RNA–Protein interactions for RNA: ENST00000629045.1

SCARNA4-201, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 128 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-201ENST00000629045 CDK2AP1O14519 115 aa4.92□□□□□ -1.62
SCARNA4-201ENST00000629045 THBS1P07996 1170 aa4.92□□□□□ -1.62
SCARNA4-201ENST00000629045 VSIG8P0DPA2 414 aa4.92□□□□□ -1.62
SCARNA4-201ENST00000629045 SRPK2P78362 688 aaKnown RBP4.92□□□□□ -1.62
SCARNA4-201ENST00000629045 WDR44Q5JSH3 913 aa4.92□□□□□ -1.62
SCARNA4-201ENST00000629045 STK32AQ8WU08 396 aa4.92□□□□□ -1.62
SCARNA4-201ENST00000629045 AIDAQ96BJ3 306 aa4.92□□□□□ -1.62
SCARNA4-201ENST00000629045 ARID3AQ99856 593 aa4.92□□□□□ -1.62
SCARNA4-201ENST00000629045 NIFKQ9BYG3 293 aaKnown RBP4.92□□□□□ -1.62
SCARNA4-201ENST00000629045 CABP1Q9NZU7 370 aa4.92□□□□□ -1.62
SCARNA4-201ENST00000629045 NOVA2Q9UNW9 492 aaKnown RBP4.92□□□□□ -1.62
SCARNA4-201ENST00000629045 GPR25O00155 361 aa4.91□□□□□ -1.62
SCARNA4-201ENST00000629045 C21orf2O43822 256 aa4.91□□□□□ -1.62
SCARNA4-201ENST00000629045 MSX1P28360 303 aa4.91□□□□□ -1.62
SCARNA4-201ENST00000629045 TXLNAP40222 546 aa4.91□□□□□ -1.62
SCARNA4-201ENST00000629045 KRT76Q01546 638 aa4.91□□□□□ -1.62
SCARNA4-201ENST00000629045 DBN1Q16643 649 aa4.91□□□□□ -1.62
SCARNA4-201ENST00000629045 PBXIP1Q96AQ6 731 aa4.91□□□□□ -1.62
SCARNA4-201ENST00000629045 M0R2N6 131 aa4.9□□□□□ -1.63
SCARNA4-201ENST00000629045 EML1O00423 815 aa4.9□□□□□ -1.63
SCARNA4-201ENST00000629045 F11P03951 625 aa4.9□□□□□ -1.63
SCARNA4-201ENST00000629045 RNFT1Q5M7Z0 435 aa4.9□□□□□ -1.63
SCARNA4-201ENST00000629045 TRIM22Q8IYM9 498 aa4.9□□□□□ -1.63
SCARNA4-201ENST00000629045 L3MBTL2Q969R5 705 aa4.9□□□□□ -1.63
SCARNA4-201ENST00000629045 GTPBP3Q969Y2 492 aaKnown RBP4.9□□□□□ -1.63
SCARNA4-201ENST00000629045 KLRG1Q96E93 195 aa4.9□□□□□ -1.63
SCARNA4-201ENST00000629045 HINFPQ9BQA5 517 aa4.9□□□□□ -1.63
SCARNA4-201ENST00000629045 NUCKS1Q9H1E3 243 aaKnown RBP4.9□□□□□ -1.63
SCARNA4-201ENST00000629045 ZNF232Q9UNY5 417 aa4.9□□□□□ -1.63
SCARNA4-201ENST00000629045 PPP1R12BO60237 982 aaPredicted RBP4.89□□□□□ -1.63
SCARNA4-201ENST00000629045 NBPF1Q3BBV0 1214 aa4.89□□□□□ -1.63
SCARNA4-201ENST00000629045 SV2AQ7L0J3 742 aa4.89□□□□□ -1.63
SCARNA4-201ENST00000629045 FAM200AQ8TCP9 573 aa4.89□□□□□ -1.63
SCARNA4-201ENST00000629045 CHMP7Q8WUX9 453 aaPredicted RBP4.89□□□□□ -1.63
SCARNA4-201ENST00000629045 SCG3Q8WXD2 468 aaKnown RBP4.89□□□□□ -1.63
SCARNA4-201ENST00000629045 NANOS1Q8WY41 292 aaKnown RBP4.89□□□□□ -1.63
SCARNA4-201ENST00000629045 COL25A1Q9BXS0 654 aaPredicted RBP4.89□□□□□ -1.63
SCARNA4-201ENST00000629045 SERTM1A2A2V5 107 aa4.88□□□□□ -1.63
SCARNA4-201ENST00000629045 WIPF1O43516 503 aa4.88□□□□□ -1.63
SCARNA4-201ENST00000629045 ATG7O95352 703 aa4.88□□□□□ -1.63
SCARNA4-201ENST00000629045 CSB-PGBD3P0DP91 1061 aa4.88□□□□□ -1.63
SCARNA4-201ENST00000629045 NOS2P35228 1153 aa4.88□□□□□ -1.63
SCARNA4-201ENST00000629045 PSMA6P60900 246 aaKnown RBP4.88□□□□□ -1.63
SCARNA4-201ENST00000629045 GAS6Q14393 721 aa4.88□□□□□ -1.63
SCARNA4-201ENST00000629045 TEAD4Q15561 434 aa4.88□□□□□ -1.63
SCARNA4-201ENST00000629045 ARSJQ5FYB0 599 aaPredicted RBP4.88□□□□□ -1.63
SCARNA4-201ENST00000629045 TMEM164Q5U3C3 297 aa4.88□□□□□ -1.63
SCARNA4-201ENST00000629045 ERICH6Q7L0X2 663 aa4.88□□□□□ -1.63
SCARNA4-201ENST00000629045 PGBD3Q8N328 593 aa4.88□□□□□ -1.63
SCARNA4-201ENST00000629045 CNTNAP3BQ96NU0 1288 aa4.88□□□□□ -1.63
SCARNA4-201ENST00000629045 CNTNAP3Q9BZ76 1288 aa4.88□□□□□ -1.63
SCARNA4-201ENST00000629045 H7C1W4 665 aa4.87□□□□□ -1.63
SCARNA4-201ENST00000629045 PRMT3O60678 531 aa4.87□□□□□ -1.63
SCARNA4-201ENST00000629045 TATP17735 454 aaPredicted RBP4.87□□□□□ -1.63
SCARNA4-201ENST00000629045 UBAP2LQ14157 1087 aaKnown RBP4.87□□□□□ -1.63
SCARNA4-201ENST00000629045 NGLY1Q96IV0 654 aa4.87□□□□□ -1.63
SCARNA4-201ENST00000629045 PRIMPOLQ96LW4 560 aa4.87□□□□□ -1.63
SCARNA4-201ENST00000629045 CRISPLD1Q9H336 500 aa4.87□□□□□ -1.63
SCARNA4-201ENST00000629045 ZDHHC3Q9NYG2 299 aa4.87□□□□□ -1.63
SCARNA4-201ENST00000629045 HCN4Q9Y3Q4 1203 aa4.87□□□□□ -1.63
SCARNA4-201ENST00000629045 ATAD2Q6PL18 1390 aa4.87□□□□□ -1.63
SCARNA4-201ENST00000629045 A0A1W2PNR3 127 aa4.86□□□□□ -1.63
SCARNA4-201ENST00000629045 DCDC2BA2VCK2 349 aa4.86□□□□□ -1.63
SCARNA4-201ENST00000629045 FAM69CQ0P6D2 419 aa4.86□□□□□ -1.63
SCARNA4-201ENST00000629045 ELOAQ14241 798 aaKnown RBP4.86□□□□□ -1.63
SCARNA4-201ENST00000629045 EFHC2Q5JST6 749 aa4.86□□□□□ -1.63
SCARNA4-201ENST00000629045 BICDL1Q6ZP65 573 aa4.86□□□□□ -1.63
SCARNA4-201ENST00000629045 C1orf216Q8TAB5 229 aa4.86□□□□□ -1.63
SCARNA4-201ENST00000629045 ABHD17AQ96GS6 310 aa4.86□□□□□ -1.63
SCARNA4-201ENST00000629045 HSH2DQ96JZ2 352 aa4.86□□□□□ -1.63
SCARNA4-201ENST00000629045 ZIC5Q96T25 663 aa4.86□□□□□ -1.63
SCARNA4-201ENST00000629045 PHACTR1Q9C0D0 580 aa4.86□□□□□ -1.63
SCARNA4-201ENST00000629045 ACIN1Q9UKV3 1341 aaKnown RBP4.86□□□□□ -1.63
SCARNA4-201ENST00000629045 CARNS1A5YM72 827 aa4.85□□□□□ -1.63
SCARNA4-201ENST00000629045 IGFBP4P22692 258 aa4.85□□□□□ -1.63
SCARNA4-201ENST00000629045 WEE1P30291 646 aa4.85□□□□□ -1.63
SCARNA4-201ENST00000629045 POTEAQ6S8J7 498 aa4.85□□□□□ -1.63
SCARNA4-201ENST00000629045 LRRC69Q6ZNQ3 347 aa4.85□□□□□ -1.63
SCARNA4-201ENST00000629045 RHPN1Q8TCX5 695 aa4.85□□□□□ -1.63
SCARNA4-201ENST00000629045 GMCL1Q96IK5 515 aa4.85□□□□□ -1.63
SCARNA4-201ENST00000629045 C2orf49Q9BVC5 232 aaPredicted RBP4.85□□□□□ -1.63
SCARNA4-201ENST00000629045 SLAIN2Q9P270 581 aa4.85□□□□□ -1.63
SCARNA4-201ENST00000629045 HCN2Q9UL51 889 aa4.85□□□□□ -1.63
SCARNA4-201ENST00000629045 CHMP3Q9Y3E7 222 aa4.85□□□□□ -1.63
SCARNA4-201ENST00000629045 BNIP3LO60238 219 aa4.84□□□□□ -1.63
SCARNA4-201ENST00000629045 LORP23490 312 aaPredicted RBP4.84□□□□□ -1.63
SCARNA4-201ENST00000629045 HIRAP54198 1017 aaPredicted RBP4.84□□□□□ -1.63
SCARNA4-201ENST00000629045 FKBP5Q13451 457 aaPredicted RBP4.84□□□□□ -1.63
SCARNA4-201ENST00000629045 OCLNQ16625 522 aa4.84□□□□□ -1.63
SCARNA4-201ENST00000629045 SWI5Q1ZZU3 235 aa4.84□□□□□ -1.63
SCARNA4-201ENST00000629045 ALDH16A1Q8IZ83 802 aa4.84□□□□□ -1.63
SCARNA4-201ENST00000629045 ZNF280CQ8ND82 737 aa4.84□□□□□ -1.63
SCARNA4-201ENST00000629045 TRERF1Q96PN7 1200 aa4.84□□□□□ -1.63
SCARNA4-201ENST00000629045 MKNK1Q9BUB5 465 aa4.84□□□□□ -1.63
SCARNA4-201ENST00000629045 ZCCHC2Q9C0B9 1178 aaKnown RBP4.84□□□□□ -1.63
SCARNA4-201ENST00000629045 GJA3Q9Y6H8 435 aa4.84□□□□□ -1.63
SCARNA4-201ENST00000629045 LBRQ14739 615 aaKnown RBP4.83□□□□□ -1.64
SCARNA4-201ENST00000629045 FOXR1Q6PIV2 292 aa4.83□□□□□ -1.64
SCARNA4-201ENST00000629045 CAPN12Q6ZSI9 719 aa4.83□□□□□ -1.64
SCARNA4-201ENST00000629045 C7orf43Q8WVR3 580 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms