RNA–Protein interactions for RNA: ENST00000633899.1

SF1-221, Transcript of splicing factor 1, humanhuman

TSL 4

Gene SF1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-221ENST00000633899 INTS5Q6P9B9 1019 aaKnown RBP27.45■■□□□ 1.98
SF1-221ENST00000633899 THUMPD2Q9BTF0 503 aaKnown RBP27.45■■□□□ 1.98
SF1-221ENST00000633899 RRP7AQ9Y3A4 280 aaKnown RBP27.44■■□□□ 1.98
SF1-221ENST00000633899 KDM3BQ7LBC6 1761 aa27.43■■□□□ 1.98
SF1-221ENST00000633899 DCAF8L1A6NGE4 600 aa27.42■■□□□ 1.98
SF1-221ENST00000633899 ZBTB1Q9Y2K1 713 aa27.42■■□□□ 1.98
SF1-221ENST00000633899 SYT17Q9BSW7 474 aa27.41■■□□□ 1.98
SF1-221ENST00000633899 MRS2Q9HD23 443 aa27.41■■□□□ 1.98
SF1-221ENST00000633899 MIS18AQ9NYP9 233 aa27.41■■□□□ 1.98
SF1-221ENST00000633899 SOS1Q07889 1333 aaPredicted RBP27.41■■□□□ 1.98
SF1-221ENST00000633899 CANXP27824 592 aaKnown RBP27.4■■□□□ 1.98
SF1-221ENST00000633899 NLGN1Q8N2Q7 840 aa27.4■■□□□ 1.98
SF1-221ENST00000633899 SNRPA1P09661 255 aaKnown RBP27.39■■□□□ 1.98
SF1-221ENST00000633899 CCDC184Q52MB2 194 aa27.39■■□□□ 1.98
SF1-221ENST00000633899 COL15A1P39059 1388 aa27.38■■□□□ 1.97
SF1-221ENST00000633899 ZPR1O75312 459 aa27.38■■□□□ 1.97
SF1-221ENST00000633899 NPM2Q86SE8 214 aaKnown RBP27.38■■□□□ 1.97
SF1-221ENST00000633899 USP42Q9H9J4 1324 aaKnown RBP27.37■■□□□ 1.97
SF1-221ENST00000633899 LAMB4A4D0S4 1761 aa27.36■■□□□ 1.97
SF1-221ENST00000633899 GYS1P13807 737 aa27.36■■□□□ 1.97
SF1-221ENST00000633899 TSPYL4Q9UJ04 414 aa27.36■■□□□ 1.97
SF1-221ENST00000633899 ZNF330Q9Y3S2 320 aaPredicted RBP27.36■■□□□ 1.97
SF1-221ENST00000633899 SRP68Q9UHB9 627 aaKnown RBP27.35■■□□□ 1.97
SF1-221ENST00000633899 A0A087WZG4 1122 aa27.34■■□□□ 1.97
SF1-221ENST00000633899 MMP10P09238 476 aa27.34■■□□□ 1.97
SF1-221ENST00000633899 USP16Q9Y5T5 823 aa27.33■■□□□ 1.97
SF1-221ENST00000633899 PRAMEF22A3QJZ6 481 aa27.32■■□□□ 1.96
SF1-221ENST00000633899 APAF1O14727 1248 aa27.32■■□□□ 1.96
SF1-221ENST00000633899 A1BGP04217 495 aa27.32■■□□□ 1.96
SF1-221ENST00000633899 NARFQ9UHQ1 456 aa27.32■■□□□ 1.96
SF1-221ENST00000633899 IL6STP40189 918 aaPredicted RBP27.31■■□□□ 1.96
SF1-221ENST00000633899 USPL1Q5W0Q7 1092 aa27.31■■□□□ 1.96
SF1-221ENST00000633899 BABAM1Q9NWV8 329 aa27.31■■□□□ 1.96
SF1-221ENST00000633899 TRIM35Q9UPQ4 493 aa27.31■■□□□ 1.96
SF1-221ENST00000633899 EIF5P55010 431 aaKnown RBP27.3■■□□□ 1.96
SF1-221ENST00000633899 EIF4A1P60842 406 aaKnown RBP27.3■■□□□ 1.96
SF1-221ENST00000633899 CD2APQ9Y5K6 639 aa27.3■■□□□ 1.96
SF1-221ENST00000633899 PARP3Q9Y6F1 533 aa27.3■■□□□ 1.96
SF1-221ENST00000633899 FKBP8Q14318 412 aa27.29■■□□□ 1.96
SF1-221ENST00000633899 LAS1LQ9Y4W2 734 aaKnown RBP27.29■■□□□ 1.96
SF1-221ENST00000633899 NLGN2Q8NFZ4 835 aa27.27■■□□□ 1.96
SF1-221ENST00000633899 GIGYF1O75420 1035 aaPredicted RBP27.26■■□□□ 1.95
SF1-221ENST00000633899 SCN7AQ01118 1682 aa27.26■■□□□ 1.95
SF1-221ENST00000633899 PIP4K2AP48426 406 aaPredicted RBP27.25■■□□□ 1.95
SF1-221ENST00000633899 CALD1Q05682 793 aaKnown RBP27.24■■□□□ 1.95
SF1-221ENST00000633899 PELP1Q8IZL8 1130 aaKnown RBP27.24■■□□□ 1.95
SF1-221ENST00000633899 TBC1D2BQ9UPU7 963 aa27.24■■□□□ 1.95
SF1-221ENST00000633899 GPR162Q16538 588 aa27.22■■□□□ 1.95
SF1-221ENST00000633899 DZIP3Q86Y13 1208 aaKnown RBP27.22■■□□□ 1.95
SF1-221ENST00000633899 KIF13BQ9NQT8 1826 aa27.22■■□□□ 1.95
SF1-221ENST00000633899 BCORQ6W2J9 1755 aa27.22■■□□□ 1.95
SF1-221ENST00000633899 CHL1O00533 1208 aa27.2■■□□□ 1.94
SF1-221ENST00000633899 BCL2L12Q9HB09 334 aa27.2■■□□□ 1.94
SF1-221ENST00000633899 DDR1Q08345 913 aa27.19■■□□□ 1.94
SF1-221ENST00000633899 CFAP44Q96MT7 982 aa27.19■■□□□ 1.94
SF1-221ENST00000633899 AFDNP55196 1824 aaKnown RBP27.18■■□□□ 1.94
SF1-221ENST00000633899 C10orf71Q711Q0 1435 aa27.18■■□□□ 1.94
SF1-221ENST00000633899 NBPF26B4DH59 902 aa27.18■■□□□ 1.94
SF1-221ENST00000633899 TM4SF1P30408 202 aa27.18■■□□□ 1.94
SF1-221ENST00000633899 NFIXQ14938 502 aa27.18■■□□□ 1.94
SF1-221ENST00000633899 NBPF10Q6P3W6 841 aaKnown RBP27.18■■□□□ 1.94
SF1-221ENST00000633899 BICDL1Q6ZP65 573 aa27.18■■□□□ 1.94
SF1-221ENST00000633899 FAM9BQ8IZU0 186 aa27.18■■□□□ 1.94
SF1-221ENST00000633899 NBPF15Q8N660 670 aa27.18■■□□□ 1.94
SF1-221ENST00000633899 POLRMTO00411 1230 aaKnown RBP27.17■■□□□ 1.94
SF1-221ENST00000633899 EIF2S2P20042 333 aaKnown RBP27.17■■□□□ 1.94
SF1-221ENST00000633899 GNAI1P63096 354 aa27.16■■□□□ 1.94
SF1-221ENST00000633899 IFT57Q9NWB7 429 aa27.16■■□□□ 1.94
SF1-221ENST00000633899 ZNF652Q9Y2D9 606 aa27.16■■□□□ 1.94
SF1-221ENST00000633899 N4BP2Q86UW6 1770 aaPredicted RBP27.16■■□□□ 1.94
SF1-221ENST00000633899 ERBB4Q15303 1308 aa27.16■■□□□ 1.94
SF1-221ENST00000633899 SENP3-EIF4A1A0A087X0R7 540 aa27.15■■□□□ 1.94
SF1-221ENST00000633899 CAMTA2O94983 1202 aa27.15■■□□□ 1.94
SF1-221ENST00000633899 MYL6BP14649 208 aa27.15■■□□□ 1.94
SF1-221ENST00000633899 NGEFQ8N5V2 710 aa27.15■■□□□ 1.94
SF1-221ENST00000633899 TGFB2P61812 414 aa27.13■■□□□ 1.93
SF1-221ENST00000633899 TBC1D9BQ66K14 1250 aa27.13■■□□□ 1.93
SF1-221ENST00000633899 MBIPQ9NS73 344 aa27.13■■□□□ 1.93
SF1-221ENST00000633899 SERPINB2P05120 415 aa27.12■■□□□ 1.93
SF1-221ENST00000633899 KIF6Q6ZMV9 814 aa27.12■■□□□ 1.93
SF1-221ENST00000633899 NRXN2Q9P2S2 1712 aa27.12■■□□□ 1.93
SF1-221ENST00000633899 CARMIL3Q8ND23 1372 aa27.11■■□□□ 1.93
SF1-221ENST00000633899 KIAA1551Q9HCM1 1747 aa27.11■■□□□ 1.93
SF1-221ENST00000633899 CCDC27Q2M243 656 aa27.11■■□□□ 1.93
SF1-221ENST00000633899 SETDB2Q96T68 719 aa27.11■■□□□ 1.93
SF1-221ENST00000633899 CHD4Q14839 1912 aa27.11■■□□□ 1.93
SF1-221ENST00000633899 PXDNLA1KZ92 1463 aa27.11■■□□□ 1.93
SF1-221ENST00000633899 NPHP1O15259 732 aa27.1■■□□□ 1.93
SF1-221ENST00000633899 KRT24Q2M2I5 525 aa27.1■■□□□ 1.93
SF1-221ENST00000633899 CLEC4GQ6UXB4 293 aa27.1■■□□□ 1.93
SF1-221ENST00000633899 NECTIN2Q92692 538 aa27.1■■□□□ 1.93
SF1-221ENST00000633899 ZNF853P0CG23 659 aa27.09■■□□□ 1.93
SF1-221ENST00000633899 WWC3Q9ULE0 1092 aa27.09■■□□□ 1.93
SF1-221ENST00000633899 GRIN3BO60391 1043 aa27.08■■□□□ 1.93
SF1-221ENST00000633899 HOXB7P09629 217 aa27.08■■□□□ 1.93
SF1-221ENST00000633899 NCBP3Q53F19 620 aaKnown RBP27.08■■□□□ 1.93
SF1-221ENST00000633899 WWC1Q8IX03 1113 aa27.08■■□□□ 1.93
SF1-221ENST00000633899 SALL2Q9Y467 1007 aaPredicted RBP27.08■■□□□ 1.93
SF1-221ENST00000633899 NUP98P52948 1817 aa27.08■■□□□ 1.93
SF1-221ENST00000633899 A0A0G2JLW4 131 aa27.07■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms