RNA–Protein interactions for RNA: ENST00000635084.1

ATRIP-206, Transcript of ATR interacting protein, humanhuman

TSL 4

Gene ATRIP, Length 545 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-206ENST00000635084 NEUROD2Q15784 382 aa12.22□□□□□ -0.45
ATRIP-206ENST00000635084 RC3H1Q5TC82 1133 aaKnown RBP12.22□□□□□ -0.45
ATRIP-206ENST00000635084 DNAJC10Q8IXB1 793 aa12.22□□□□□ -0.45
ATRIP-206ENST00000635084 VSIG10Q8N0Z9 540 aa12.22□□□□□ -0.45
ATRIP-206ENST00000635084 APAF1O14727 1248 aa12.21□□□□□ -0.45
ATRIP-206ENST00000635084 GNPATO15228 680 aa12.21□□□□□ -0.45
ATRIP-206ENST00000635084 ZBTB7AO95365 584 aa12.21□□□□□ -0.45
ATRIP-206ENST00000635084 COL23A1Q86Y22 540 aaPredicted RBP12.21□□□□□ -0.45
ATRIP-206ENST00000635084 FMNL2Q96PY5 1086 aa12.21□□□□□ -0.45
ATRIP-206ENST00000635084 TRIM35Q9UPQ4 493 aa12.21□□□□□ -0.45
ATRIP-206ENST00000635084 CYP19A1P11511 503 aaPredicted RBP12.2□□□□□ -0.46
ATRIP-206ENST00000635084 SSFA2P28290 1259 aa12.2□□□□□ -0.46
ATRIP-206ENST00000635084 CRKLP46109 303 aaKnown RBP12.2□□□□□ -0.46
ATRIP-206ENST00000635084 SMIM5Q71RC9 77 aa12.2□□□□□ -0.46
ATRIP-206ENST00000635084 FLAD1Q8NFF5 587 aa12.2□□□□□ -0.46
ATRIP-206ENST00000635084 SLC16A10Q8TF71 515 aa12.2□□□□□ -0.46
ATRIP-206ENST00000635084 MTFR1LQ9H019 292 aa12.2□□□□□ -0.46
ATRIP-206ENST00000635084 SPON1Q9HCB6 807 aa12.2□□□□□ -0.46
ATRIP-206ENST00000635084 MIS18AQ9NYP9 233 aa12.2□□□□□ -0.46
ATRIP-206ENST00000635084 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.19□□□□□ -0.46
ATRIP-206ENST00000635084 PHF14O94880 888 aa12.19□□□□□ -0.46
ATRIP-206ENST00000635084 INTS5Q6P9B9 1019 aaKnown RBP12.19□□□□□ -0.46
ATRIP-206ENST00000635084 RPS6KA4O75676 772 aa12.18□□□□□ -0.46
ATRIP-206ENST00000635084 DIEXFQ68CQ4 756 aaKnown RBP12.18□□□□□ -0.46
ATRIP-206ENST00000635084 CCDC87Q9NVE4 849 aa12.18□□□□□ -0.46
ATRIP-206ENST00000635084 RTCBQ9Y3I0 505 aaKnown RBP12.18□□□□□ -0.46
ATRIP-206ENST00000635084 PTGER2P43116 358 aa12.17□□□□□ -0.46
ATRIP-206ENST00000635084 SGIP1Q9BQI5 828 aa12.17□□□□□ -0.46
ATRIP-206ENST00000635084 TEX13AQ9BXU3 409 aaPredicted RBP12.17□□□□□ -0.46
ATRIP-206ENST00000635084 BABAM1Q9NWV8 329 aa12.17□□□□□ -0.46
ATRIP-206ENST00000635084 SOS1Q07889 1333 aaPredicted RBP12.16□□□□□ -0.46
ATRIP-206ENST00000635084 CCER2I3L3R5 266 aa12.16□□□□□ -0.46
ATRIP-206ENST00000635084 STARD3NLO95772 234 aa12.16□□□□□ -0.46
ATRIP-206ENST00000635084 SNRPA1P09661 255 aaKnown RBP12.16□□□□□ -0.46
ATRIP-206ENST00000635084 EIF4A1P60842 406 aaKnown RBP12.16□□□□□ -0.46
ATRIP-206ENST00000635084 FAM9BQ8IZU0 186 aa12.16□□□□□ -0.46
ATRIP-206ENST00000635084 TSPYL4Q9UJ04 414 aa12.16□□□□□ -0.46
ATRIP-206ENST00000635084 ZBTB1Q9Y2K1 713 aa12.16□□□□□ -0.46
ATRIP-206ENST00000635084 PRAMEF22A3QJZ6 481 aa12.15□□□□□ -0.46
ATRIP-206ENST00000635084 TRAPPC3LQ5T215 181 aa12.15□□□□□ -0.46
ATRIP-206ENST00000635084 ARHGEF1Q92888 912 aaKnown RBP12.15□□□□□ -0.46
ATRIP-206ENST00000635084 SCN7AQ01118 1682 aa12.15□□□□□ -0.46
ATRIP-206ENST00000635084 SENP3-EIF4A1A0A087X0R7 540 aa12.14□□□□□ -0.47
ATRIP-206ENST00000635084 CHL1O00533 1208 aa12.14□□□□□ -0.47
ATRIP-206ENST00000635084 GIGYF1O75420 1035 aaPredicted RBP12.14□□□□□ -0.47
ATRIP-206ENST00000635084 CCDC27Q2M243 656 aa12.14□□□□□ -0.47
ATRIP-206ENST00000635084 MSL1Q68DK7 614 aa12.14□□□□□ -0.47
ATRIP-206ENST00000635084 USP16Q9Y5T5 823 aa12.14□□□□□ -0.47
ATRIP-206ENST00000635084 COL15A1P39059 1388 aa12.14□□□□□ -0.47
ATRIP-206ENST00000635084 BCORQ6W2J9 1755 aa12.13□□□□□ -0.47
ATRIP-206ENST00000635084 A1BGP04217 495 aa12.13□□□□□ -0.47
ATRIP-206ENST00000635084 ZNF853P0CG23 659 aa12.13□□□□□ -0.47
ATRIP-206ENST00000635084 CANXP27824 592 aaKnown RBP12.13□□□□□ -0.47
ATRIP-206ENST00000635084 CALD1Q05682 793 aaKnown RBP12.13□□□□□ -0.47
ATRIP-206ENST00000635084 CFAP44Q96MT7 982 aa12.13□□□□□ -0.47
ATRIP-206ENST00000635084 LAS1LQ9Y4W2 734 aaKnown RBP12.13□□□□□ -0.47
ATRIP-206ENST00000635084 POLD1P28340 1107 aa12.12□□□□□ -0.47
ATRIP-206ENST00000635084 RFC4P35249 363 aa12.12□□□□□ -0.47
ATRIP-206ENST00000635084 EIF5P55010 431 aaKnown RBP12.12□□□□□ -0.47
ATRIP-206ENST00000635084 WWC1Q8IX03 1113 aa12.12□□□□□ -0.47
ATRIP-206ENST00000635084 MIER1Q8N108 512 aa12.12□□□□□ -0.47
ATRIP-206ENST00000635084 IFT57Q9NWB7 429 aa12.12□□□□□ -0.47
ATRIP-206ENST00000635084 PPP1R1BQ9UD71 204 aaPredicted RBP12.12□□□□□ -0.47
ATRIP-206ENST00000635084 USP42Q9H9J4 1324 aaKnown RBP12.11□□□□□ -0.47
ATRIP-206ENST00000635084 GYS1P13807 737 aa12.11□□□□□ -0.47
ATRIP-206ENST00000635084 IL6STP40189 918 aaPredicted RBP12.11□□□□□ -0.47
ATRIP-206ENST00000635084 ARXQ96QS3 562 aa12.11□□□□□ -0.47
ATRIP-206ENST00000635084 SRP68Q9UHB9 627 aaKnown RBP12.11□□□□□ -0.47
ATRIP-206ENST00000635084 NBPF26B4DH59 902 aa12.1□□□□□ -0.47
ATRIP-206ENST00000635084 PIP4K2AP48426 406 aaPredicted RBP12.1□□□□□ -0.47
ATRIP-206ENST00000635084 GNAI1P63096 354 aa12.1□□□□□ -0.47
ATRIP-206ENST00000635084 NBPF10Q6P3W6 841 aaKnown RBP12.1□□□□□ -0.47
ATRIP-206ENST00000635084 NBPF15Q8N660 670 aa12.1□□□□□ -0.47
ATRIP-206ENST00000635084 MBIPQ9NS73 344 aa12.1□□□□□ -0.47
ATRIP-206ENST00000635084 A0A087WZG4 1122 aa12.09□□□□□ -0.47
ATRIP-206ENST00000635084 KRT24Q2M2I5 525 aa12.09□□□□□ -0.47
ATRIP-206ENST00000635084 NLGN1Q8N2Q7 840 aa12.09□□□□□ -0.47
ATRIP-206ENST00000635084 NGEFQ8N5V2 710 aa12.09□□□□□ -0.47
ATRIP-206ENST00000635084 NARFQ9UHQ1 456 aa12.09□□□□□ -0.47
ATRIP-206ENST00000635084 KIF13BQ9NQT8 1826 aa12.09□□□□□ -0.47
ATRIP-206ENST00000635084 IL16Q14005 1332 aa12.09□□□□□ -0.47
ATRIP-206ENST00000635084 ZPR1O75312 459 aa12.08□□□□□ -0.48
ATRIP-206ENST00000635084 FKBP8Q14318 412 aa12.08□□□□□ -0.48
ATRIP-206ENST00000635084 USPL1Q5W0Q7 1092 aa12.08□□□□□ -0.48
ATRIP-206ENST00000635084 ZNF330Q9Y3S2 320 aaPredicted RBP12.08□□□□□ -0.48
ATRIP-206ENST00000635084 SALL2Q9Y467 1007 aaPredicted RBP12.08□□□□□ -0.48
ATRIP-206ENST00000635084 AFDNP55196 1824 aaKnown RBP12.08□□□□□ -0.48
ATRIP-206ENST00000635084 ERBB4Q15303 1308 aa12.08□□□□□ -0.48
ATRIP-206ENST00000635084 MMP10P09238 476 aa12.07□□□□□ -0.48
ATRIP-206ENST00000635084 FHDC1Q9C0D6 1143 aaPredicted RBP12.07□□□□□ -0.48
ATRIP-206ENST00000635084 BCL2L12Q9HB09 334 aa12.07□□□□□ -0.48
ATRIP-206ENST00000635084 NRXN2Q9P2S2 1712 aa12.07□□□□□ -0.48
ATRIP-206ENST00000635084 NUP98P52948 1817 aa12.07□□□□□ -0.48
ATRIP-206ENST00000635084 HOXB7P09629 217 aa12.06□□□□□ -0.48
ATRIP-206ENST00000635084 NPM2Q86SE8 214 aaKnown RBP12.06□□□□□ -0.48
ATRIP-206ENST00000635084 DZIP3Q86Y13 1208 aaKnown RBP12.06□□□□□ -0.48
ATRIP-206ENST00000635084 WDR63Q8IWG1 891 aa12.06□□□□□ -0.48
ATRIP-206ENST00000635084 TSR2Q969E8 191 aaKnown RBP12.06□□□□□ -0.48
ATRIP-206ENST00000635084 TBC1D2BQ9UPU7 963 aa12.06□□□□□ -0.48
ATRIP-206ENST00000635084 ZNF521Q96K83 1311 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms