HLA-A-209, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 975 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-209ENST00000638375 AKT1S1Q96B36 256 aa25.16■■□□□ 1.62
HLA-A-209ENST00000638375 CNTNAP4Q9C0A0 1308 aa25.15■■□□□ 1.62
HLA-A-209ENST00000638375 ELL2O00472 640 aaPredicted RBP25.15■■□□□ 1.62
HLA-A-209ENST00000638375 CRKLP46109 303 aaKnown RBP25.15■■□□□ 1.62
HLA-A-209ENST00000638375 LAMB4A4D0S4 1761 aa25.15■■□□□ 1.62
HLA-A-209ENST00000638375 HOXB7P09629 217 aa25.14■■□□□ 1.62
HLA-A-209ENST00000638375 STARD3NLO95772 234 aa25.13■■□□□ 1.61
HLA-A-209ENST00000638375 RC3H1Q5TC82 1133 aaKnown RBP25.13■■□□□ 1.61
HLA-A-209ENST00000638375 INTS5Q6P9B9 1019 aaKnown RBP25.13■■□□□ 1.61
HLA-A-209ENST00000638375 HMGB2P26583 209 aaKnown RBP25.12■■□□□ 1.61
HLA-A-209ENST00000638375 CCDC87Q9NVE4 849 aa25.12■■□□□ 1.61
HLA-A-209ENST00000638375 ZBTB1Q9Y2K1 713 aa25.12■■□□□ 1.61
HLA-A-209ENST00000638375 MYH14Q7Z406 1995 aaKnown RBP25.12■■□□□ 1.61
HLA-A-209ENST00000638375 A1BGP04217 495 aa25.11■■□□□ 1.61
HLA-A-209ENST00000638375 EIF2S2P20042 333 aaKnown RBP25.11■■□□□ 1.61
HLA-A-209ENST00000638375 SLC15A2Q16348 729 aa25.11■■□□□ 1.61
HLA-A-209ENST00000638375 TWISTNBQ3B726 338 aaPredicted RBP25.11■■□□□ 1.61
HLA-A-209ENST00000638375 AMIGO3Q86WK7 504 aa25.11■■□□□ 1.61
HLA-A-209ENST00000638375 AK7Q96M32 723 aa25.11■■□□□ 1.61
HLA-A-209ENST00000638375 STK32BQ9NY57 414 aa25.11■■□□□ 1.61
HLA-A-209ENST00000638375 NBPF14Q5TI25 921 aa25.1■■□□□ 1.61
HLA-A-209ENST00000638375 GNPATO15228 680 aa25.09■■□□□ 1.61
HLA-A-209ENST00000638375 PIP4K2AP48426 406 aaPredicted RBP25.09■■□□□ 1.61
HLA-A-209ENST00000638375 NECTIN2Q92692 538 aa25.09■■□□□ 1.61
HLA-A-209ENST00000638375 SOS1Q07889 1333 aaPredicted RBP25.09■■□□□ 1.61
HLA-A-209ENST00000638375 NBPF26B4DH59 902 aa25.08■■□□□ 1.61
HLA-A-209ENST00000638375 HDGFL1Q5TGJ6 251 aa25.08■■□□□ 1.61
HLA-A-209ENST00000638375 NBPF10Q6P3W6 841 aaKnown RBP25.08■■□□□ 1.61
HLA-A-209ENST00000638375 SMIM5Q71RC9 77 aa25.08■■□□□ 1.61
HLA-A-209ENST00000638375 NBPF15Q8N660 670 aa25.08■■□□□ 1.61
HLA-A-209ENST00000638375 VAMP4O75379 141 aa25.07■■□□□ 1.6
HLA-A-209ENST00000638375 RPS6KA4O75676 772 aa25.07■■□□□ 1.6
HLA-A-209ENST00000638375 CANXP27824 592 aaKnown RBP25.07■■□□□ 1.6
HLA-A-209ENST00000638375 TFCP2L1Q9NZI6 479 aa25.06■■□□□ 1.6
HLA-A-209ENST00000638375 TUBGCP6Q96RT7 1819 aa25.06■■□□□ 1.6
HLA-A-209ENST00000638375 UBR3Q6ZT12 1888 aa25.06■■□□□ 1.6
HLA-A-209ENST00000638375 PDIA6Q15084 440 aa25.05■■□□□ 1.6
HLA-A-209ENST00000638375 ERBB4Q15303 1308 aa25.05■■□□□ 1.6
HLA-A-209ENST00000638375 RTCBQ9Y3I0 505 aaKnown RBP25.04■■□□□ 1.6
HLA-A-209ENST00000638375 PNPLA7Q6ZV29 1317 aa25.04■■□□□ 1.6
HLA-A-209ENST00000638375 ANXA1P04083 346 aa25.03■■□□□ 1.6
HLA-A-209ENST00000638375 IL6STP40189 918 aaPredicted RBP25.03■■□□□ 1.6
HLA-A-209ENST00000638375 PROSER3Q2NL68 480 aa25.03■■□□□ 1.6
HLA-A-209ENST00000638375 CHPF2Q9P2E5 772 aa25.03■■□□□ 1.6
HLA-A-209ENST00000638375 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.02■■□□□ 1.6
HLA-A-209ENST00000638375 PHF14O94880 888 aa25.02■■□□□ 1.6
HLA-A-209ENST00000638375 SSFA2P28290 1259 aa25.02■■□□□ 1.6
HLA-A-209ENST00000638375 EIF5P55010 431 aaKnown RBP25.02■■□□□ 1.6
HLA-A-209ENST00000638375 R3HDM1Q15032 1099 aaKnown RBP25.02■■□□□ 1.6
HLA-A-209ENST00000638375 LRP10Q7Z4F1 713 aa25.02■■□□□ 1.6
HLA-A-209ENST00000638375 TCERG1O14776 1098 aaKnown RBP25.01■■□□□ 1.59
HLA-A-209ENST00000638375 MYL6BP14649 208 aa25.01■■□□□ 1.59
HLA-A-209ENST00000638375 CCDC30Q5VVM6 783 aa25.01■■□□□ 1.59
HLA-A-209ENST00000638375 COL15A1P39059 1388 aa25.01■■□□□ 1.59
HLA-A-209ENST00000638375 QSER1Q2KHR3 1735 aa25■■□□□ 1.59
HLA-A-209ENST00000638375 COL23A1Q86Y22 540 aaPredicted RBP25■■□□□ 1.59
HLA-A-209ENST00000638375 DDX21Q9NR30 783 aaKnown RBP eCLIP25■■□□□ 1.59
HLA-A-209ENST00000638375 ZNF330Q9Y3S2 320 aaPredicted RBP25■■□□□ 1.59
HLA-A-209ENST00000638375 PSDA5PKW4 1024 aaPredicted RBP24.99■■□□□ 1.59
HLA-A-209ENST00000638375 ARHGEF1Q92888 912 aaKnown RBP24.99■■□□□ 1.59
HLA-A-209ENST00000638375 DBF4Q9UBU7 674 aaPredicted RBP24.99■■□□□ 1.59
HLA-A-209ENST00000638375 CT47B1P0C2W7 299 aaPredicted RBP24.98■■□□□ 1.59
HLA-A-209ENST00000638375 ADRA2BP18089 450 aa24.98■■□□□ 1.59
HLA-A-209ENST00000638375 TRAPPC3LQ5T215 181 aa24.98■■□□□ 1.59
HLA-A-209ENST00000638375 PDGFDQ9GZP0 370 aaPredicted RBP24.98■■□□□ 1.59
HLA-A-209ENST00000638375 FLAD1Q8NFF5 587 aa24.97■■□□□ 1.59
HLA-A-209ENST00000638375 CHMP4AQ9BY43 222 aa24.97■■□□□ 1.59
HLA-A-209ENST00000638375 C4AP0C0L4 1744 aa24.96■■□□□ 1.59
HLA-A-209ENST00000638375 STK31Q9BXU1 1019 aa24.95■■□□□ 1.58
HLA-A-209ENST00000638375 A0A087WZG4 1122 aa24.94■■□□□ 1.58
HLA-A-209ENST00000638375 TTLL7Q6ZT98 887 aa24.94■■□□□ 1.58
HLA-A-209ENST00000638375 ZNF428Q96B54 188 aa24.94■■□□□ 1.58
HLA-A-209ENST00000638375 HYPKQ9NX55 129 aa24.94■■□□□ 1.58
HLA-A-209ENST00000638375 SRP68Q9UHB9 627 aaKnown RBP24.94■■□□□ 1.58
HLA-A-209ENST00000638375 CASZ1Q86V15 1759 aa24.93■■□□□ 1.58
HLA-A-209ENST00000638375 SLC4A2P04920 1241 aa24.93■■□□□ 1.58
HLA-A-209ENST00000638375 XAGE3Q8WTP9 111 aa24.93■■□□□ 1.58
HLA-A-209ENST00000638375 SSH1Q8WYL5 1049 aa24.93■■□□□ 1.58
HLA-A-209ENST00000638375 PHAXQ9H814 394 aaKnown RBP24.93■■□□□ 1.58
HLA-A-209ENST00000638375 TBC1D2BQ9UPU7 963 aa24.93■■□□□ 1.58
HLA-A-209ENST00000638375 USP42Q9H9J4 1324 aaKnown RBP24.92■■□□□ 1.58
HLA-A-209ENST00000638375 MSH5O43196 834 aa24.92■■□□□ 1.58
HLA-A-209ENST00000638375 RFC4P35249 363 aa24.92■■□□□ 1.58
HLA-A-209ENST00000638375 COPS6Q7L5N1 327 aa24.92■■□□□ 1.58
HLA-A-209ENST00000638375 NPM2Q86SE8 214 aaKnown RBP24.92■■□□□ 1.58
HLA-A-209ENST00000638375 DZIP3Q86Y13 1208 aaKnown RBP24.92■■□□□ 1.58
HLA-A-209ENST00000638375 NARFQ9UHQ1 456 aa24.92■■□□□ 1.58
HLA-A-209ENST00000638375 G2E3Q7L622 706 aa24.91■■□□□ 1.58
HLA-A-209ENST00000638375 CAMTA2O94983 1202 aa24.9■■□□□ 1.58
HLA-A-209ENST00000638375 RARSP54136 660 aaKnown RBP24.9■■□□□ 1.58
HLA-A-209ENST00000638375 AIMP1Q12904 312 aaKnown RBP24.9■■□□□ 1.58
HLA-A-209ENST00000638375 ALDH1L2Q3SY69 923 aa24.9■■□□□ 1.58
HLA-A-209ENST00000638375 MRPL50Q8N5N7 158 aaKnown RBP24.9■■□□□ 1.58
HLA-A-209ENST00000638375 ARXQ96QS3 562 aa24.9■■□□□ 1.58
HLA-A-209ENST00000638375 BCL2L13Q9BXK5 485 aa24.9■■□□□ 1.58
HLA-A-209ENST00000638375 USPL1Q5W0Q7 1092 aa24.89■■□□□ 1.58
HLA-A-209ENST00000638375 BCL2L12Q9HB09 334 aa24.89■■□□□ 1.58
HLA-A-209ENST00000638375 SCN7AQ01118 1682 aa24.88■■□□□ 1.57
HLA-A-209ENST00000638375 MAP3K15Q6ZN16 1313 aa24.87■■□□□ 1.57
HLA-A-209ENST00000638375 ZPR1O75312 459 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 568 ms