RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 HSPA1LP34931 641 aa21.89■■□□□ 1.1
CNOT3-209ENST00000617930 C5P01031 1676 aa21.89■■□□□ 1.09
CNOT3-209ENST00000617930 HOXB7P09629 217 aa21.89■■□□□ 1.09
CNOT3-209ENST00000617930 DDX54Q8TDD1 881 aaKnown RBP21.89■■□□□ 1.09
CNOT3-209ENST00000617930 GIGYF1O75420 1035 aaPredicted RBP21.88■■□□□ 1.09
CNOT3-209ENST00000617930 NKX1-1Q15270 411 aaPredicted RBP21.87■■□□□ 1.09
CNOT3-209ENST00000617930 C16orf71Q8IYS4 520 aaPredicted RBP21.87■■□□□ 1.09
CNOT3-209ENST00000617930 SPATA31A1Q5TZJ5 1347 aa21.87■■□□□ 1.09
CNOT3-209ENST00000617930 BCL9LQ86UU0 1499 aa21.86■■□□□ 1.09
CNOT3-209ENST00000617930 PROSER3Q2NL68 480 aa21.85■■□□□ 1.09
CNOT3-209ENST00000617930 USP44Q9H0E7 712 aa21.85■■□□□ 1.09
CNOT3-209ENST00000617930 ZNF790Q6PG37 636 aa21.85■■□□□ 1.09
CNOT3-209ENST00000617930 OTUD7AQ8TE49 926 aaPredicted RBP21.84■■□□□ 1.09
CNOT3-209ENST00000617930 TBC1D32Q96NH3 1257 aa21.84■■□□□ 1.09
CNOT3-209ENST00000617930 C8orf37Q96NL8 207 aa21.84■■□□□ 1.09
CNOT3-209ENST00000617930 SPATA31A5Q5VU36 1347 aa21.83■■□□□ 1.09
CNOT3-209ENST00000617930 SPATA31A7Q8IWB4 1347 aa21.83■■□□□ 1.09
CNOT3-209ENST00000617930 SMARCA5O60264 1052 aaPredicted RBP21.83■■□□□ 1.09
CNOT3-209ENST00000617930 HSP90AB1P08238 724 aaKnown RBP21.83■■□□□ 1.09
CNOT3-209ENST00000617930 PLEKHM2Q8IWE5 1019 aa21.83■■□□□ 1.09
CNOT3-209ENST00000617930 PAPPAQ13219 1627 aa21.83■■□□□ 1.08
CNOT3-209ENST00000617930 GNAI2P04899 355 aa21.82■■□□□ 1.08
CNOT3-209ENST00000617930 BMP2KLQ5H9B9 411 aa21.82■■□□□ 1.08
CNOT3-209ENST00000617930 ZNF496Q96IT1 587 aaPredicted RBP21.82■■□□□ 1.08
CNOT3-209ENST00000617930 PXDNLA1KZ92 1463 aa21.81■■□□□ 1.08
CNOT3-209ENST00000617930 ADCY9O60503 1353 aa21.81■■□□□ 1.08
CNOT3-209ENST00000617930 CACNA1FO60840 1977 aa21.81■■□□□ 1.08
CNOT3-209ENST00000617930 PNMA6EA0A0J9YXQ4 647 aa21.81■■□□□ 1.08
CNOT3-209ENST00000617930 PI4KAP2A4QPH2 592 aa21.81■■□□□ 1.08
CNOT3-209ENST00000617930 CABP4P57796 275 aa21.81■■□□□ 1.08
CNOT3-209ENST00000617930 PI4KAP1Q8N8J0 262 aa21.81■■□□□ 1.08
CNOT3-209ENST00000617930 GSPT1P15170 499 aaKnown RBP21.8■■□□□ 1.08
CNOT3-209ENST00000617930 UBR2Q8IWV8 1755 aa21.8■■□□□ 1.08
CNOT3-209ENST00000617930 TNS2Q63HR2 1409 aa21.8■■□□□ 1.08
CNOT3-209ENST00000617930 APBB1O00213 710 aa21.8■■□□□ 1.08
CNOT3-209ENST00000617930 PDIA6Q15084 440 aa21.8■■□□□ 1.08
CNOT3-209ENST00000617930 BEND3Q5T5X7 828 aa21.8■■□□□ 1.08
CNOT3-209ENST00000617930 ITGB4P16144 1822 aa21.79■■□□□ 1.08
CNOT3-209ENST00000617930 LRRFIP2Q9Y608 721 aaKnown RBP21.79■■□□□ 1.08
CNOT3-209ENST00000617930 KCPQ6ZWJ8 1503 aa21.79■■□□□ 1.08
CNOT3-209ENST00000617930 UNC5CLQ8IV45 518 aa21.79■■□□□ 1.08
CNOT3-209ENST00000617930 DBF4Q9UBU7 674 aaPredicted RBP21.79■■□□□ 1.08
CNOT3-209ENST00000617930 SPATA31A6Q5VVP1 1343 aa21.78■■□□□ 1.08
CNOT3-209ENST00000617930 GNAI3P08754 354 aa21.78■■□□□ 1.08
CNOT3-209ENST00000617930 MFAP1P55081 439 aaKnown RBP21.78■■□□□ 1.08
CNOT3-209ENST00000617930 N4BP2Q86UW6 1770 aaPredicted RBP21.78■■□□□ 1.08
CNOT3-209ENST00000617930 ERVV-2B6SEH9 535 aa21.77■■□□□ 1.08
CNOT3-209ENST00000617930 ATP8B2P98198 1209 aa21.77■■□□□ 1.08
CNOT3-209ENST00000617930 FNBP4Q8N3X1 1017 aaPredicted RBP21.77■■□□□ 1.08
CNOT3-209ENST00000617930 NGLY1Q96IV0 654 aa21.77■■□□□ 1.08
CNOT3-209ENST00000617930 NBPF7P0C2Y1 421 aaPredicted RBP21.77■■□□□ 1.07
CNOT3-209ENST00000617930 DNAAF4Q8WXU2 420 aa21.77■■□□□ 1.07
CNOT3-209ENST00000617930 EXOC6BQ9Y2D4 811 aa21.76■■□□□ 1.07
CNOT3-209ENST00000617930 SRCIN1Q9C0H9 1055 aa21.75■■□□□ 1.07
CNOT3-209ENST00000617930 USP16Q9Y5T5 823 aa21.75■■□□□ 1.07
CNOT3-209ENST00000617930 DOT1LQ8TEK3 1739 aa21.74■■□□□ 1.07
CNOT3-209ENST00000617930 THRAP3Q9Y2W1 955 aaKnown RBP21.74■■□□□ 1.07
CNOT3-209ENST00000617930 EXOC5O00471 708 aa21.73■■□□□ 1.07
CNOT3-209ENST00000617930 HMMRO75330 724 aa21.73■■□□□ 1.07
CNOT3-209ENST00000617930 CCDC9Q9Y3X0 531 aaKnown RBP21.73■■□□□ 1.07
CNOT3-209ENST00000617930 PIGBQ92521 554 aa21.73■■□□□ 1.07
CNOT3-209ENST00000617930 C22orf23Q9BZE7 217 aa21.73■■□□□ 1.07
CNOT3-209ENST00000617930 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.73■■□□□ 1.07
CNOT3-209ENST00000617930 UBTFL1P0CB47 393 aaPredicted RBP21.72■■□□□ 1.07
CNOT3-209ENST00000617930 VPS72Q15906 364 aa21.72■■□□□ 1.07
CNOT3-209ENST00000617930 TTC22Q5TAA0 569 aa21.72■■□□□ 1.07
CNOT3-209ENST00000617930 TBC1D9Q6ZT07 1266 aa21.72■■□□□ 1.07
CNOT3-209ENST00000617930 BARGINQ6ZT62 677 aa21.72■■□□□ 1.07
CNOT3-209ENST00000617930 MARCH10Q8NA82 808 aaPredicted RBP21.72■■□□□ 1.07
CNOT3-209ENST00000617930 UPF2Q9HAU5 1272 aaKnown RBP21.72■■□□□ 1.07
CNOT3-209ENST00000617930 MAP3K2Q9Y2U5 619 aa21.72■■□□□ 1.07
CNOT3-209ENST00000617930 LAMB4A4D0S4 1761 aa21.72■■□□□ 1.07
CNOT3-209ENST00000617930 PIP4K2AP48426 406 aaPredicted RBP21.72■■□□□ 1.07
CNOT3-209ENST00000617930 LRP10Q7Z4F1 713 aa21.71■■□□□ 1.07
CNOT3-209ENST00000617930 TTC5Q8N0Z6 440 aa21.71■■□□□ 1.07
CNOT3-209ENST00000617930 CHMP4AQ9BY43 222 aa21.71■■□□□ 1.07
CNOT3-209ENST00000617930 DDX21Q9NR30 783 aaKnown RBP eCLIP21.71■■□□□ 1.07
CNOT3-209ENST00000617930 NFKBIBQ15653 356 aa21.7■■□□□ 1.06
CNOT3-209ENST00000617930 FAM98CQ17RN3 349 aaKnown RBP21.7■■□□□ 1.06
CNOT3-209ENST00000617930 KSR2Q6VAB6 950 aa21.7■■□□□ 1.06
CNOT3-209ENST00000617930 ASAP1Q9ULH1 1129 aa21.7■■□□□ 1.06
CNOT3-209ENST00000617930 DDB1Q16531 1140 aa21.7■■□□□ 1.06
CNOT3-209ENST00000617930 SSH3Q8TE77 659 aa21.7■■□□□ 1.06
CNOT3-209ENST00000617930 FMNL2Q96PY5 1086 aa21.7■■□□□ 1.06
CNOT3-209ENST00000617930 CWF19L2Q2TBE0 894 aaKnown RBP21.69■■□□□ 1.06
CNOT3-209ENST00000617930 HYPKQ9NX55 129 aa21.69■■□□□ 1.06
CNOT3-209ENST00000617930 USP21Q9UK80 565 aa21.69■■□□□ 1.06
CNOT3-209ENST00000617930 SALL3Q9BXA9 1300 aa21.69■■□□□ 1.06
CNOT3-209ENST00000617930 BCL9O00512 1426 aa21.69■■□□□ 1.06
CNOT3-209ENST00000617930 KAT6BQ8WYB5 2073 aa21.69■■□□□ 1.06
CNOT3-209ENST00000617930 POLA2Q14181 598 aa21.68■■□□□ 1.06
CNOT3-209ENST00000617930 PPP1R42Q7Z4L9 355 aa21.68■■□□□ 1.06
CNOT3-209ENST00000617930 IBTKQ9P2D0 1353 aaPredicted RBP21.68■■□□□ 1.06
CNOT3-209ENST00000617930 PTCD1O75127 700 aaKnown RBP21.68■■□□□ 1.06
CNOT3-209ENST00000617930 SNRPA1P09661 255 aaKnown RBP21.68■■□□□ 1.06
CNOT3-209ENST00000617930 AIMP1Q12904 312 aaKnown RBP21.68■■□□□ 1.06
CNOT3-209ENST00000617930 CDCA7Q9BWT1 371 aaPredicted RBP21.68■■□□□ 1.06
CNOT3-209ENST00000617930 TMOD3Q9NYL9 352 aa21.68■■□□□ 1.06
CNOT3-209ENST00000617930 ATG3Q9NT62 314 aa21.67■■□□□ 1.06
CNOT3-209ENST00000617930 MYL6BP14649 208 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms