RNA–Protein interactions for RNA: ENST00000634343.1

SMARCA2-221, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 3

Gene SMARCA2, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-221ENST00000634343 ALG2Q9H553 416 aa10.09□□□□□ -0.79
SMARCA2-221ENST00000634343 AMPD1P23109 780 aa10.08□□□□□ -0.8
SMARCA2-221ENST00000634343 PHKA2P46019 1235 aa10.08□□□□□ -0.8
SMARCA2-221ENST00000634343 CFAP70Q5T0N1 1121 aa10.08□□□□□ -0.8
SMARCA2-221ENST00000634343 PPP1R12CQ9BZL4 782 aa10.08□□□□□ -0.8
SMARCA2-221ENST00000634343 RAB6BQ9NRW1 208 aa10.08□□□□□ -0.8
SMARCA2-221ENST00000634343 ATXN7L1Q9ULK2 861 aaPredicted RBP10.08□□□□□ -0.8
SMARCA2-221ENST00000634343 BMP4P12644 408 aa10.07□□□□□ -0.8
SMARCA2-221ENST00000634343 EFHC2Q5JST6 749 aa10.07□□□□□ -0.8
SMARCA2-221ENST00000634343 TMEM214Q6NUQ4 689 aaKnown RBP10.07□□□□□ -0.8
SMARCA2-221ENST00000634343 AEBP1Q8IUX7 1158 aa10.07□□□□□ -0.8
SMARCA2-221ENST00000634343 NCAPD3P42695 1498 aa10.06□□□□□ -0.8
SMARCA2-221ENST00000634343 IL2RAP01589 272 aa10.06□□□□□ -0.8
SMARCA2-221ENST00000634343 C1orf229Q6ZS94 237 aaPredicted RBP10.06□□□□□ -0.8
SMARCA2-221ENST00000634343 USTQ9Y2C2 406 aa10.06□□□□□ -0.8
SMARCA2-221ENST00000634343 THBS1P07996 1170 aa10.05□□□□□ -0.8
SMARCA2-221ENST00000634343 FURINP09958 794 aa10.05□□□□□ -0.8
SMARCA2-221ENST00000634343 COL8A1P27658 744 aa10.05□□□□□ -0.8
SMARCA2-221ENST00000634343 SRPK2P78362 688 aaKnown RBP10.05□□□□□ -0.8
SMARCA2-221ENST00000634343 GRIN2CQ14957 1233 aa10.05□□□□□ -0.8
SMARCA2-221ENST00000634343 ESCO1Q5FWF5 840 aa10.05□□□□□ -0.8
SMARCA2-221ENST00000634343 XAGE2Q96GT9 111 aa10.05□□□□□ -0.8
SMARCA2-221ENST00000634343 PATL2C9JE40 543 aaKnown RBP10.04□□□□□ -0.8
SMARCA2-221ENST00000634343 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.03□□□□□ -0.8
SMARCA2-221ENST00000634343 PALM3A6NDB9 673 aaPredicted RBP10.03□□□□□ -0.8
SMARCA2-221ENST00000634343 GNB5O14775 395 aa10.03□□□□□ -0.8
SMARCA2-221ENST00000634343 RFX1P22670 979 aa10.03□□□□□ -0.8
SMARCA2-221ENST00000634343 LINC00114Q6XXX2 140 aa10.03□□□□□ -0.8
SMARCA2-221ENST00000634343 SLCO4C1Q6ZQN7 724 aa10.03□□□□□ -0.8
SMARCA2-221ENST00000634343 Q8N3U1 123 aa10.03□□□□□ -0.8
SMARCA2-221ENST00000634343 RUBCNLQ9H714 662 aa10.03□□□□□ -0.8
SMARCA2-221ENST00000634343 FGFR3P22607 806 aa10.02□□□□□ -0.81
SMARCA2-221ENST00000634343 MSX1P28360 303 aa10.02□□□□□ -0.81
SMARCA2-221ENST00000634343 SEMA3FQ13275 785 aa10.02□□□□□ -0.81
SMARCA2-221ENST00000634343 C4orf17Q53FE4 359 aa10.02□□□□□ -0.81
SMARCA2-221ENST00000634343 NPM2Q86SE8 214 aaKnown RBP10.02□□□□□ -0.81
SMARCA2-221ENST00000634343 NOP53Q9NZM5 478 aaKnown RBP10.02□□□□□ -0.81
SMARCA2-221ENST00000634343 GGA1Q9UJY5 639 aa10.02□□□□□ -0.81
SMARCA2-221ENST00000634343 HRH3Q9Y5N1 445 aa10.02□□□□□ -0.81
SMARCA2-221ENST00000634343 EIF4G2P78344 907 aaKnown RBP eCLIP10.01□□□□□ -0.81
SMARCA2-221ENST00000634343 UBAP2LQ14157 1087 aaKnown RBP10.01□□□□□ -0.81
SMARCA2-221ENST00000634343 UCN2Q96RP3 112 aa10.01□□□□□ -0.81
SMARCA2-221ENST00000634343 ABHD17AQ96GS6 310 aa10□□□□□ -0.81
SMARCA2-221ENST00000634343 BTBD6Q96KE9 485 aa10□□□□□ -0.81
SMARCA2-221ENST00000634343 FHDC1Q9C0D6 1143 aaPredicted RBP10□□□□□ -0.81
SMARCA2-221ENST00000634343 C2CD2LO14523 706 aa9.99□□□□□ -0.81
SMARCA2-221ENST00000634343 LMOD1P29536 600 aaPredicted RBP9.99□□□□□ -0.81
SMARCA2-221ENST00000634343 FIGNL1Q6PIW4 674 aa9.99□□□□□ -0.81
SMARCA2-221ENST00000634343 RHBDD1Q8TEB9 315 aa9.99□□□□□ -0.81
SMARCA2-221ENST00000634343 CEP126Q9P2H0 1117 aa9.99□□□□□ -0.81
SMARCA2-221ENST00000634343 TFIP11Q9UBB9 837 aaKnown RBP9.99□□□□□ -0.81
SMARCA2-221ENST00000634343 C1QTNF9BB2RNN3 333 aa9.98□□□□□ -0.81
SMARCA2-221ENST00000634343 BNIP3LO60238 219 aa9.98□□□□□ -0.81
SMARCA2-221ENST00000634343 BRD1O95696 1058 aa9.98□□□□□ -0.81
SMARCA2-221ENST00000634343 ARAFP10398 606 aa9.98□□□□□ -0.81
SMARCA2-221ENST00000634343 EPXP11678 715 aa9.98□□□□□ -0.81
SMARCA2-221ENST00000634343 USP4Q13107 963 aa9.98□□□□□ -0.81
SMARCA2-221ENST00000634343 CRISPLD1Q9H336 500 aa9.98□□□□□ -0.81
SMARCA2-221ENST00000634343 SUV39H2Q9H5I1 410 aa9.98□□□□□ -0.81
SMARCA2-221ENST00000634343 HOXB4P17483 251 aaPredicted RBP9.97□□□□□ -0.81
SMARCA2-221ENST00000634343 CTBSQ01459 385 aa9.97□□□□□ -0.81
SMARCA2-221ENST00000634343 KCNA1Q09470 495 aa9.97□□□□□ -0.81
SMARCA2-221ENST00000634343 PPARGC1BQ86YN6 1023 aaKnown RBP9.97□□□□□ -0.81
SMARCA2-221ENST00000634343 NDFIP2Q9NV92 336 aa9.97□□□□□ -0.81
SMARCA2-221ENST00000634343 MAFBQ9Y5Q3 323 aaPredicted RBP9.97□□□□□ -0.81
SMARCA2-221ENST00000634343 ATG7O95352 703 aa9.96□□□□□ -0.82
SMARCA2-221ENST00000634343 CDCA7Q9BWT1 371 aaPredicted RBP9.96□□□□□ -0.82
SMARCA2-221ENST00000634343 TBC1D9Q6ZT07 1266 aa9.95□□□□□ -0.82
SMARCA2-221ENST00000634343 CD163Q86VB7 1156 aa9.95□□□□□ -0.82
SMARCA2-221ENST00000634343 RNF135Q8IUD6 432 aa9.95□□□□□ -0.82
SMARCA2-221ENST00000634343 CCDC85AQ96PX6 553 aaPredicted RBP9.95□□□□□ -0.82
SMARCA2-221ENST00000634343 PCDHGC4Q9Y5F7 938 aa9.95□□□□□ -0.82
SMARCA2-221ENST00000634343 ATP9BO43861 1147 aa9.94□□□□□ -0.82
SMARCA2-221ENST00000634343 TMCO4Q5TGY1 634 aa9.94□□□□□ -0.82
SMARCA2-221ENST00000634343 C1orf216Q8TAB5 229 aa9.94□□□□□ -0.82
SMARCA2-221ENST00000634343 SIRT1Q96EB6 747 aa9.94□□□□□ -0.82
SMARCA2-221ENST00000634343 NEURL1BA8MQ27 555 aa9.93□□□□□ -0.82
SMARCA2-221ENST00000634343 DGKGP49619 791 aa9.93□□□□□ -0.82
SMARCA2-221ENST00000634343 TLR1Q15399 786 aa9.93□□□□□ -0.82
SMARCA2-221ENST00000634343 NLRP8Q86W28 1048 aa9.93□□□□□ -0.82
SMARCA2-221ENST00000634343 NFATC2IPQ8NCF5 419 aa9.93□□□□□ -0.82
SMARCA2-221ENST00000634343 ZCCHC2Q9C0B9 1178 aaKnown RBP9.93□□□□□ -0.82
SMARCA2-221ENST00000634343 GZF1Q9H116 711 aaPredicted RBP9.93□□□□□ -0.82
SMARCA2-221ENST00000634343 PDS5BQ9NTI5 1447 aa9.92□□□□□ -0.82
SMARCA2-221ENST00000634343 DOLKQ9UPQ8 538 aa9.92□□□□□ -0.82
SMARCA2-221ENST00000634343 ADH6P28332 368 aa9.91□□□□□ -0.82
SMARCA2-221ENST00000634343 KRTAP4-8Q9BYQ9 185 aa9.91□□□□□ -0.82
SMARCA2-221ENST00000634343 CHSY3Q70JA7 882 aa9.9□□□□□ -0.82
SMARCA2-221ENST00000634343 NIFKQ9BYG3 293 aaKnown RBP9.9□□□□□ -0.82
SMARCA2-221ENST00000634343 ETNK1Q9HBU6 452 aa9.9□□□□□ -0.82
SMARCA2-221ENST00000634343 AVENQ9NQS1 362 aaPredicted RBP9.9□□□□□ -0.82
SMARCA2-221ENST00000634343 ATAD2BQ9ULI0 1458 aa9.9□□□□□ -0.83
SMARCA2-221ENST00000634343 SMARCA2P51531 1590 aa9.89□□□□□ -0.83
SMARCA2-221ENST00000634343 ATXN7O15265 892 aaPredicted RBP9.89□□□□□ -0.83
SMARCA2-221ENST00000634343 CHRNA4P43681 627 aa9.89□□□□□ -0.83
SMARCA2-221ENST00000634343 PLA2G4AP47712 749 aa9.89□□□□□ -0.83
SMARCA2-221ENST00000634343 SLFNL1Q499Z3 407 aa9.89□□□□□ -0.83
SMARCA2-221ENST00000634343 HMGXB3Q12766 1538 aa9.88□□□□□ -0.83
SMARCA2-221ENST00000634343 ELOAQ14241 798 aaKnown RBP9.88□□□□□ -0.83
SMARCA2-221ENST00000634343 FAM182BQ5T319 152 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms