RNA–Protein interactions for RNA: ENST00000622534.1

GTF3C2-214, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5 BASIC

Gene GTF3C2, Length 1,858 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-214ENST00000622534 ATP6V1AP38606 617 aa18.54■□□□□ 0.56
GTF3C2-214ENST00000622534 ARHGAP45Q92619 1136 aa18.54■□□□□ 0.56
GTF3C2-214ENST00000622534 BCL2L13Q9BXK5 485 aa18.54■□□□□ 0.56
GTF3C2-214ENST00000622534 CYP19A1P11511 503 aaPredicted RBP18.53■□□□□ 0.56
GTF3C2-214ENST00000622534 HMGB2P26583 209 aaKnown RBP18.53■□□□□ 0.56
GTF3C2-214ENST00000622534 PDIA6Q15084 440 aa18.53■□□□□ 0.56
GTF3C2-214ENST00000622534 TNS1Q9HBL0 1735 aaKnown RBP18.53■□□□□ 0.56
GTF3C2-214ENST00000622534 IPO8O15397 1037 aaKnown RBP18.52■□□□□ 0.56
GTF3C2-214ENST00000622534 HYPKQ9NX55 129 aa18.52■□□□□ 0.56
GTF3C2-214ENST00000622534 CHPF2Q9P2E5 772 aa18.52■□□□□ 0.56
GTF3C2-214ENST00000622534 CACNA1FO60840 1977 aa18.52■□□□□ 0.56
GTF3C2-214ENST00000622534 SLC27A3Q5K4L6 730 aa18.52■□□□□ 0.55
GTF3C2-214ENST00000622534 NECTIN2Q92692 538 aa18.52■□□□□ 0.55
GTF3C2-214ENST00000622534 RGPD3A6NKT7 1758 aaPredicted RBP18.51■□□□□ 0.55
GTF3C2-214ENST00000622534 RGPD4Q7Z3J3 1758 aa18.51■□□□□ 0.55
GTF3C2-214ENST00000622534 PTPRCP08575 1304 aa18.51■□□□□ 0.55
GTF3C2-214ENST00000622534 TCERG1O14776 1098 aaKnown RBP18.51■□□□□ 0.55
GTF3C2-214ENST00000622534 ITPK1Q13572 414 aa18.51■□□□□ 0.55
GTF3C2-214ENST00000622534 NOB1Q9ULX3 412 aaKnown RBP18.51■□□□□ 0.55
GTF3C2-214ENST00000622534 RREB1Q92766 1687 aa18.5■□□□□ 0.55
GTF3C2-214ENST00000622534 ZKSCAN2Q63HK3 967 aa18.5■□□□□ 0.55
GTF3C2-214ENST00000622534 CCNL1Q9UK58 526 aaPredicted RBP18.5■□□□□ 0.55
GTF3C2-214ENST00000622534 COL5A3P25940 1745 aaPredicted RBP18.5■□□□□ 0.55
GTF3C2-214ENST00000622534 LRP10Q7Z4F1 713 aa18.5■□□□□ 0.55
GTF3C2-214ENST00000622534 NBPF26B4DH59 902 aa18.49■□□□□ 0.55
GTF3C2-214ENST00000622534 APBA3O96018 575 aa18.49■□□□□ 0.55
GTF3C2-214ENST00000622534 NBPF14Q5TI25 921 aa18.49■□□□□ 0.55
GTF3C2-214ENST00000622534 NBPF10Q6P3W6 841 aaKnown RBP18.49■□□□□ 0.55
GTF3C2-214ENST00000622534 NBPF15Q8N660 670 aa18.49■□□□□ 0.55
GTF3C2-214ENST00000622534 A1BGP04217 495 aa18.48■□□□□ 0.55
GTF3C2-214ENST00000622534 MS4A1P11836 297 aa18.48■□□□□ 0.55
GTF3C2-214ENST00000622534 FLIIQ13045 1269 aa18.48■□□□□ 0.55
GTF3C2-214ENST00000622534 PROSER3Q2NL68 480 aa18.48■□□□□ 0.55
GTF3C2-214ENST00000622534 ATF7IPQ6VMQ6 1270 aa18.48■□□□□ 0.55
GTF3C2-214ENST00000622534 CNTNAP4Q9C0A0 1308 aa18.48■□□□□ 0.55
GTF3C2-214ENST00000622534 PDE3AQ14432 1141 aa18.48■□□□□ 0.55
GTF3C2-214ENST00000622534 RC3H1Q5TC82 1133 aaKnown RBP18.48■□□□□ 0.55
GTF3C2-214ENST00000622534 G2E3Q7L622 706 aa18.48■□□□□ 0.55
GTF3C2-214ENST00000622534 CCDC125Q86Z20 511 aa18.48■□□□□ 0.55
GTF3C2-214ENST00000622534 FRAT1Q92837 279 aaPredicted RBP18.48■□□□□ 0.55
GTF3C2-214ENST00000622534 API5Q9BZZ5 524 aaKnown RBP18.48■□□□□ 0.55
GTF3C2-214ENST00000622534 CANXP27824 592 aaKnown RBP18.47■□□□□ 0.55
GTF3C2-214ENST00000622534 INTS5Q6P9B9 1019 aaKnown RBP18.47■□□□□ 0.55
GTF3C2-214ENST00000622534 LINC00116Q8NCU8 138 aa18.47■□□□□ 0.55
GTF3C2-214ENST00000622534 CCDC87Q9NVE4 849 aa18.47■□□□□ 0.55
GTF3C2-214ENST00000622534 PLIN1O60240 522 aa18.46■□□□□ 0.54
GTF3C2-214ENST00000622534 TRIM27P14373 513 aa18.46■□□□□ 0.54
GTF3C2-214ENST00000622534 IL6STP40189 918 aaPredicted RBP18.46■□□□□ 0.54
GTF3C2-214ENST00000622534 CRKLP46109 303 aaKnown RBP18.46■□□□□ 0.54
GTF3C2-214ENST00000622534 TXNRD1Q16881 649 aa18.46■□□□□ 0.54
GTF3C2-214ENST00000622534 PHAXQ9H814 394 aaKnown RBP18.46■□□□□ 0.54
GTF3C2-214ENST00000622534 ANXA1P04083 346 aa18.45■□□□□ 0.54
GTF3C2-214ENST00000622534 PROM2Q8N271 834 aa18.45■□□□□ 0.54
GTF3C2-214ENST00000622534 TAF1LQ8IZX4 1826 aa18.44■□□□□ 0.54
GTF3C2-214ENST00000622534 MYL6BP14649 208 aa18.44■□□□□ 0.54
GTF3C2-214ENST00000622534 LRRC4BQ9NT99 713 aa18.44■□□□□ 0.54
GTF3C2-214ENST00000622534 ZBTB1Q9Y2K1 713 aa18.44■□□□□ 0.54
GTF3C2-214ENST00000622534 EP400Q96L91 3159 aa18.44■□□□□ 0.54
GTF3C2-214ENST00000622534 ABCC4O15439 1325 aa18.43■□□□□ 0.54
GTF3C2-214ENST00000622534 DDX58O95786 925 aaKnown RBP18.43■□□□□ 0.54
GTF3C2-214ENST00000622534 EIF5P55010 431 aaKnown RBP18.43■□□□□ 0.54
GTF3C2-214ENST00000622534 SF3B2Q13435 895 aaKnown RBP18.43■□□□□ 0.54
GTF3C2-214ENST00000622534 FKBP5Q13451 457 aaPredicted RBP18.43■□□□□ 0.54
GTF3C2-214ENST00000622534 DZIP1LQ8IYY4 767 aaKnown RBP18.43■□□□□ 0.54
GTF3C2-214ENST00000622534 XAGE3Q8WTP9 111 aa18.43■□□□□ 0.54
GTF3C2-214ENST00000622534 COPS6Q7L5N1 327 aa18.42■□□□□ 0.54
GTF3C2-214ENST00000622534 CAMKK2Q96RR4 588 aa18.42■□□□□ 0.54
GTF3C2-214ENST00000622534 C4BP0C0L5 1744 aa18.42■□□□□ 0.54
GTF3C2-214ENST00000622534 PXDNLA1KZ92 1463 aa18.42■□□□□ 0.54
GTF3C2-214ENST00000622534 PIP4K2AP48426 406 aaPredicted RBP18.41■□□□□ 0.54
GTF3C2-214ENST00000622534 KCNQ4P56696 695 aa18.41■□□□□ 0.54
GTF3C2-214ENST00000622534 KSR2Q6VAB6 950 aa18.41■□□□□ 0.54
GTF3C2-214ENST00000622534 BAG6P46379 1132 aa18.41■□□□□ 0.54
GTF3C2-214ENST00000622534 RPS6KA4O75676 772 aa18.4■□□□□ 0.54
GTF3C2-214ENST00000622534 NEFLP07196 543 aa18.4■□□□□ 0.54
GTF3C2-214ENST00000622534 FTSJ3Q8IY81 847 aaKnown RBP18.4■□□□□ 0.54
GTF3C2-214ENST00000622534 ADCY9O60503 1353 aa18.4■□□□□ 0.54
GTF3C2-214ENST00000622534 C20orf194Q5TEA3 1177 aa18.39■□□□□ 0.54
GTF3C2-214ENST00000622534 PLBD2Q8NHP8 589 aa18.39■□□□□ 0.54
GTF3C2-214ENST00000622534 TNNQ9UQP3 1299 aa18.39■□□□□ 0.54
GTF3C2-214ENST00000622534 MYH14Q7Z406 1995 aaKnown RBP18.39■□□□□ 0.54
GTF3C2-214ENST00000622534 A0A087WZG4 1122 aa18.39■□□□□ 0.53
GTF3C2-214ENST00000622534 RLBP1P12271 317 aa18.39■□□□□ 0.53
GTF3C2-214ENST00000622534 INTS3Q68E01 1043 aaKnown RBP18.39■□□□□ 0.53
GTF3C2-214ENST00000622534 ANKRD13DQ6ZTN6 518 aa18.39■□□□□ 0.53
GTF3C2-214ENST00000622534 PI4KAP2A4QPH2 592 aa18.38■□□□□ 0.53
GTF3C2-214ENST00000622534 RGL2O15211 777 aa18.38■□□□□ 0.53
GTF3C2-214ENST00000622534 AIMP1Q12904 312 aaKnown RBP18.38■□□□□ 0.53
GTF3C2-214ENST00000622534 PI4KAP1Q8N8J0 262 aa18.38■□□□□ 0.53
GTF3C2-214ENST00000622534 PANK1Q8TE04 598 aa18.38■□□□□ 0.53
GTF3C2-214ENST00000622534 DNAAF4Q8WXU2 420 aa18.38■□□□□ 0.53
GTF3C2-214ENST00000622534 ATP10DQ9P241 1426 aa18.38■□□□□ 0.53
GTF3C2-214ENST00000622534 IBTKQ9P2D0 1353 aaPredicted RBP18.38■□□□□ 0.53
GTF3C2-214ENST00000622534 NPM2Q86SE8 214 aaKnown RBP18.37■□□□□ 0.53
GTF3C2-214ENST00000622534 CLUAP1Q96AJ1 413 aa18.37■□□□□ 0.53
GTF3C2-214ENST00000622534 COL15A1P39059 1388 aa18.37■□□□□ 0.53
GTF3C2-214ENST00000622534 ERVV-1B6SEH8 477 aa18.37■□□□□ 0.53
GTF3C2-214ENST00000622534 CCT4P50991 539 aaKnown RBP18.37■□□□□ 0.53
GTF3C2-214ENST00000622534 EN1Q05925 392 aaPredicted RBP18.37■□□□□ 0.53
GTF3C2-214ENST00000622534 KIF6Q6ZMV9 814 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 133.6 ms