RNA–Protein interactions for RNA: ENST00000621420.5

SRP19-208, Transcript of signal recognition particle 19, humanhuman

TSL 3 BASIC

Gene SRP19, Length 1,270 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP19-208ENST00000621420 PCDH11XQ9BZA7 1347 aa16.88■□□□□ 0.29
SRP19-208ENST00000621420 PCDH11YQ9BZA8 1340 aa16.88■□□□□ 0.29
SRP19-208ENST00000621420 CYP27B1O15528 508 aa16.87■□□□□ 0.29
SRP19-208ENST00000621420 TATP17735 454 aaPredicted RBP16.87■□□□□ 0.29
SRP19-208ENST00000621420 SULT6B1Q6IMI4 303 aa16.86■□□□□ 0.29
SRP19-208ENST00000621420 PARP3Q9Y6F1 533 aa16.86■□□□□ 0.29
SRP19-208ENST00000621420 ZC3H4Q9UPT8 1303 aaKnown RBP16.86■□□□□ 0.29
SRP19-208ENST00000621420 POTECB2RU33 542 aa16.85■□□□□ 0.29
SRP19-208ENST00000621420 GYS1P13807 737 aa16.85■□□□□ 0.29
SRP19-208ENST00000621420 CHRNA5P30532 468 aa16.85■□□□□ 0.29
SRP19-208ENST00000621420 ATP6V1AP38606 617 aa16.85■□□□□ 0.29
SRP19-208ENST00000621420 RGS19P49795 217 aa16.85■□□□□ 0.29
SRP19-208ENST00000621420 TRAPPC3LQ5T215 181 aa16.85■□□□□ 0.29
SRP19-208ENST00000621420 SPINK5Q9NQ38 1064 aaPredicted RBP16.85■□□□□ 0.29
SRP19-208ENST00000621420 CNTNAP1P78357 1384 aa16.85■□□□□ 0.29
SRP19-208ENST00000621420 KDM6AO15550 1401 aaPredicted RBP16.85■□□□□ 0.29
SRP19-208ENST00000621420 CCDC85CA6NKD9 419 aa16.84■□□□□ 0.29
SRP19-208ENST00000621420 HMOX1P09601 288 aa16.84■□□□□ 0.29
SRP19-208ENST00000621420 U2AF1L5P0DN76 240 aaPredicted RBP16.84■□□□□ 0.29
SRP19-208ENST00000621420 U2AF1Q01081 240 aaKnown RBP eCLIP16.84■□□□□ 0.29
SRP19-208ENST00000621420 NCAPD2Q15021 1401 aa16.84■□□□□ 0.29
SRP19-208ENST00000621420 AEBP1Q8IUX7 1158 aa16.83■□□□□ 0.28
SRP19-208ENST00000621420 ARHGEF1Q92888 912 aaKnown RBP16.83■□□□□ 0.28
SRP19-208ENST00000621420 ASAP1Q9ULH1 1129 aa16.83■□□□□ 0.28
SRP19-208ENST00000621420 RTCBQ9Y3I0 505 aaKnown RBP16.83■□□□□ 0.28
SRP19-208ENST00000621420 WDR43Q15061 677 aaKnown RBP eCLIP16.82■□□□□ 0.28
SRP19-208ENST00000621420 WBP1LQ9NX94 342 aa16.82■□□□□ 0.28
SRP19-208ENST00000621420 TIAM2Q8IVF5 1701 aa16.82■□□□□ 0.28
SRP19-208ENST00000621420 HSPA8P11142 646 aaKnown RBP16.81■□□□□ 0.28
SRP19-208ENST00000621420 LMNB1P20700 586 aa16.81■□□□□ 0.28
SRP19-208ENST00000621420 VEGFBP49765 207 aa16.81■□□□□ 0.28
SRP19-208ENST00000621420 U3KPZ7 1027 aaPredicted RBP16.81■□□□□ 0.28
SRP19-208ENST00000621420 CCDC88AQ3V6T2 1871 aa16.81■□□□□ 0.28
SRP19-208ENST00000621420 VIRMAQ69YN4 1812 aaKnown RBP16.8■□□□□ 0.28
SRP19-208ENST00000621420 CHADLQ6NUI6 762 aa16.8■□□□□ 0.28
SRP19-208ENST00000621420 MRS2Q9HD23 443 aa16.8■□□□□ 0.28
SRP19-208ENST00000621420 KDRP35968 1356 aa16.79■□□□□ 0.28
SRP19-208ENST00000621420 POTEIP0CG38 1075 aa16.79■□□□□ 0.28
SRP19-208ENST00000621420 POTEJP0CG39 1038 aa16.79■□□□□ 0.28
SRP19-208ENST00000621420 SPG7Q9UQ90 795 aa16.79■□□□□ 0.28
SRP19-208ENST00000621420 RFC4P35249 363 aa16.78■□□□□ 0.28
SRP19-208ENST00000621420 TNRC18O15417 2968 aaPredicted RBP16.78■□□□□ 0.28
SRP19-208ENST00000621420 NEFMP07197 916 aa16.77■□□□□ 0.28
SRP19-208ENST00000621420 PRKAR2BP31323 418 aa16.77■□□□□ 0.28
SRP19-208ENST00000621420 DDR1Q08345 913 aa16.77■□□□□ 0.28
SRP19-208ENST00000621420 CCDC184Q52MB2 194 aa16.77■□□□□ 0.28
SRP19-208ENST00000621420 PLEKHO1Q53GL0 409 aaPredicted RBP16.77■□□□□ 0.28
SRP19-208ENST00000621420 TMOD3Q9NYL9 352 aa16.77■□□□□ 0.28
SRP19-208ENST00000621420 NKX1-1Q15270 411 aaPredicted RBP16.76■□□□□ 0.27
SRP19-208ENST00000621420 RSPH6AQ9H0K4 717 aa16.76■□□□□ 0.27
SRP19-208ENST00000621420 ATG3Q9NT62 314 aa16.76■□□□□ 0.27
SRP19-208ENST00000621420 AMOTQ4VCS5 1084 aa16.75■□□□□ 0.27
SRP19-208ENST00000621420 SLC4A9Q96Q91 983 aa16.75■□□□□ 0.27
SRP19-208ENST00000621420 PNNQ9H307 717 aaKnown RBP16.75■□□□□ 0.27
SRP19-208ENST00000621420 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.75■□□□□ 0.27
SRP19-208ENST00000621420 PDE4DIPQ5VU43 2346 aa16.74■□□□□ 0.27
SRP19-208ENST00000621420 FKBP8Q14318 412 aa16.74■□□□□ 0.27
SRP19-208ENST00000621420 ZNF530Q6P9A1 599 aaPredicted RBP16.74■□□□□ 0.27
SRP19-208ENST00000621420 SRP68Q9UHB9 627 aaKnown RBP16.74■□□□□ 0.27
SRP19-208ENST00000621420 PASKQ96RG2 1323 aa16.73■□□□□ 0.27
SRP19-208ENST00000621420 RPS6KA4O75676 772 aa16.73■□□□□ 0.27
SRP19-208ENST00000621420 C1orf141Q5JVX7 400 aa16.73■□□□□ 0.27
SRP19-208ENST00000621420 RC3H1Q5TC82 1133 aaKnown RBP16.73■□□□□ 0.27
SRP19-208ENST00000621420 MYH14Q7Z406 1995 aaKnown RBP16.73■□□□□ 0.27
SRP19-208ENST00000621420 COL5A3P25940 1745 aaPredicted RBP16.73■□□□□ 0.27
SRP19-208ENST00000621420 MAPK8IP3Q9UPT6 1336 aa16.72■□□□□ 0.27
SRP19-208ENST00000621420 DPY19L2Q6NUT2 758 aa16.72■□□□□ 0.27
SRP19-208ENST00000621420 MIER1Q8N108 512 aa16.72■□□□□ 0.27
SRP19-208ENST00000621420 NFKBIEO00221 500 aa16.71■□□□□ 0.27
SRP19-208ENST00000621420 IFNL2Q8IZJ0 200 aa16.71■□□□□ 0.27
SRP19-208ENST00000621420 CFAP44Q96MT7 982 aa16.71■□□□□ 0.27
SRP19-208ENST00000621420 ADAMTS8Q9UP79 889 aa16.71■□□□□ 0.27
SRP19-208ENST00000621420 CNTNAP4Q9C0A0 1308 aa16.7■□□□□ 0.26
SRP19-208ENST00000621420 TMEM88BA6NKF7 163 aa16.7■□□□□ 0.26
SRP19-208ENST00000621420 CCER2I3L3R5 266 aa16.7■□□□□ 0.26
SRP19-208ENST00000621420 PHKG2P15735 406 aa16.7■□□□□ 0.26
SRP19-208ENST00000621420 GAS2L2Q8NHY3 880 aa16.7■□□□□ 0.26
SRP19-208ENST00000621420 RBM42Q9BTD8 480 aaKnown RBP16.7■□□□□ 0.26
SRP19-208ENST00000621420 POLRMTO00411 1230 aaKnown RBP16.69■□□□□ 0.26
SRP19-208ENST00000621420 MTHFSDQ2M296 383 aaKnown RBP16.69■□□□□ 0.26
SRP19-208ENST00000621420 CCDC146Q8IYE0 955 aa16.69■□□□□ 0.26
SRP19-208ENST00000621420 PHACTR3Q96KR7 559 aa16.69■□□□□ 0.26
SRP19-208ENST00000621420 HSP90AB1P08238 724 aaKnown RBP16.68■□□□□ 0.26
SRP19-208ENST00000621420 AKAP4Q5JQC9 854 aa16.68■□□□□ 0.26
SRP19-208ENST00000621420 FAM9BQ8IZU0 186 aa16.68■□□□□ 0.26
SRP19-208ENST00000621420 PNISRQ8TF01 805 aaKnown RBP16.68■□□□□ 0.26
SRP19-208ENST00000621420 ZNF831Q5JPB2 1677 aa16.68■□□□□ 0.26
SRP19-208ENST00000621420 USP42Q9H9J4 1324 aaKnown RBP16.68■□□□□ 0.26
SRP19-208ENST00000621420 DICER1Q9UPY3 1922 aaKnown RBP16.67■□□□□ 0.26
SRP19-208ENST00000621420 PLEKHF1Q96S99 279 aa16.67■□□□□ 0.26
SRP19-208ENST00000621420 DLEC1Q9Y238 1755 aa16.66■□□□□ 0.26
SRP19-208ENST00000621420 DDNO94850 711 aaPredicted RBP16.66■□□□□ 0.26
SRP19-208ENST00000621420 ITGBL1O95965 494 aaPredicted RBP16.66■□□□□ 0.26
SRP19-208ENST00000621420 TM4SF1P30408 202 aa16.66■□□□□ 0.26
SRP19-208ENST00000621420 MAP2K1Q02750 393 aaPredicted RBP16.66■□□□□ 0.26
SRP19-208ENST00000621420 ERFEQ4G0M1 354 aa16.66■□□□□ 0.26
SRP19-208ENST00000621420 TTLL6Q8N841 843 aa16.66■□□□□ 0.26
SRP19-208ENST00000621420 RUNDC1Q96C34 613 aa16.66■□□□□ 0.26
SRP19-208ENST00000621420 WDR33Q9C0J8 1336 aaKnown RBP16.66■□□□□ 0.26
SRP19-208ENST00000621420 RASSF10A6NK89 507 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms