RNA–Protein interactions for RNA: ENST00000637117.1

CACNA1A-236, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,124 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-236ENST00000637117 LOC102724428A0A0B4J2F2 783 aa12.8□□□□□ -0.36
CACNA1A-236ENST00000637117 KIF3CO14782 793 aa12.8□□□□□ -0.36
CACNA1A-236ENST00000637117 SSFA2P28290 1259 aa12.8□□□□□ -0.36
CACNA1A-236ENST00000637117 SIK1P57059 783 aa12.8□□□□□ -0.36
CACNA1A-236ENST00000637117 PPP1R15BQ5SWA1 713 aa12.8□□□□□ -0.36
CACNA1A-236ENST00000637117 SMYD5Q6GMV2 418 aa12.8□□□□□ -0.36
CACNA1A-236ENST00000637117 C4BP0C0L5 1744 aa12.79□□□□□ -0.36
CACNA1A-236ENST00000637117 TMF1P82094 1093 aa12.79□□□□□ -0.36
CACNA1A-236ENST00000637117 LINC00116Q8NCU8 138 aa12.79□□□□□ -0.36
CACNA1A-236ENST00000637117 SPG7Q9UQ90 795 aa12.79□□□□□ -0.36
CACNA1A-236ENST00000637117 FLT4P35916 1363 aa12.79□□□□□ -0.36
CACNA1A-236ENST00000637117 NSD3Q9BZ95 1437 aa12.79□□□□□ -0.36
CACNA1A-236ENST00000637117 TMEM132AQ24JP5 1023 aa12.78□□□□□ -0.36
CACNA1A-236ENST00000637117 KIF24Q5T7B8 1368 aa12.78□□□□□ -0.36
CACNA1A-236ENST00000637117 ITGB4P16144 1822 aa12.77□□□□□ -0.37
CACNA1A-236ENST00000637117 GNPATO15228 680 aa12.77□□□□□ -0.37
CACNA1A-236ENST00000637117 ATP6V1AP38606 617 aa12.77□□□□□ -0.37
CACNA1A-236ENST00000637117 GPHNQ9NQX3 736 aaPredicted RBP12.77□□□□□ -0.37
CACNA1A-236ENST00000637117 TMOD3Q9NYL9 352 aa12.77□□□□□ -0.37
CACNA1A-236ENST00000637117 ASAP1Q9ULH1 1129 aa12.77□□□□□ -0.37
CACNA1A-236ENST00000637117 EMILIN1Q9Y6C2 1016 aa12.77□□□□□ -0.37
CACNA1A-236ENST00000637117 UBR3Q6ZT12 1888 aa12.76□□□□□ -0.37
CACNA1A-236ENST00000637117 PPM1GO15355 546 aaPredicted RBP12.76□□□□□ -0.37
CACNA1A-236ENST00000637117 MMP10P09238 476 aa12.76□□□□□ -0.37
CACNA1A-236ENST00000637117 APLP1P51693 650 aa12.76□□□□□ -0.37
CACNA1A-236ENST00000637117 TGFB2P61812 414 aa12.76□□□□□ -0.37
CACNA1A-236ENST00000637117 ITPK1Q13572 414 aa12.76□□□□□ -0.37
CACNA1A-236ENST00000637117 DPY19L2Q6NUT2 758 aa12.75□□□□□ -0.37
CACNA1A-236ENST00000637117 CARD14Q9BXL6 1004 aa12.75□□□□□ -0.37
CACNA1A-236ENST00000637117 TOGARAM1Q9Y4F4 1720 aa12.75□□□□□ -0.37
CACNA1A-236ENST00000637117 A0A0G2JLW4 131 aa12.74□□□□□ -0.37
CACNA1A-236ENST00000637117 TOMM70O94826 608 aa12.74□□□□□ -0.37
CACNA1A-236ENST00000637117 CDCA8Q53HL2 280 aa12.74□□□□□ -0.37
CACNA1A-236ENST00000637117 TRAPPC3LQ5T215 181 aa12.74□□□□□ -0.37
CACNA1A-236ENST00000637117 ARHGAP27Q6ZUM4 889 aa12.74□□□□□ -0.37
CACNA1A-236ENST00000637117 MICALL2Q8IY33 904 aa12.74□□□□□ -0.37
CACNA1A-236ENST00000637117 IFNL2Q8IZJ0 200 aa12.74□□□□□ -0.37
CACNA1A-236ENST00000637117 EYA1Q99502 592 aa12.74□□□□□ -0.37
CACNA1A-236ENST00000637117 ATG3Q9NT62 314 aa12.74□□□□□ -0.37
CACNA1A-236ENST00000637117 BCS1LQ9Y276 419 aa12.74□□□□□ -0.37
CACNA1A-236ENST00000637117 WASHC2AQ641Q2 1341 aa12.73□□□□□ -0.37
CACNA1A-236ENST00000637117 PHKG2P15735 406 aa12.73□□□□□ -0.37
CACNA1A-236ENST00000637117 NLGN1Q8N2Q7 840 aa12.73□□□□□ -0.37
CACNA1A-236ENST00000637117 DNAJC5GQ8N7S2 189 aa12.73□□□□□ -0.37
CACNA1A-236ENST00000637117 RTCBQ9Y3I0 505 aaKnown RBP12.73□□□□□ -0.37
CACNA1A-236ENST00000637117 MAP2P11137 1827 aaKnown RBP12.73□□□□□ -0.37
CACNA1A-236ENST00000637117 HAX1O00165 279 aa12.72□□□□□ -0.37
CACNA1A-236ENST00000637117 BRPF1P55201 1214 aaPredicted RBP12.72□□□□□ -0.37
CACNA1A-236ENST00000637117 PDCD7Q8N8D1 485 aaKnown RBP12.72□□□□□ -0.37
CACNA1A-236ENST00000637117 GTF3C3Q9Y5Q9 886 aa12.72□□□□□ -0.37
CACNA1A-236ENST00000637117 NCAPD2Q15021 1401 aa12.71□□□□□ -0.37
CACNA1A-236ENST00000637117 PKD1L3Q7Z443 1732 aa12.71□□□□□ -0.37
CACNA1A-236ENST00000637117 SLC24A3Q9HC58 644 aa12.71□□□□□ -0.37
CACNA1A-236ENST00000637117 PXDNLA1KZ92 1463 aa12.71□□□□□ -0.38
CACNA1A-236ENST00000637117 FCHSD2O94868 740 aa12.7□□□□□ -0.38
CACNA1A-236ENST00000637117 DPEP1P16444 411 aa12.7□□□□□ -0.38
CACNA1A-236ENST00000637117 CLCN6P51797 869 aa12.7□□□□□ -0.38
CACNA1A-236ENST00000637117 DSG2Q14126 1118 aa12.7□□□□□ -0.38
CACNA1A-236ENST00000637117 RC3H1Q5TC82 1133 aaKnown RBP12.7□□□□□ -0.38
CACNA1A-236ENST00000637117 NMRK2Q9NPI5 230 aa12.7□□□□□ -0.38
CACNA1A-236ENST00000637117 CCDC87Q9NVE4 849 aa12.7□□□□□ -0.38
CACNA1A-236ENST00000637117 KIF20BQ96Q89 1820 aa12.69□□□□□ -0.38
CACNA1A-236ENST00000637117 GYS1P13807 737 aa12.69□□□□□ -0.38
CACNA1A-236ENST00000637117 RFC4P35249 363 aa12.69□□□□□ -0.38
CACNA1A-236ENST00000637117 ATN1P54259 1190 aaPredicted RBP12.69□□□□□ -0.38
CACNA1A-236ENST00000637117 TMC2Q8TDI7 906 aa12.69□□□□□ -0.38
CACNA1A-236ENST00000637117 SLC4A9Q96Q91 983 aa12.69□□□□□ -0.38
CACNA1A-236ENST00000637117 POLKQ9UBT6 870 aa12.69□□□□□ -0.38
CACNA1A-236ENST00000637117 PARP3Q9Y6F1 533 aa12.69□□□□□ -0.38
CACNA1A-236ENST00000637117 CICQ96RK0 1608 aaPredicted RBP12.69□□□□□ -0.38
CACNA1A-236ENST00000637117 ERVV-2B6SEH9 535 aa12.68□□□□□ -0.38
CACNA1A-236ENST00000637117 DPYSL4O14531 572 aa12.68□□□□□ -0.38
CACNA1A-236ENST00000637117 RPS6KA4O75676 772 aa12.68□□□□□ -0.38
CACNA1A-236ENST00000637117 ZMYND10O75800 440 aa12.68□□□□□ -0.38
CACNA1A-236ENST00000637117 MLLT3P42568 568 aaPredicted RBP12.68□□□□□ -0.38
CACNA1A-236ENST00000637117 C9orf131Q5VYM1 1079 aa12.68□□□□□ -0.38
CACNA1A-236ENST00000637117 N4BP2Q86UW6 1770 aaPredicted RBP12.68□□□□□ -0.38
CACNA1A-236ENST00000637117 KIF13BQ9NQT8 1826 aa12.67□□□□□ -0.38
CACNA1A-236ENST00000637117 KCNA3P22001 575 aa12.67□□□□□ -0.38
CACNA1A-236ENST00000637117 EIF4A2Q14240 407 aaKnown RBP12.67□□□□□ -0.38
CACNA1A-236ENST00000637117 C16orf71Q8IYS4 520 aaPredicted RBP12.67□□□□□ -0.38
CACNA1A-236ENST00000637117 RBM46Q8TBY0 533 aaKnown RBP12.67□□□□□ -0.38
CACNA1A-236ENST00000637117 EMILIN3Q9NT22 766 aa12.67□□□□□ -0.38
CACNA1A-236ENST00000637117 C10orf71Q711Q0 1435 aa12.66□□□□□ -0.38
CACNA1A-236ENST00000637117 HSP90AB1P08238 724 aaKnown RBP12.66□□□□□ -0.38
CACNA1A-236ENST00000637117 EVX2Q03828 476 aa12.66□□□□□ -0.38
CACNA1A-236ENST00000637117 NEUROD2Q15784 382 aa12.66□□□□□ -0.38
CACNA1A-236ENST00000637117 DCAF5Q96JK2 942 aa12.66□□□□□ -0.38
CACNA1A-236ENST00000637117 PIM2Q9P1W9 311 aa12.66□□□□□ -0.38
CACNA1A-236ENST00000637117 TIMELESSQ9UNS1 1208 aa12.66□□□□□ -0.38
CACNA1A-236ENST00000637117 CNTNAP4Q9C0A0 1308 aa12.65□□□□□ -0.38
CACNA1A-236ENST00000637117 IRX5P78411 483 aaPredicted RBP12.65□□□□□ -0.38
CACNA1A-236ENST00000637117 PLEKHO1Q53GL0 409 aaPredicted RBP12.65□□□□□ -0.38
CACNA1A-236ENST00000637117 KDRP35968 1356 aa12.65□□□□□ -0.38
CACNA1A-236ENST00000637117 KIAA1551Q9HCM1 1747 aa12.65□□□□□ -0.38
CACNA1A-236ENST00000637117 ATMINO43313 823 aaPredicted RBP12.64□□□□□ -0.39
CACNA1A-236ENST00000637117 TNNT2P45379 298 aaPredicted RBP12.64□□□□□ -0.39
CACNA1A-236ENST00000637117 CABP4P57796 275 aa12.64□□□□□ -0.39
CACNA1A-236ENST00000637117 HTRA3P83110 453 aa12.64□□□□□ -0.39
CACNA1A-236ENST00000637117 FOXK1P85037 733 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms