RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 RIPPLY1Q0D2K3 151 aa3.59□□□□□ -1.83
NEB-220ENST00000618972 DDX46Q7L014 1031 aaKnown RBP3.59□□□□□ -1.83
NEB-220ENST00000618972 NOL10Q9BSC4 688 aaKnown RBP3.59□□□□□ -1.83
NEB-220ENST00000618972 HSP90AA4PQ58FG1 418 aa3.59□□□□□ -1.83
NEB-220ENST00000618972 PROCA1Q8NCQ7 364 aaPredicted RBP3.59□□□□□ -1.83
NEB-220ENST00000618972 ARHGAP35Q9NRY4 1499 aa3.59□□□□□ -1.83
NEB-220ENST00000618972 CT47A1Q5JQC4 288 aaPredicted RBP3.59□□□□□ -1.83
NEB-220ENST00000618972 ARFGAP3Q9NP61 516 aa3.59□□□□□ -1.83
NEB-220ENST00000618972 LRRFIP2Q9Y608 721 aaKnown RBP3.59□□□□□ -1.83
NEB-220ENST00000618972 LARGE1O95461 756 aa3.59□□□□□ -1.83
NEB-220ENST00000618972 CTAGE5O15320 804 aa3.59□□□□□ -1.83
NEB-220ENST00000618972 HOOK3Q86VS8 718 aa3.59□□□□□ -1.83
NEB-220ENST00000618972 CEP164Q9UPV0 1460 aa3.59□□□□□ -1.83
NEB-220ENST00000618972 IL13P35225 146 aa3.59□□□□□ -1.83
NEB-220ENST00000618972 PIBF1Q8WXW3 757 aa3.59□□□□□ -1.83
NEB-220ENST00000618972 CCDC94Q9BW85 323 aaPredicted RBP3.59□□□□□ -1.83
NEB-220ENST00000618972 PEX19P40855 299 aa3.59□□□□□ -1.83
NEB-220ENST00000618972 SF3A3Q12874 501 aaKnown RBP eCLIP3.59□□□□□ -1.83
NEB-220ENST00000618972 SMARCE1Q969G3 411 aa3.59□□□□□ -1.83
NEB-220ENST00000618972 FAM227BQ96M60 508 aa3.59□□□□□ -1.83
NEB-220ENST00000618972 PDRG1Q9NUG6 133 aa3.59□□□□□ -1.83
NEB-220ENST00000618972 ERICH4A6NGS2 130 aa3.59□□□□□ -1.83
NEB-220ENST00000618972 HCLS1P14317 486 aaPredicted RBP3.59□□□□□ -1.83
NEB-220ENST00000618972 CEP57Q86XR8 500 aa3.59□□□□□ -1.83
NEB-220ENST00000618972 ZSWIM4Q9H7M6 989 aa3.59□□□□□ -1.83
NEB-220ENST00000618972 MAP2K1Q02750 393 aaPredicted RBP3.59□□□□□ -1.83
NEB-220ENST00000618972 SEPT7Q16181 437 aaKnown RBP3.59□□□□□ -1.83
NEB-220ENST00000618972 FAM114A1Q8IWE2 563 aa3.59□□□□□ -1.83
NEB-220ENST00000618972 LRRCC1Q9C099 1032 aa3.59□□□□□ -1.83
NEB-220ENST00000618972 ZBTB17Q13105 803 aa3.59□□□□□ -1.83
NEB-220ENST00000618972 ANKS4BQ8N8V4 417 aa3.59□□□□□ -1.83
NEB-220ENST00000618972 ENOX2Q16206 610 aaKnown RBP3.59□□□□□ -1.84
NEB-220ENST00000618972 DDX19BQ9UMR2 479 aa3.59□□□□□ -1.84
NEB-220ENST00000618972 CADPSQ9ULU8 1353 aa3.59□□□□□ -1.84
NEB-220ENST00000618972 MTHFSDQ2M296 383 aaKnown RBP3.59□□□□□ -1.84
NEB-220ENST00000618972 ADCK5Q3MIX3 580 aa3.59□□□□□ -1.84
NEB-220ENST00000618972 TCP11Q8WWU5 503 aa3.59□□□□□ -1.84
NEB-220ENST00000618972 FIBPO43427 364 aa3.59□□□□□ -1.84
NEB-220ENST00000618972 SYNE4Q8N205 404 aa3.59□□□□□ -1.84
NEB-220ENST00000618972 JMYQ8N9B5 988 aa3.59□□□□□ -1.84
NEB-220ENST00000618972 SPATA31E1Q6ZUB1 1445 aa3.59□□□□□ -1.84
NEB-220ENST00000618972 KIF5BP33176 963 aa3.59□□□□□ -1.84
NEB-220ENST00000618972 GSDMDP57764 484 aa3.59□□□□□ -1.84
NEB-220ENST00000618972 TRIM5Q9C035 493 aa3.59□□□□□ -1.84
NEB-220ENST00000618972 ERC2O15083 957 aa3.59□□□□□ -1.84
NEB-220ENST00000618972 SLC39A6Q13433 755 aa3.59□□□□□ -1.84
NEB-220ENST00000618972 ZNF396Q96N95 335 aaPredicted RBP3.59□□□□□ -1.84
NEB-220ENST00000618972 TUBB6Q9BUF5 446 aa3.59□□□□□ -1.84
NEB-220ENST00000618972 RASSF4Q9H2L5 321 aa3.59□□□□□ -1.84
NEB-220ENST00000618972 LRPPRCP42704 1394 aaKnown RBP3.58□□□□□ -1.84
NEB-220ENST00000618972 CBFA2T2O43439 604 aa3.58□□□□□ -1.84
NEB-220ENST00000618972 PPP1R42Q7Z4L9 355 aa3.58□□□□□ -1.84
NEB-220ENST00000618972 MAP3K1Q13233 1512 aa3.58□□□□□ -1.84
NEB-220ENST00000618972 TERF2IPQ9NYB0 399 aa3.58□□□□□ -1.84
NEB-220ENST00000618972 ATP5J2-PTCD1G3V325 749 aa3.58□□□□□ -1.84
NEB-220ENST00000618972 PTCD1O75127 700 aaKnown RBP3.58□□□□□ -1.84
NEB-220ENST00000618972 FAM177A1Q8N128 213 aaPredicted RBP3.58□□□□□ -1.84
NEB-220ENST00000618972 GEMIN8Q9NWZ8 242 aaKnown RBP3.58□□□□□ -1.84
NEB-220ENST00000618972 A0A1B0GUL7 405 aa3.58□□□□□ -1.84
NEB-220ENST00000618972 PPP1R12BO60237 982 aaPredicted RBP3.58□□□□□ -1.84
NEB-220ENST00000618972 RASSF2P50749 326 aa3.58□□□□□ -1.84
NEB-220ENST00000618972 FAM210AQ96ND0 272 aa3.58□□□□□ -1.84
NEB-220ENST00000618972 CCDC172P0C7W6 258 aa3.58□□□□□ -1.84
NEB-220ENST00000618972 NKX2-3Q8TAU0 364 aa3.58□□□□□ -1.84
NEB-220ENST00000618972 FCHSD2O94868 740 aa3.58□□□□□ -1.84
NEB-220ENST00000618972 DAAM2Q86T65 1068 aa3.58□□□□□ -1.84
NEB-220ENST00000618972 PROSER3Q2NL68 480 aa3.58□□□□□ -1.84
NEB-220ENST00000618972 FKBP15Q5T1M5 1219 aa3.58□□□□□ -1.84
NEB-220ENST00000618972 IFT57Q9NWB7 429 aa3.58□□□□□ -1.84
NEB-220ENST00000618972 TSPYL4Q9UJ04 414 aa3.58□□□□□ -1.84
NEB-220ENST00000618972 CCDC6Q16204 474 aa3.58□□□□□ -1.84
NEB-220ENST00000618972 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.58□□□□□ -1.84
NEB-220ENST00000618972 CROCCP2Q86T23 111 aa3.58□□□□□ -1.84
NEB-220ENST00000618972 JAKMIP1Q96N16 626 aaKnown RBP3.58□□□□□ -1.84
NEB-220ENST00000618972 USP27XA6NNY8 438 aa3.58□□□□□ -1.84
NEB-220ENST00000618972 TIMM10P62072 90 aa3.58□□□□□ -1.84
NEB-220ENST00000618972 DNAJC25Q9H1X3 360 aa3.58□□□□□ -1.84
NEB-220ENST00000618972 UTP14AQ9BVJ6 771 aaKnown RBP3.58□□□□□ -1.84
NEB-220ENST00000618972 BRMS1Q9HCU9 246 aa3.58□□□□□ -1.84
NEB-220ENST00000618972 CNTLNQ9NXG0 1405 aa3.58□□□□□ -1.84
NEB-220ENST00000618972 NUDT16Q96DE0 195 aaKnown RBP3.58□□□□□ -1.84
NEB-220ENST00000618972 RBAK-RBAKDNI3L0D1 243 aa3.58□□□□□ -1.84
NEB-220ENST00000618972 IMMTQ16891 758 aaKnown RBP3.58□□□□□ -1.84
NEB-220ENST00000618972 HMGB2P26583 209 aaKnown RBP3.58□□□□□ -1.84
NEB-220ENST00000618972 WDR78Q5VTH9 848 aa3.58□□□□□ -1.84
NEB-220ENST00000618972 POLR3DP05423 398 aaPredicted RBP3.58□□□□□ -1.84
NEB-220ENST00000618972 NCOA5Q9HCD5 579 aaKnown RBP3.58□□□□□ -1.84
NEB-220ENST00000618972 DBN1Q16643 649 aa3.57□□□□□ -1.84
NEB-220ENST00000618972 MPRIPQ6WCQ1 1025 aa3.57□□□□□ -1.84
NEB-220ENST00000618972 CNPY4Q8N129 248 aa3.57□□□□□ -1.84
NEB-220ENST00000618972 CPLX3Q8WVH0 158 aa3.57□□□□□ -1.84
NEB-220ENST00000618972 DDX17Q92841 729 aaKnown RBP3.57□□□□□ -1.84
NEB-220ENST00000618972 NUB1Q9Y5A7 615 aa3.57□□□□□ -1.84
NEB-220ENST00000618972 XBP1P17861 261 aa3.57□□□□□ -1.84
NEB-220ENST00000618972 NBPF20Q3BBV1 942 aa3.57□□□□□ -1.84
NEB-220ENST00000618972 LARP1BQ659C4 914 aaKnown RBP3.57□□□□□ -1.84
NEB-220ENST00000618972 USP44Q9H0E7 712 aa3.57□□□□□ -1.84
NEB-220ENST00000618972 WDR33Q9C0J8 1336 aaKnown RBP3.57□□□□□ -1.84
NEB-220ENST00000618972 MAFGO15525 162 aa3.57□□□□□ -1.84
NEB-220ENST00000618972 CETN2P41208 172 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms