RNA–Protein interactions for RNA: ENST00000624341.3

ERCC6-213, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 5,761 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-213ENST00000624341 BMP2KLQ5H9B9 411 aa6.62□□□□□ -1.35
ERCC6-213ENST00000624341 CCDC158Q5M9N0 1113 aa6.62□□□□□ -1.35
ERCC6-213ENST00000624341 PPP4R3BQ5MIZ7 849 aa6.62□□□□□ -1.35
ERCC6-213ENST00000624341 ZNF830Q96NB3 372 aaPredicted RBP6.62□□□□□ -1.35
ERCC6-213ENST00000624341 CGNQ9P2M7 1197 aaKnown RBP6.62□□□□□ -1.35
ERCC6-213ENST00000624341 EIF3JO75822 258 aaKnown RBP6.62□□□□□ -1.35
ERCC6-213ENST00000624341 ALDH1L2Q3SY69 923 aa6.62□□□□□ -1.35
ERCC6-213ENST00000624341 TTC39AQ5SRH9 613 aa6.62□□□□□ -1.35
ERCC6-213ENST00000624341 DHX37Q8IY37 1157 aaKnown RBP6.62□□□□□ -1.35
ERCC6-213ENST00000624341 KIF18AQ8NI77 898 aa6.62□□□□□ -1.35
ERCC6-213ENST00000624341 TFIP11Q9UBB9 837 aaKnown RBP6.62□□□□□ -1.35
ERCC6-213ENST00000624341 CEP170BQ9Y4F5 1589 aaPredicted RBP6.62□□□□□ -1.35
ERCC6-213ENST00000624341 URI1O94763 535 aaPredicted RBP6.62□□□□□ -1.35
ERCC6-213ENST00000624341 CEBPAP49715 358 aaPredicted RBP6.62□□□□□ -1.35
ERCC6-213ENST00000624341 ZNF530Q6P9A1 599 aaPredicted RBP6.62□□□□□ -1.35
ERCC6-213ENST00000624341 CLIP2Q9UDT6 1046 aa6.62□□□□□ -1.35
ERCC6-213ENST00000624341 DHX29Q7Z478 1369 aaKnown RBP6.61□□□□□ -1.35
ERCC6-213ENST00000624341 TXLNAP40222 546 aa6.61□□□□□ -1.35
ERCC6-213ENST00000624341 ZSCAN23Q3MJ62 389 aa6.61□□□□□ -1.35
ERCC6-213ENST00000624341 HSP90AB3PQ58FF7 597 aa6.61□□□□□ -1.35
ERCC6-213ENST00000624341 TRIM22Q8IYM9 498 aa6.61□□□□□ -1.35
ERCC6-213ENST00000624341 CCDC191Q8NCU4 936 aa6.61□□□□□ -1.35
ERCC6-213ENST00000624341 NUP133Q8WUM0 1156 aa6.61□□□□□ -1.35
ERCC6-213ENST00000624341 TRIM34Q9BYJ4 488 aa6.61□□□□□ -1.35
ERCC6-213ENST00000624341 EIF2AK4Q9P2K8 1649 aaKnown RBP6.61□□□□□ -1.35
ERCC6-213ENST00000624341 SCAND2PQ9GZW5 306 aaPredicted RBP6.61□□□□□ -1.35
ERCC6-213ENST00000624341 CENPHQ9H3R5 247 aa6.61□□□□□ -1.35
ERCC6-213ENST00000624341 POLR3GO15318 223 aaPredicted RBP6.61□□□□□ -1.35
ERCC6-213ENST00000624341 HCLS1P14317 486 aaPredicted RBP6.61□□□□□ -1.35
ERCC6-213ENST00000624341 PIP4K2AP48426 406 aaPredicted RBP6.61□□□□□ -1.35
ERCC6-213ENST00000624341 HSP90AB2PQ58FF8 381 aa6.61□□□□□ -1.35
ERCC6-213ENST00000624341 ZFYVE27Q5T4F4 411 aa6.61□□□□□ -1.35
ERCC6-213ENST00000624341 TSHZ3Q63HK5 1081 aa6.61□□□□□ -1.35
ERCC6-213ENST00000624341 SMTNL1A8MU46 457 aa6.61□□□□□ -1.35
ERCC6-213ENST00000624341 RAB11FIP3O75154 756 aa6.61□□□□□ -1.35
ERCC6-213ENST00000624341 GUCY1B3Q02153 619 aa6.61□□□□□ -1.35
ERCC6-213ENST00000624341 KIF1BPQ96EK5 621 aa6.61□□□□□ -1.35
ERCC6-213ENST00000624341 ZNF692Q9BU19 519 aaPredicted RBP6.61□□□□□ -1.35
ERCC6-213ENST00000624341 DACH1Q9UI36 760 aa6.61□□□□□ -1.35
ERCC6-213ENST00000624341 LRRFIP2Q9Y608 721 aaKnown RBP6.61□□□□□ -1.35
ERCC6-213ENST00000624341 A2ML1A8K2U0 1454 aa6.61□□□□□ -1.35
ERCC6-213ENST00000624341 GLRX3O76003 335 aaKnown RBP6.61□□□□□ -1.35
ERCC6-213ENST00000624341 KRT32Q14532 448 aa6.61□□□□□ -1.35
ERCC6-213ENST00000624341 ARHGAP29Q52LW3 1261 aa6.61□□□□□ -1.35
ERCC6-213ENST00000624341 CCDC181Q5TID7 509 aa6.61□□□□□ -1.35
ERCC6-213ENST00000624341 RBM42Q9BTD8 480 aaKnown RBP6.61□□□□□ -1.35
ERCC6-213ENST00000624341 BOLA2Q9H3K6 86 aa6.61□□□□□ -1.35
ERCC6-213ENST00000624341 DEF6Q9H4E7 631 aa6.61□□□□□ -1.35
ERCC6-213ENST00000624341 CNNM1Q9NRU3 951 aa6.61□□□□□ -1.35
ERCC6-213ENST00000624341 FBXO3Q9UK99 471 aa6.61□□□□□ -1.35
ERCC6-213ENST00000624341 LIMCH1Q9UPQ0 1083 aa6.61□□□□□ -1.35
ERCC6-213ENST00000624341 MBD5Q9P267 1494 aa6.61□□□□□ -1.35
ERCC6-213ENST00000624341 PTPRKQ15262 1439 aa6.6□□□□□ -1.35
ERCC6-213ENST00000624341 KIAA0754O94854 1291 aa6.6□□□□□ -1.35
ERCC6-213ENST00000624341 CCDC43Q96MW1 224 aaKnown RBP6.6□□□□□ -1.35
ERCC6-213ENST00000624341 SPG7Q9UQ90 795 aa6.6□□□□□ -1.35
ERCC6-213ENST00000624341 DYNC1I1O14576 645 aa6.6□□□□□ -1.35
ERCC6-213ENST00000624341 MCM5P33992 734 aa6.6□□□□□ -1.35
ERCC6-213ENST00000624341 ANO10Q9NW15 660 aa6.6□□□□□ -1.35
ERCC6-213ENST00000624341 SEC24BO95487 1268 aa6.6□□□□□ -1.35
ERCC6-213ENST00000624341 CDK5RAP3Q96JB5 506 aa6.6□□□□□ -1.35
ERCC6-213ENST00000624341 CCDC69A6NI79 296 aa6.59□□□□□ -1.35
ERCC6-213ENST00000624341 KIF2AO00139 706 aaPredicted RBP6.59□□□□□ -1.35
ERCC6-213ENST00000624341 EPB41L2O43491 1005 aaKnown RBP6.59□□□□□ -1.35
ERCC6-213ENST00000624341 ODF2Q5BJF6 829 aa6.59□□□□□ -1.35
ERCC6-213ENST00000624341 ESCO1Q5FWF5 840 aa6.59□□□□□ -1.35
ERCC6-213ENST00000624341 GIMAP6Q6P9H5 292 aa6.59□□□□□ -1.35
ERCC6-213ENST00000624341 POLR1AO95602 1720 aaPredicted RBP6.59□□□□□ -1.35
ERCC6-213ENST00000624341 STX6O43752 255 aa6.59□□□□□ -1.35
ERCC6-213ENST00000624341 CCDC85AQ96PX6 553 aaPredicted RBP6.59□□□□□ -1.35
ERCC6-213ENST00000624341 PLCD4Q9BRC7 762 aa6.59□□□□□ -1.35
ERCC6-213ENST00000624341 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.59□□□□□ -1.35
ERCC6-213ENST00000624341 TMX1Q9H3N1 280 aa6.59□□□□□ -1.35
ERCC6-213ENST00000624341 PDIA4P13667 645 aaKnown RBP6.59□□□□□ -1.35
ERCC6-213ENST00000624341 TNNQ9UQP3 1299 aa6.59□□□□□ -1.35
ERCC6-213ENST00000624341 EMILIN1Q9Y6C2 1016 aa6.59□□□□□ -1.35
ERCC6-213ENST00000624341 NLRP1Q9C000 1473 aa6.59□□□□□ -1.35
ERCC6-213ENST00000624341 GOLGA6L10A6NI86 522 aa6.59□□□□□ -1.35
ERCC6-213ENST00000624341 LRSAM1Q6UWE0 723 aa6.59□□□□□ -1.35
ERCC6-213ENST00000624341 RBM33Q96EV2 1170 aaKnown RBP6.59□□□□□ -1.35
ERCC6-213ENST00000624341 TANGO6Q9C0B7 1094 aa6.59□□□□□ -1.35
ERCC6-213ENST00000624341 CCDC8Q9H0W5 538 aaPredicted RBP6.59□□□□□ -1.35
ERCC6-213ENST00000624341 SH2B1Q9NRF2 756 aaPredicted RBP6.59□□□□□ -1.35
ERCC6-213ENST00000624341 CPS1P31327 1500 aa6.59□□□□□ -1.35
ERCC6-213ENST00000624341 PZPP20742 1482 aa6.59□□□□□ -1.36
ERCC6-213ENST00000624341 ATAD2Q6PL18 1390 aa6.59□□□□□ -1.36
ERCC6-213ENST00000624341 PPFIA3O75145 1194 aa6.59□□□□□ -1.36
ERCC6-213ENST00000624341 GTF2F1P35269 517 aaKnown RBP eCLIP6.59□□□□□ -1.36
ERCC6-213ENST00000624341 ZNF165P49910 485 aa6.59□□□□□ -1.36
ERCC6-213ENST00000624341 TAF3Q5VWG9 929 aa6.59□□□□□ -1.36
ERCC6-213ENST00000624341 KLHL10Q6JEL2 608 aa6.59□□□□□ -1.36
ERCC6-213ENST00000624341 CCAR1Q8IX12 1150 aaKnown RBP6.59□□□□□ -1.36
ERCC6-213ENST00000624341 TMX3Q96JJ7 454 aa6.59□□□□□ -1.36
ERCC6-213ENST00000624341 CEP126Q9P2H0 1117 aa6.59□□□□□ -1.36
ERCC6-213ENST00000624341 RNF17Q9BXT8 1623 aaKnown RBP6.58□□□□□ -1.36
ERCC6-213ENST00000624341 TNRQ92752 1358 aa6.58□□□□□ -1.36
ERCC6-213ENST00000624341 DISP3Q9P2K9 1392 aa6.58□□□□□ -1.36
ERCC6-213ENST00000624341 BTBD11A6QL63 1104 aa6.58□□□□□ -1.36
ERCC6-213ENST00000624341 BIN1O00499 593 aa6.58□□□□□ -1.36
ERCC6-213ENST00000624341 GJB2P29033 226 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms