RNA–Protein interactions for RNA: ENST00000633552.1

GPCPD1-207, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 5

Gene GPCPD1, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-207ENST00000633552 NGLY1Q96IV0 654 aa7.88□□□□□ -1.15
GPCPD1-207ENST00000633552 PODXL2Q9NZ53 605 aa7.88□□□□□ -1.15
GPCPD1-207ENST00000633552 USP3Q9Y6I4 520 aa7.88□□□□□ -1.15
GPCPD1-207ENST00000633552 CDK2AP1O14519 115 aa7.87□□□□□ -1.15
GPCPD1-207ENST00000633552 SNRPBP14678 240 aaKnown RBP7.87□□□□□ -1.15
GPCPD1-207ENST00000633552 ARID4AP29374 1257 aaPredicted RBP7.87□□□□□ -1.15
GPCPD1-207ENST00000633552 PLA2G4AP47712 749 aa7.87□□□□□ -1.15
GPCPD1-207ENST00000633552 MTFR1Q15390 333 aa7.87□□□□□ -1.15
GPCPD1-207ENST00000633552 PHLDB3Q6NSJ2 640 aa7.87□□□□□ -1.15
GPCPD1-207ENST00000633552 PRICKLE2Q7Z3G6 844 aa7.87□□□□□ -1.15
GPCPD1-207ENST00000633552 RHBDD1Q8TEB9 315 aa7.87□□□□□ -1.15
GPCPD1-207ENST00000633552 FHDC1Q9C0D6 1143 aaPredicted RBP7.87□□□□□ -1.15
GPCPD1-207ENST00000633552 GZF1Q9H116 711 aaPredicted RBP7.87□□□□□ -1.15
GPCPD1-207ENST00000633552 PARP3Q9Y6F1 533 aa7.87□□□□□ -1.15
GPCPD1-207ENST00000633552 SERTM1A2A2V5 107 aa7.86□□□□□ -1.15
GPCPD1-207ENST00000633552 FIGNL2A6NMB9 653 aa7.86□□□□□ -1.15
GPCPD1-207ENST00000633552 TTLL8A6PVC2 850 aa7.86□□□□□ -1.15
GPCPD1-207ENST00000633552 GPC1P35052 558 aa7.86□□□□□ -1.15
GPCPD1-207ENST00000633552 PHKA2P46019 1235 aa7.86□□□□□ -1.15
GPCPD1-207ENST00000633552 FOXK2Q01167 660 aa7.86□□□□□ -1.15
GPCPD1-207ENST00000633552 NAA30Q147X3 362 aaPredicted RBP7.86□□□□□ -1.15
GPCPD1-207ENST00000633552 FOXD4L5Q5VV16 416 aaPredicted RBP7.86□□□□□ -1.15
GPCPD1-207ENST00000633552 AIDAQ96BJ3 306 aa7.86□□□□□ -1.15
GPCPD1-207ENST00000633552 ZFP42Q96MM3 310 aa7.86□□□□□ -1.15
GPCPD1-207ENST00000633552 NIFKQ9BYG3 293 aaKnown RBP7.86□□□□□ -1.15
GPCPD1-207ENST00000633552 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.86□□□□□ -1.15
GPCPD1-207ENST00000633552 LOC100996750A0A140TA64 210 aa7.85□□□□□ -1.15
GPCPD1-207ENST00000633552 C21orf2O43822 256 aa7.85□□□□□ -1.15
GPCPD1-207ENST00000633552 PTCD1O75127 700 aaKnown RBP7.85□□□□□ -1.15
GPCPD1-207ENST00000633552 SERPINB4P48594 390 aa7.85□□□□□ -1.15
GPCPD1-207ENST00000633552 RNF144AP50876 292 aaPredicted RBP7.85□□□□□ -1.15
GPCPD1-207ENST00000633552 TRIM46Q7Z4K8 759 aa7.85□□□□□ -1.15
GPCPD1-207ENST00000633552 RNF217Q8TC41 542 aa7.85□□□□□ -1.15
GPCPD1-207ENST00000633552 KRTAP4-6Q9BYQ5 205 aa7.85□□□□□ -1.15
GPCPD1-207ENST00000633552 HRH3Q9Y5N1 445 aa7.85□□□□□ -1.15
GPCPD1-207ENST00000633552 ZNF211Q13398 564 aaPredicted RBP7.84□□□□□ -1.15
GPCPD1-207ENST00000633552 TAS1R3Q7RTX0 852 aa7.84□□□□□ -1.15
GPCPD1-207ENST00000633552 LYSMD3Q7Z3D4 306 aa7.84□□□□□ -1.15
GPCPD1-207ENST00000633552 PPARGC1BQ86YN6 1023 aaKnown RBP7.84□□□□□ -1.15
GPCPD1-207ENST00000633552 C1orf216Q8TAB5 229 aa7.84□□□□□ -1.15
GPCPD1-207ENST00000633552 ANO2Q9NQ90 1003 aa7.84□□□□□ -1.15
GPCPD1-207ENST00000633552 SEPT3Q9UH03 358 aa7.84□□□□□ -1.15
GPCPD1-207ENST00000633552 IQSEC3Q9UPP2 1182 aaPredicted RBP7.84□□□□□ -1.15
GPCPD1-207ENST00000633552 MAN1A2O60476 641 aa7.83□□□□□ -1.16
GPCPD1-207ENST00000633552 RHOQP17081 205 aa7.83□□□□□ -1.16
GPCPD1-207ENST00000633552 NOS2P35228 1153 aa7.83□□□□□ -1.16
GPCPD1-207ENST00000633552 NBPF1Q3BBV0 1214 aa7.83□□□□□ -1.16
GPCPD1-207ENST00000633552 C4orf17Q53FE4 359 aa7.83□□□□□ -1.16
GPCPD1-207ENST00000633552 LCE2CQ5TA81 110 aa7.83□□□□□ -1.16
GPCPD1-207ENST00000633552 L3MBTL2Q969R5 705 aa7.83□□□□□ -1.16
GPCPD1-207ENST00000633552 GRIP2Q9C0E4 1043 aa7.83□□□□□ -1.16
GPCPD1-207ENST00000633552 HCN4Q9Y3Q4 1203 aa7.83□□□□□ -1.16
GPCPD1-207ENST00000633552 H3BRB1 525 aa7.82□□□□□ -1.16
GPCPD1-207ENST00000633552 POU4F2Q12837 409 aa7.82□□□□□ -1.16
GPCPD1-207ENST00000633552 SH3PXD2AQ5TCZ1 1133 aa7.82□□□□□ -1.16
GPCPD1-207ENST00000633552 CAPN12Q6ZSI9 719 aa7.82□□□□□ -1.16
GPCPD1-207ENST00000633552 GTF3C2Q8WUA4 911 aaPredicted RBP7.82□□□□□ -1.16
GPCPD1-207ENST00000633552 C2orf49Q9BVC5 232 aaPredicted RBP7.82□□□□□ -1.16
GPCPD1-207ENST00000633552 TUT1Q9H6E5 874 aaKnown RBP7.82□□□□□ -1.16
GPCPD1-207ENST00000633552 BIN2Q9UBW5 565 aaPredicted RBP7.82□□□□□ -1.16
GPCPD1-207ENST00000633552 EML1O00423 815 aa7.81□□□□□ -1.16
GPCPD1-207ENST00000633552 TEAD4Q15561 434 aa7.81□□□□□ -1.16
GPCPD1-207ENST00000633552 TMCO4Q5TGY1 634 aa7.81□□□□□ -1.16
GPCPD1-207ENST00000633552 TXNDC2Q86VQ3 553 aa7.81□□□□□ -1.16
GPCPD1-207ENST00000633552 ZDHHC1Q8WTX9 485 aa7.81□□□□□ -1.16
GPCPD1-207ENST00000633552 GNEQ9Y223 722 aaKnown RBP7.81□□□□□ -1.16
GPCPD1-207ENST00000633552 SOS2Q07890 1332 aaPredicted RBP7.8□□□□□ -1.16
GPCPD1-207ENST00000633552 TATP17735 454 aaPredicted RBP7.8□□□□□ -1.16
GPCPD1-207ENST00000633552 MTMR3Q13615 1198 aa7.8□□□□□ -1.16
GPCPD1-207ENST00000633552 C16orf46Q6P387 395 aa7.8□□□□□ -1.16
GPCPD1-207ENST00000633552 NBPF10Q6P3W6 841 aaKnown RBP7.8□□□□□ -1.16
GPCPD1-207ENST00000633552 BICDL1Q6ZP65 573 aa7.8□□□□□ -1.16
GPCPD1-207ENST00000633552 GLYCTKQ8IVS8 523 aa7.8□□□□□ -1.16
GPCPD1-207ENST00000633552 NPAS3Q8IXF0 933 aa7.8□□□□□ -1.16
GPCPD1-207ENST00000633552 STAG2Q8N3U4 1231 aa7.8□□□□□ -1.16
GPCPD1-207ENST00000633552 RHPN1Q8TCX5 695 aa7.8□□□□□ -1.16
GPCPD1-207ENST00000633552 IRF7Q92985 503 aa7.8□□□□□ -1.16
GPCPD1-207ENST00000633552 PHACTR1Q9C0D0 580 aa7.8□□□□□ -1.16
GPCPD1-207ENST00000633552 TIMMDC1Q9NPL8 285 aa7.8□□□□□ -1.16
GPCPD1-207ENST00000633552 NXF1Q9UBU9 619 aaKnown RBP7.8□□□□□ -1.16
GPCPD1-207ENST00000633552 TXLNAP40222 546 aa7.79□□□□□ -1.16
GPCPD1-207ENST00000633552 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.79□□□□□ -1.16
GPCPD1-207ENST00000633552 ALDH16A1Q8IZ83 802 aa7.79□□□□□ -1.16
GPCPD1-207ENST00000633552 ZSCAN1Q8NBB4 408 aa7.79□□□□□ -1.16
GPCPD1-207ENST00000633552 COL26A1Q96A83 441 aa7.79□□□□□ -1.16
GPCPD1-207ENST00000633552 DNMT3LQ9UJW3 386 aa7.79□□□□□ -1.16
GPCPD1-207ENST00000633552 SOBPA7XYQ1 873 aa7.78□□□□□ -1.16
GPCPD1-207ENST00000633552 SPATA31C2B4DYI2 1134 aa7.78□□□□□ -1.16
GPCPD1-207ENST00000633552 ARSJQ5FYB0 599 aaPredicted RBP7.78□□□□□ -1.16
GPCPD1-207ENST00000633552 GAS2L1Q99501 681 aaPredicted RBP7.78□□□□□ -1.16
GPCPD1-207ENST00000633552 GPAMQ9HCL2 828 aa7.78□□□□□ -1.16
GPCPD1-207ENST00000633552 NEUROD4Q9HD90 331 aa7.78□□□□□ -1.16
GPCPD1-207ENST00000633552 DNMT3AQ9Y6K1 912 aaPredicted RBP7.78□□□□□ -1.16
GPCPD1-207ENST00000633552 DGKZQ13574 1117 aa7.77□□□□□ -1.17
GPCPD1-207ENST00000633552 AAMPQ13685 434 aa7.77□□□□□ -1.17
GPCPD1-207ENST00000633552 SND1Q7KZF4 910 aaKnown RBP eCLIP7.77□□□□□ -1.17
GPCPD1-207ENST00000633552 HELQQ8TDG4 1101 aa7.77□□□□□ -1.17
GPCPD1-207ENST00000633552 SAP130Q9H0E3 1048 aa7.77□□□□□ -1.17
GPCPD1-207ENST00000633552 QTRT2Q9H974 415 aaKnown RBP7.77□□□□□ -1.17
GPCPD1-207ENST00000633552 GJA3Q9Y6H8 435 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms