RNA–Protein interactions for RNA: ENST00000620242.1

SRSF3-206, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-206ENST00000620242 LAS1LQ9Y4W2 734 aaKnown RBP16.81■□□□□ 0.28
SRSF3-206ENST00000620242 PNPLA7Q6ZV29 1317 aa16.8■□□□□ 0.28
SRSF3-206ENST00000620242 ERBB4Q15303 1308 aa16.79■□□□□ 0.28
SRSF3-206ENST00000620242 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.79■□□□□ 0.28
SRSF3-206ENST00000620242 GIGYF1O75420 1035 aaPredicted RBP16.79■□□□□ 0.28
SRSF3-206ENST00000620242 RFC4P35249 363 aa16.79■□□□□ 0.28
SRSF3-206ENST00000620242 MIS18AQ9NYP9 233 aa16.79■□□□□ 0.28
SRSF3-206ENST00000620242 KCNQ3O43525 872 aa16.78■□□□□ 0.28
SRSF3-206ENST00000620242 ZNF853P0CG23 659 aa16.78■□□□□ 0.28
SRSF3-206ENST00000620242 POLD1P28340 1107 aa16.78■□□□□ 0.28
SRSF3-206ENST00000620242 IL6STP40189 918 aaPredicted RBP16.78■□□□□ 0.28
SRSF3-206ENST00000620242 KDM3BQ7LBC6 1761 aa16.78■□□□□ 0.28
SRSF3-206ENST00000620242 COL5A3P25940 1745 aaPredicted RBP16.78■□□□□ 0.28
SRSF3-206ENST00000620242 PHF14O94880 888 aa16.77■□□□□ 0.28
SRSF3-206ENST00000620242 INTS5Q6P9B9 1019 aaKnown RBP16.77■□□□□ 0.28
SRSF3-206ENST00000620242 MYH16Q9H6N6 1097 aa16.77■□□□□ 0.28
SRSF3-206ENST00000620242 TJP1Q07157 1748 aa16.76■□□□□ 0.27
SRSF3-206ENST00000620242 ZPR1O75312 459 aa16.76■□□□□ 0.27
SRSF3-206ENST00000620242 COL23A1Q86Y22 540 aaPredicted RBP16.76■□□□□ 0.27
SRSF3-206ENST00000620242 NLGN1Q8N2Q7 840 aa16.76■□□□□ 0.27
SRSF3-206ENST00000620242 MBIPQ9NS73 344 aa16.75■□□□□ 0.27
SRSF3-206ENST00000620242 USP16Q9Y5T5 823 aa16.75■□□□□ 0.27
SRSF3-206ENST00000620242 UBR3Q6ZT12 1888 aa16.74■□□□□ 0.27
SRSF3-206ENST00000620242 RGL2O15211 777 aa16.74■□□□□ 0.27
SRSF3-206ENST00000620242 CANXP27824 592 aaKnown RBP16.74■□□□□ 0.27
SRSF3-206ENST00000620242 ARHGEF1Q92888 912 aaKnown RBP16.74■□□□□ 0.27
SRSF3-206ENST00000620242 ZBTB1Q9Y2K1 713 aa16.74■□□□□ 0.27
SRSF3-206ENST00000620242 ZBTB7AO95365 584 aa16.73■□□□□ 0.27
SRSF3-206ENST00000620242 EIF5P55010 431 aaKnown RBP16.73■□□□□ 0.27
SRSF3-206ENST00000620242 GOLGA2Q08379 1002 aa16.73■□□□□ 0.27
SRSF3-206ENST00000620242 PPP1R1BQ9UD71 204 aaPredicted RBP16.73■□□□□ 0.27
SRSF3-206ENST00000620242 SALL2Q9Y467 1007 aaPredicted RBP16.73■□□□□ 0.27
SRSF3-206ENST00000620242 CASZ1Q86V15 1759 aa16.73■□□□□ 0.27
SRSF3-206ENST00000620242 COL15A1P39059 1388 aa16.73■□□□□ 0.27
SRSF3-206ENST00000620242 SRCAPQ6ZRS2 3230 aa16.72■□□□□ 0.27
SRSF3-206ENST00000620242 E9PSI1 815 aa16.71■□□□□ 0.27
SRSF3-206ENST00000620242 A1BGP04217 495 aa16.71■□□□□ 0.27
SRSF3-206ENST00000620242 NARFQ9UHQ1 456 aa16.71■□□□□ 0.27
SRSF3-206ENST00000620242 ZNF652Q9Y2D9 606 aa16.71■□□□□ 0.27
SRSF3-206ENST00000620242 LRP5O75197 1615 aa16.7■□□□□ 0.26
SRSF3-206ENST00000620242 MYH14Q7Z406 1995 aaKnown RBP16.7■□□□□ 0.26
SRSF3-206ENST00000620242 LAMB4A4D0S4 1761 aa16.7■□□□□ 0.26
SRSF3-206ENST00000620242 DUSP27Q5VZP5 1158 aa16.7■□□□□ 0.26
SRSF3-206ENST00000620242 ZNF330Q9Y3S2 320 aaPredicted RBP16.7■□□□□ 0.26
SRSF3-206ENST00000620242 USP42Q9H9J4 1324 aaKnown RBP16.7■□□□□ 0.26
SRSF3-206ENST00000620242 TUBGCP6Q96RT7 1819 aa16.69■□□□□ 0.26
SRSF3-206ENST00000620242 EIF2S2P20042 333 aaKnown RBP16.69■□□□□ 0.26
SRSF3-206ENST00000620242 HDGFL1Q5TGJ6 251 aa16.69■□□□□ 0.26
SRSF3-206ENST00000620242 CCDC30Q5VVM6 783 aa16.69■□□□□ 0.26
SRSF3-206ENST00000620242 CLEC4GQ6UXB4 293 aa16.69■□□□□ 0.26
SRSF3-206ENST00000620242 DBF4Q9UBU7 674 aaPredicted RBP16.69■□□□□ 0.26
SRSF3-206ENST00000620242 ATF5Q9Y2D1 282 aaPredicted RBP16.69■□□□□ 0.26
SRSF3-206ENST00000620242 ZNF521Q96K83 1311 aa16.69■□□□□ 0.26
SRSF3-206ENST00000620242 KIF6Q6ZMV9 814 aa16.68■□□□□ 0.26
SRSF3-206ENST00000620242 DZIP3Q86Y13 1208 aaKnown RBP16.68■□□□□ 0.26
SRSF3-206ENST00000620242 ARXQ96QS3 562 aa16.68■□□□□ 0.26
SRSF3-206ENST00000620242 DDX21Q9NR30 783 aaKnown RBP eCLIP16.68■□□□□ 0.26
SRSF3-206ENST00000620242 PRAMEF22A3QJZ6 481 aa16.67■□□□□ 0.26
SRSF3-206ENST00000620242 GYS1P13807 737 aa16.67■□□□□ 0.26
SRSF3-206ENST00000620242 PDGFDQ9GZP0 370 aaPredicted RBP16.67■□□□□ 0.26
SRSF3-206ENST00000620242 HYPKQ9NX55 129 aa16.67■□□□□ 0.26
SRSF3-206ENST00000620242 FANCIQ9NVI1 1328 aa16.67■□□□□ 0.26
SRSF3-206ENST00000620242 ERVV-1B6SEH8 477 aa16.66■□□□□ 0.26
SRSF3-206ENST00000620242 TWISTNBQ3B726 338 aaPredicted RBP16.66■□□□□ 0.26
SRSF3-206ENST00000620242 AMIGO3Q86WK7 504 aa16.66■□□□□ 0.26
SRSF3-206ENST00000620242 STK31Q9BXU1 1019 aa16.66■□□□□ 0.26
SRSF3-206ENST00000620242 PARP3Q9Y6F1 533 aa16.66■□□□□ 0.26
SRSF3-206ENST00000620242 PTGER2P43116 358 aa16.65■□□□□ 0.26
SRSF3-206ENST00000620242 USPL1Q5W0Q7 1092 aa16.65■□□□□ 0.26
SRSF3-206ENST00000620242 TSR2Q969E8 191 aaKnown RBP16.65■□□□□ 0.26
SRSF3-206ENST00000620242 ZNF428Q96B54 188 aa16.65■□□□□ 0.26
SRSF3-206ENST00000620242 SGIP1Q9BQI5 828 aa16.65■□□□□ 0.26
SRSF3-206ENST00000620242 NBPF26B4DH59 902 aa16.64■□□□□ 0.25
SRSF3-206ENST00000620242 HNRNPUQ00839 825 aaKnown RBP eCLIP16.64■□□□□ 0.25
SRSF3-206ENST00000620242 NBPF10Q6P3W6 841 aaKnown RBP16.64■□□□□ 0.25
SRSF3-206ENST00000620242 NBPF15Q8N660 670 aa16.64■□□□□ 0.25
SRSF3-206ENST00000620242 CT47B1P0C2W7 299 aaPredicted RBP16.63■□□□□ 0.25
SRSF3-206ENST00000620242 MYL6BP14649 208 aa16.63■□□□□ 0.25
SRSF3-206ENST00000620242 HSP90AB3PQ58FF7 597 aa16.63■□□□□ 0.25
SRSF3-206ENST00000620242 MSL1Q68DK7 614 aa16.63■□□□□ 0.25
SRSF3-206ENST00000620242 C8orf58Q8NAV2 365 aa16.63■□□□□ 0.25
SRSF3-206ENST00000620242 TBC1D2BQ9UPU7 963 aa16.63■□□□□ 0.25
SRSF3-206ENST00000620242 SENP3-EIF4A1A0A087X0R7 540 aa16.62■□□□□ 0.25
SRSF3-206ENST00000620242 DDX58O95786 925 aaKnown RBP16.62■□□□□ 0.25
SRSF3-206ENST00000620242 MMP10P09238 476 aa16.62■□□□□ 0.25
SRSF3-206ENST00000620242 SETDB2Q96T68 719 aa16.62■□□□□ 0.25
SRSF3-206ENST00000620242 SRP68Q9UHB9 627 aaKnown RBP16.62■□□□□ 0.25
SRSF3-206ENST00000620242 MAP3K15Q6ZN16 1313 aa16.62■□□□□ 0.25
SRSF3-206ENST00000620242 C4AP0C0L4 1744 aa16.62■□□□□ 0.25
SRSF3-206ENST00000620242 COL24A1Q17RW2 1714 aa16.62■□□□□ 0.25
SRSF3-206ENST00000620242 ELL2O00472 640 aaPredicted RBP16.61■□□□□ 0.25
SRSF3-206ENST00000620242 CAMTA2O94983 1202 aa16.61■□□□□ 0.25
SRSF3-206ENST00000620242 SLFN5Q08AF3 891 aa16.61■□□□□ 0.25
SRSF3-206ENST00000620242 FKBP8Q14318 412 aa16.61■□□□□ 0.25
SRSF3-206ENST00000620242 KRT24Q2M2I5 525 aa16.61■□□□□ 0.25
SRSF3-206ENST00000620242 SMIM5Q71RC9 77 aa16.61■□□□□ 0.25
SRSF3-206ENST00000620242 CHPF2Q9P2E5 772 aa16.61■□□□□ 0.25
SRSF3-206ENST00000620242 CD2APQ9Y5K6 639 aa16.61■□□□□ 0.25
SRSF3-206ENST00000620242 DCAF8L1A6NGE4 600 aa16.6■□□□□ 0.25
SRSF3-206ENST00000620242 TM4SF1P30408 202 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms