RNA–Protein interactions for RNA: ENST00000637278.1

CLN5-217, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 2

Gene CLN5, Length 2,863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-217ENST00000637278 COL22A1Q8NFW1 1626 aaPredicted RBP9.64□□□□□ -0.87
CLN5-217ENST00000637278 CCDC189A1A4V9 331 aa9.64□□□□□ -0.87
CLN5-217ENST00000637278 GOLIM4O00461 696 aa9.64□□□□□ -0.87
CLN5-217ENST00000637278 TMEM164Q5U3C3 297 aa9.64□□□□□ -0.87
CLN5-217ENST00000637278 BRINP3Q76B58 766 aa9.64□□□□□ -0.87
CLN5-217ENST00000637278 ATL2Q8NHH9 583 aa9.64□□□□□ -0.87
CLN5-217ENST00000637278 C8orf37Q96NL8 207 aa9.64□□□□□ -0.87
CLN5-217ENST00000637278 ZBTB47Q9UFB7 747 aaPredicted RBP9.64□□□□□ -0.87
CLN5-217ENST00000637278 KIF1AQ12756 1690 aa9.63□□□□□ -0.87
CLN5-217ENST00000637278 CT47B1P0C2W7 299 aaPredicted RBP9.63□□□□□ -0.87
CLN5-217ENST00000637278 NUTM2DQ5VT03 806 aaPredicted RBP9.63□□□□□ -0.87
CLN5-217ENST00000637278 C11orf96Q7Z7L8 435 aa9.63□□□□□ -0.87
CLN5-217ENST00000637278 ZSWIM4Q9H7M6 989 aa9.63□□□□□ -0.87
CLN5-217ENST00000637278 RGS17Q9UGC6 210 aaPredicted RBP9.63□□□□□ -0.87
CLN5-217ENST00000637278 LRP6O75581 1613 aa9.63□□□□□ -0.87
CLN5-217ENST00000637278 LGR5O75473 907 aa9.63□□□□□ -0.87
CLN5-217ENST00000637278 PRIM1P49642 420 aaKnown RBP9.63□□□□□ -0.87
CLN5-217ENST00000637278 EVA1CP58658 441 aa9.63□□□□□ -0.87
CLN5-217ENST00000637278 MEX3CQ5U5Q3 659 aaKnown RBP9.63□□□□□ -0.87
CLN5-217ENST00000637278 TSR2Q969E8 191 aaKnown RBP9.63□□□□□ -0.87
CLN5-217ENST00000637278 MYOM2P54296 1465 aa9.63□□□□□ -0.87
CLN5-217ENST00000637278 C1orf167Q5SNV9 1468 aa9.63□□□□□ -0.87
CLN5-217ENST00000637278 HDLBPQ00341 1268 aaKnown RBP9.62□□□□□ -0.87
CLN5-217ENST00000637278 MYSM1Q5VVJ2 828 aa9.62□□□□□ -0.87
CLN5-217ENST00000637278 CCDC146Q8IYE0 955 aa9.62□□□□□ -0.87
CLN5-217ENST00000637278 RNF217Q8TC41 542 aa9.62□□□□□ -0.87
CLN5-217ENST00000637278 RBM33Q96EV2 1170 aaKnown RBP9.62□□□□□ -0.87
CLN5-217ENST00000637278 MKRN1Q9UHC7 482 aaKnown RBP9.62□□□□□ -0.87
CLN5-217ENST00000637278 SPATA31E1Q6ZUB1 1445 aa9.62□□□□□ -0.87
CLN5-217ENST00000637278 MARSP56192 900 aaKnown RBP9.62□□□□□ -0.87
CLN5-217ENST00000637278 BMS1Q14692 1282 aaKnown RBP9.62□□□□□ -0.87
CLN5-217ENST00000637278 RPUSD2Q8IZ73 545 aaKnown RBP9.62□□□□□ -0.87
CLN5-217ENST00000637278 BANK1Q8NDB2 785 aa9.62□□□□□ -0.87
CLN5-217ENST00000637278 LRRC59Q96AG4 307 aaKnown RBP9.62□□□□□ -0.87
CLN5-217ENST00000637278 LIMD1Q9UGP4 676 aa9.62□□□□□ -0.87
CLN5-217ENST00000637278 ZMIZ1Q9ULJ6 1067 aa9.62□□□□□ -0.87
CLN5-217ENST00000637278 DHX16O60231 1041 aaKnown RBP9.61□□□□□ -0.87
CLN5-217ENST00000637278 MYBPC2Q14324 1141 aa9.61□□□□□ -0.87
CLN5-217ENST00000637278 NBPF9Q3BBW0 867 aa9.61□□□□□ -0.87
CLN5-217ENST00000637278 ZBTB9Q96C00 473 aa9.61□□□□□ -0.87
CLN5-217ENST00000637278 FAM212AQ96EL1 285 aa9.61□□□□□ -0.87
CLN5-217ENST00000637278 PIK3R5Q8WYR1 880 aa9.61□□□□□ -0.87
CLN5-217ENST00000637278 LRPPRCP42704 1394 aaKnown RBP9.6□□□□□ -0.87
CLN5-217ENST00000637278 DNAJA1P31689 397 aaKnown RBP9.6□□□□□ -0.87
CLN5-217ENST00000637278 MAP2K1Q02750 393 aaPredicted RBP9.6□□□□□ -0.87
CLN5-217ENST00000637278 CBLBQ13191 982 aa9.6□□□□□ -0.87
CLN5-217ENST00000637278 SDE2Q6IQ49 451 aa9.6□□□□□ -0.87
CLN5-217ENST00000637278 EFCAB3Q8N7B9 438 aa9.6□□□□□ -0.87
CLN5-217ENST00000637278 PIK3C2GO75747 1445 aa9.6□□□□□ -0.87
CLN5-217ENST00000637278 PNPLA6Q8IY17 1366 aa9.6□□□□□ -0.87
CLN5-217ENST00000637278 SSFA2P28290 1259 aa9.6□□□□□ -0.87
CLN5-217ENST00000637278 PRKAG2Q9UGJ0 569 aa9.6□□□□□ -0.87
CLN5-217ENST00000637278 NRXN1Q9ULB1 1477 aa9.6□□□□□ -0.87
CLN5-217ENST00000637278 FMN2Q9NZ56 1722 aa9.59□□□□□ -0.87
CLN5-217ENST00000637278 RAD51AP2Q09MP3 1159 aa9.59□□□□□ -0.87
CLN5-217ENST00000637278 FBXO22Q8NEZ5 403 aa9.59□□□□□ -0.87
CLN5-217ENST00000637278 ROBO2Q9HCK4 1378 aa9.59□□□□□ -0.87
CLN5-217ENST00000637278 GNPATO15228 680 aa9.59□□□□□ -0.87
CLN5-217ENST00000637278 IGBP1P78318 339 aa9.59□□□□□ -0.87
CLN5-217ENST00000637278 POTEAQ6S8J7 498 aa9.59□□□□□ -0.87
CLN5-217ENST00000637278 TMA7Q9Y2S6 64 aaKnown RBP9.59□□□□□ -0.87
CLN5-217ENST00000637278 DLC1Q96QB1 1528 aa9.58□□□□□ -0.88
CLN5-217ENST00000637278 GPR37L1O60883 481 aa9.58□□□□□ -0.88
CLN5-217ENST00000637278 MTMR3Q13615 1198 aa9.58□□□□□ -0.88
CLN5-217ENST00000637278 ABCC11Q96J66 1382 aa9.58□□□□□ -0.88
CLN5-217ENST00000637278 MARF1Q9Y4F3 1742 aaKnown RBP9.58□□□□□ -0.88
CLN5-217ENST00000637278 QPCTQ16769 361 aa9.58□□□□□ -0.88
CLN5-217ENST00000637278 GET4Q7L5D6 327 aaPredicted RBP9.58□□□□□ -0.88
CLN5-217ENST00000637278 PNNQ9H307 717 aaKnown RBP9.58□□□□□ -0.88
CLN5-217ENST00000637278 WDHD1O75717 1129 aaPredicted RBP9.57□□□□□ -0.88
CLN5-217ENST00000637278 LDLRAD1Q5T700 205 aa9.57□□□□□ -0.88
CLN5-217ENST00000637278 UTP14CQ5TAP6 766 aaKnown RBP9.57□□□□□ -0.88
CLN5-217ENST00000637278 FMNL3Q8IVF7 1028 aa9.57□□□□□ -0.88
CLN5-217ENST00000637278 LONRF3Q496Y0 759 aa9.57□□□□□ -0.88
CLN5-217ENST00000637278 MPHOSPH9Q99550 1183 aa9.57□□□□□ -0.88
CLN5-217ENST00000637278 SOS2Q07890 1332 aaPredicted RBP9.57□□□□□ -0.88
CLN5-217ENST00000637278 ADGRB2O60241 1585 aa9.57□□□□□ -0.88
CLN5-217ENST00000637278 TLDC2A0PJX2 215 aa9.57□□□□□ -0.88
CLN5-217ENST00000637278 GOLGA6CA6NDK9 693 aa9.57□□□□□ -0.88
CLN5-217ENST00000637278 GOLGA6BA6NDN3 693 aa9.57□□□□□ -0.88
CLN5-217ENST00000637278 GOLGA6DP0CG33 693 aa9.57□□□□□ -0.88
CLN5-217ENST00000637278 TNNT2P45379 298 aaPredicted RBP9.57□□□□□ -0.88
CLN5-217ENST00000637278 NT5DC4Q86YG4 428 aa9.57□□□□□ -0.88
CLN5-217ENST00000637278 CREBRFQ8IUR6 639 aa9.57□□□□□ -0.88
CLN5-217ENST00000637278 GOLGA6AQ9NYA3 693 aa9.57□□□□□ -0.88
CLN5-217ENST00000637278 GNEQ9Y223 722 aaKnown RBP9.57□□□□□ -0.88
CLN5-217ENST00000637278 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.56□□□□□ -0.88
CLN5-217ENST00000637278 NPHP3Q7Z494 1330 aa9.56□□□□□ -0.88
CLN5-217ENST00000637278 SCP2P22307 547 aa9.56□□□□□ -0.88
CLN5-217ENST00000637278 APLP1P51693 650 aa9.56□□□□□ -0.88
CLN5-217ENST00000637278 ENOX2Q16206 610 aaKnown RBP9.56□□□□□ -0.88
CLN5-217ENST00000637278 MTA3Q9BTC8 594 aa9.56□□□□□ -0.88
CLN5-217ENST00000637278 RRAGDQ9NQL2 400 aaPredicted RBP9.56□□□□□ -0.88
CLN5-217ENST00000637278 GEMIN8Q9NWZ8 242 aaKnown RBP9.56□□□□□ -0.88
CLN5-217ENST00000637278 HOXA2O43364 376 aa9.56□□□□□ -0.88
CLN5-217ENST00000637278 KCNB2Q92953 911 aa9.56□□□□□ -0.88
CLN5-217ENST00000637278 CRISPLD2Q9H0B8 497 aa9.56□□□□□ -0.88
CLN5-217ENST00000637278 EIF3AQ14152 1382 aaKnown RBP9.56□□□□□ -0.88
CLN5-217ENST00000637278 SSTR3P32745 418 aaPredicted RBP9.55□□□□□ -0.88
CLN5-217ENST00000637278 MAMSTRQ6ZN01 415 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms