RNA–Protein interactions for RNA: ENST00000622176.4

SLC6A6-209, Transcript of solute carrier family 6 member 6, humanhuman

TSL 1 (best)

Gene SLC6A6, Length 1,116 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-209ENST00000622176 STK32BQ9NY57 414 aa22.67■■□□□ 1.22
SLC6A6-209ENST00000622176 USP16Q9Y5T5 823 aa22.67■■□□□ 1.22
SLC6A6-209ENST00000622176 COL5A3P25940 1745 aaPredicted RBP22.66■■□□□ 1.22
SLC6A6-209ENST00000622176 SLC15A2Q16348 729 aa22.66■■□□□ 1.22
SLC6A6-209ENST00000622176 C4BP0C0L5 1744 aa22.65■■□□□ 1.22
SLC6A6-209ENST00000622176 HOXB7P09629 217 aa22.65■■□□□ 1.22
SLC6A6-209ENST00000622176 CRKLP46109 303 aaKnown RBP22.65■■□□□ 1.22
SLC6A6-209ENST00000622176 INTS5Q6P9B9 1019 aaKnown RBP22.65■■□□□ 1.22
SLC6A6-209ENST00000622176 CDCA7LQ96GN5 454 aa22.65■■□□□ 1.22
SLC6A6-209ENST00000622176 TRMT2AQ8IZ69 625 aaKnown RBP22.64■■□□□ 1.21
SLC6A6-209ENST00000622176 C8orf58Q8NAV2 365 aa22.64■■□□□ 1.21
SLC6A6-209ENST00000622176 AK7Q96M32 723 aa22.64■■□□□ 1.21
SLC6A6-209ENST00000622176 CCDC87Q9NVE4 849 aa22.64■■□□□ 1.21
SLC6A6-209ENST00000622176 DUSP27Q5VZP5 1158 aa22.63■■□□□ 1.21
SLC6A6-209ENST00000622176 SOS1Q07889 1333 aaPredicted RBP22.62■■□□□ 1.21
SLC6A6-209ENST00000622176 MYH14Q7Z406 1995 aaKnown RBP22.61■■□□□ 1.21
SLC6A6-209ENST00000622176 GNPATO15228 680 aa22.61■■□□□ 1.21
SLC6A6-209ENST00000622176 RPS6KA4O75676 772 aa22.61■■□□□ 1.21
SLC6A6-209ENST00000622176 TFCP2L1Q9NZI6 479 aa22.61■■□□□ 1.21
SLC6A6-209ENST00000622176 A1BGP04217 495 aa22.6■■□□□ 1.21
SLC6A6-209ENST00000622176 EXOSC9Q06265 439 aaKnown RBP22.6■■□□□ 1.21
SLC6A6-209ENST00000622176 TSPYL6Q8N831 410 aa22.6■■□□□ 1.21
SLC6A6-209ENST00000622176 ZBTB1Q9Y2K1 713 aa22.6■■□□□ 1.21
SLC6A6-209ENST00000622176 ELL2O00472 640 aaPredicted RBP22.59■■□□□ 1.21
SLC6A6-209ENST00000622176 AMIGO3Q86WK7 504 aa22.59■■□□□ 1.21
SLC6A6-209ENST00000622176 RTCBQ9Y3I0 505 aaKnown RBP22.59■■□□□ 1.21
SLC6A6-209ENST00000622176 ERBB4Q15303 1308 aa22.58■■□□□ 1.21
SLC6A6-209ENST00000622176 LAMB4A4D0S4 1761 aa22.58■■□□□ 1.21
SLC6A6-209ENST00000622176 EIF2S2P20042 333 aaKnown RBP22.58■■□□□ 1.21
SLC6A6-209ENST00000622176 SSFA2P28290 1259 aa22.58■■□□□ 1.21
SLC6A6-209ENST00000622176 NBPF26B4DH59 902 aa22.57■■□□□ 1.2
SLC6A6-209ENST00000622176 CANXP27824 592 aaKnown RBP22.57■■□□□ 1.2
SLC6A6-209ENST00000622176 TWISTNBQ3B726 338 aaPredicted RBP22.57■■□□□ 1.2
SLC6A6-209ENST00000622176 NBPF10Q6P3W6 841 aaKnown RBP22.57■■□□□ 1.2
SLC6A6-209ENST00000622176 NBPF15Q8N660 670 aa22.57■■□□□ 1.2
SLC6A6-209ENST00000622176 FLAD1Q8NFF5 587 aa22.57■■□□□ 1.2
SLC6A6-209ENST00000622176 PNPLA7Q6ZV29 1317 aa22.57■■□□□ 1.2
SLC6A6-209ENST00000622176 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.56■■□□□ 1.2
SLC6A6-209ENST00000622176 ADRA2BP18089 450 aa22.56■■□□□ 1.2
SLC6A6-209ENST00000622176 IL6STP40189 918 aaPredicted RBP22.56■■□□□ 1.2
SLC6A6-209ENST00000622176 EIF5P55010 431 aaKnown RBP22.56■■□□□ 1.2
SLC6A6-209ENST00000622176 HDGFL1Q5TGJ6 251 aa22.56■■□□□ 1.2
SLC6A6-209ENST00000622176 CHMP4AQ9BY43 222 aa22.56■■□□□ 1.2
SLC6A6-209ENST00000622176 UBR3Q6ZT12 1888 aa22.56■■□□□ 1.2
SLC6A6-209ENST00000622176 CASZ1Q86V15 1759 aa22.55■■□□□ 1.2
SLC6A6-209ENST00000622176 VAMP4O75379 141 aa22.55■■□□□ 1.2
SLC6A6-209ENST00000622176 SMIM5Q71RC9 77 aa22.55■■□□□ 1.2
SLC6A6-209ENST00000622176 PDIA6Q15084 440 aa22.54■■□□□ 1.2
SLC6A6-209ENST00000622176 TRAPPC3LQ5T215 181 aa22.54■■□□□ 1.2
SLC6A6-209ENST00000622176 COL23A1Q86Y22 540 aaPredicted RBP22.54■■□□□ 1.2
SLC6A6-209ENST00000622176 QSER1Q2KHR3 1735 aa22.54■■□□□ 1.2
SLC6A6-209ENST00000622176 TUBGCP6Q96RT7 1819 aa22.53■■□□□ 1.2
SLC6A6-209ENST00000622176 PHF14O94880 888 aa22.53■■□□□ 1.2
SLC6A6-209ENST00000622176 PIP4K2AP48426 406 aaPredicted RBP22.53■■□□□ 1.2
SLC6A6-209ENST00000622176 NECTIN2Q92692 538 aa22.53■■□□□ 1.2
SLC6A6-209ENST00000622176 CCDC30Q5VVM6 783 aa22.52■■□□□ 1.2
SLC6A6-209ENST00000622176 ARHGEF1Q92888 912 aaKnown RBP22.52■■□□□ 1.2
SLC6A6-209ENST00000622176 DDX21Q9NR30 783 aaKnown RBP eCLIP22.52■■□□□ 1.2
SLC6A6-209ENST00000622176 LRP10Q7Z4F1 713 aa22.51■■□□□ 1.19
SLC6A6-209ENST00000622176 YTHDC1Q96MU7 727 aaKnown RBP22.51■■□□□ 1.19
SLC6A6-209ENST00000622176 PDGFDQ9GZP0 370 aaPredicted RBP22.51■■□□□ 1.19
SLC6A6-209ENST00000622176 CHPF2Q9P2E5 772 aa22.51■■□□□ 1.19
SLC6A6-209ENST00000622176 DBF4Q9UBU7 674 aaPredicted RBP22.51■■□□□ 1.19
SLC6A6-209ENST00000622176 COL15A1P39059 1388 aa22.5■■□□□ 1.19
SLC6A6-209ENST00000622176 A0A087WZG4 1122 aa22.5■■□□□ 1.19
SLC6A6-209ENST00000622176 PROSER3Q2NL68 480 aa22.5■■□□□ 1.19
SLC6A6-209ENST00000622176 CT47B1P0C2W7 299 aaPredicted RBP22.49■■□□□ 1.19
SLC6A6-209ENST00000622176 MYL6BP14649 208 aa22.48■■□□□ 1.19
SLC6A6-209ENST00000622176 RFC4P35249 363 aa22.48■■□□□ 1.19
SLC6A6-209ENST00000622176 NPM2Q86SE8 214 aaKnown RBP22.48■■□□□ 1.19
SLC6A6-209ENST00000622176 SLC16A10Q8TF71 515 aa22.48■■□□□ 1.19
SLC6A6-209ENST00000622176 ZNF330Q9Y3S2 320 aaPredicted RBP22.48■■□□□ 1.19
SLC6A6-209ENST00000622176 MSH5O43196 834 aa22.47■■□□□ 1.19
SLC6A6-209ENST00000622176 ANXA1P04083 346 aa22.47■■□□□ 1.19
SLC6A6-209ENST00000622176 ZNF428Q96B54 188 aa22.47■■□□□ 1.19
SLC6A6-209ENST00000622176 HYPKQ9NX55 129 aa22.47■■□□□ 1.19
SLC6A6-209ENST00000622176 NARFQ9UHQ1 456 aa22.47■■□□□ 1.19
SLC6A6-209ENST00000622176 STK31Q9BXU1 1019 aa22.46■■□□□ 1.19
SLC6A6-209ENST00000622176 USP42Q9H9J4 1324 aaKnown RBP22.46■■□□□ 1.19
SLC6A6-209ENST00000622176 DZIP3Q86Y13 1208 aaKnown RBP22.45■■□□□ 1.18
SLC6A6-209ENST00000622176 TBC1D2BQ9UPU7 963 aa22.45■■□□□ 1.18
SLC6A6-209ENST00000622176 TCERG1O14776 1098 aaKnown RBP22.44■■□□□ 1.18
SLC6A6-209ENST00000622176 SRP68Q9UHB9 627 aaKnown RBP22.44■■□□□ 1.18
SLC6A6-209ENST00000622176 C4AP0C0L4 1744 aa22.43■■□□□ 1.18
SLC6A6-209ENST00000622176 ZPR1O75312 459 aa22.43■■□□□ 1.18
SLC6A6-209ENST00000622176 SLC4A2P04920 1241 aa22.43■■□□□ 1.18
SLC6A6-209ENST00000622176 TTLL7Q6ZT98 887 aa22.43■■□□□ 1.18
SLC6A6-209ENST00000622176 COPS6Q7L5N1 327 aa22.43■■□□□ 1.18
SLC6A6-209ENST00000622176 XAGE3Q8WTP9 111 aa22.43■■□□□ 1.18
SLC6A6-209ENST00000622176 SPON1Q9HCB6 807 aa22.43■■□□□ 1.18
SLC6A6-209ENST00000622176 RGL2O15211 777 aa22.42■■□□□ 1.18
SLC6A6-209ENST00000622176 CAMTA2O94983 1202 aa22.42■■□□□ 1.18
SLC6A6-209ENST00000622176 GYS1P13807 737 aa22.42■■□□□ 1.18
SLC6A6-209ENST00000622176 USPL1Q5W0Q7 1092 aa22.42■■□□□ 1.18
SLC6A6-209ENST00000622176 ARXQ96QS3 562 aa22.41■■□□□ 1.18
SLC6A6-209ENST00000622176 MTFR1LQ9H019 292 aa22.41■■□□□ 1.18
SLC6A6-209ENST00000622176 BCL2L12Q9HB09 334 aa22.41■■□□□ 1.18
SLC6A6-209ENST00000622176 MAP3K15Q6ZN16 1313 aa22.4■■□□□ 1.18
SLC6A6-209ENST00000622176 ERVV-1B6SEH8 477 aa22.4■■□□□ 1.18
SLC6A6-209ENST00000622176 ZBTB7AO95365 584 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms