RNA–Protein interactions for RNA: ENST00000616944.4

CBWD1-225, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-225ENST00000616944 SLC4A2P04920 1241 aa19.41■□□□□ 0.7
CBWD1-225ENST00000616944 TRIM27P14373 513 aa19.41■□□□□ 0.7
CBWD1-225ENST00000616944 EIF2S2P20042 333 aaKnown RBP19.41■□□□□ 0.7
CBWD1-225ENST00000616944 PDE3AQ14432 1141 aa19.41■□□□□ 0.7
CBWD1-225ENST00000616944 CHPF2Q9P2E5 772 aa19.41■□□□□ 0.7
CBWD1-225ENST00000616944 USP16Q9Y5T5 823 aa19.41■□□□□ 0.7
CBWD1-225ENST00000616944 TAF1LQ8IZX4 1826 aa19.41■□□□□ 0.7
CBWD1-225ENST00000616944 PALLDQ8WX93 1383 aa19.4■□□□□ 0.7
CBWD1-225ENST00000616944 ATF7IPQ6VMQ6 1270 aa19.4■□□□□ 0.7
CBWD1-225ENST00000616944 FAM196AQ6ZSG2 479 aa19.4■□□□□ 0.7
CBWD1-225ENST00000616944 TNNQ9UQP3 1299 aa19.4■□□□□ 0.7
CBWD1-225ENST00000616944 FKBP8Q14318 412 aa19.4■□□□□ 0.7
CBWD1-225ENST00000616944 G2E3Q7L622 706 aa19.4■□□□□ 0.7
CBWD1-225ENST00000616944 DBF4Q9UBU7 674 aaPredicted RBP19.4■□□□□ 0.7
CBWD1-225ENST00000616944 MYH14Q7Z406 1995 aaKnown RBP19.39■□□□□ 0.7
CBWD1-225ENST00000616944 TNS1Q9HBL0 1735 aaKnown RBP19.39■□□□□ 0.7
CBWD1-225ENST00000616944 PTPRCP08575 1304 aa19.39■□□□□ 0.69
CBWD1-225ENST00000616944 IPO8O15397 1037 aaKnown RBP19.39■□□□□ 0.69
CBWD1-225ENST00000616944 CANXP27824 592 aaKnown RBP19.39■□□□□ 0.69
CBWD1-225ENST00000616944 PDIA6Q15084 440 aa19.39■□□□□ 0.69
CBWD1-225ENST00000616944 ERBB4Q15303 1308 aa19.38■□□□□ 0.69
CBWD1-225ENST00000616944 RLBP1P12271 317 aa19.38■□□□□ 0.69
CBWD1-225ENST00000616944 SMARCC1Q92922 1105 aaPredicted RBP19.38■□□□□ 0.69
CBWD1-225ENST00000616944 PROSER3Q2NL68 480 aa19.37■□□□□ 0.69
CBWD1-225ENST00000616944 LRP10Q7Z4F1 713 aa19.37■□□□□ 0.69
CBWD1-225ENST00000616944 RBM42Q9BTD8 480 aaKnown RBP19.37■□□□□ 0.69
CBWD1-225ENST00000616944 DDX21Q9NR30 783 aaKnown RBP eCLIP19.37■□□□□ 0.69
CBWD1-225ENST00000616944 ABCC4O15439 1325 aa19.37■□□□□ 0.69
CBWD1-225ENST00000616944 FLIIQ13045 1269 aa19.36■□□□□ 0.69
CBWD1-225ENST00000616944 TEX13AQ9BXU3 409 aaPredicted RBP19.36■□□□□ 0.69
CBWD1-225ENST00000616944 BCL11BQ9C0K0 894 aaPredicted RBP19.36■□□□□ 0.69
CBWD1-225ENST00000616944 NUP188Q5SRE5 1749 aa19.36■□□□□ 0.69
CBWD1-225ENST00000616944 LOC102724428A0A0B4J2F2 783 aa19.36■□□□□ 0.69
CBWD1-225ENST00000616944 ANXA1P04083 346 aa19.36■□□□□ 0.69
CBWD1-225ENST00000616944 SIK1P57059 783 aa19.36■□□□□ 0.69
CBWD1-225ENST00000616944 DNAJC10Q8IXB1 793 aa19.36■□□□□ 0.69
CBWD1-225ENST00000616944 PANK1Q8TE04 598 aa19.36■□□□□ 0.69
CBWD1-225ENST00000616944 ARFGEF2Q9Y6D5 1785 aa19.35■□□□□ 0.69
CBWD1-225ENST00000616944 ERICH6BQ5W0A0 696 aa19.35■□□□□ 0.69
CBWD1-225ENST00000616944 DZIP1LQ8IYY4 767 aaKnown RBP19.35■□□□□ 0.69
CBWD1-225ENST00000616944 CLUAP1Q96AJ1 413 aa19.35■□□□□ 0.69
CBWD1-225ENST00000616944 PHAXQ9H814 394 aaKnown RBP19.35■□□□□ 0.69
CBWD1-225ENST00000616944 PXDNLA1KZ92 1463 aa19.34■□□□□ 0.69
CBWD1-225ENST00000616944 RGPD3A6NKT7 1758 aaPredicted RBP19.34■□□□□ 0.69
CBWD1-225ENST00000616944 RGPD4Q7Z3J3 1758 aa19.34■□□□□ 0.69
CBWD1-225ENST00000616944 MS4A1P11836 297 aa19.34■□□□□ 0.69
CBWD1-225ENST00000616944 API5Q9BZZ5 524 aaKnown RBP19.34■□□□□ 0.69
CBWD1-225ENST00000616944 HYPKQ9NX55 129 aa19.34■□□□□ 0.69
CBWD1-225ENST00000616944 NBPF26B4DH59 902 aa19.33■□□□□ 0.69
CBWD1-225ENST00000616944 SOCS7O14512 581 aa19.33■□□□□ 0.69
CBWD1-225ENST00000616944 NBPF14Q5TI25 921 aa19.33■□□□□ 0.69
CBWD1-225ENST00000616944 NBPF10Q6P3W6 841 aaKnown RBP19.33■□□□□ 0.69
CBWD1-225ENST00000616944 NBPF15Q8N660 670 aa19.33■□□□□ 0.69
CBWD1-225ENST00000616944 CRBNQ96SW2 442 aa19.33■□□□□ 0.69
CBWD1-225ENST00000616944 CYP19A1P11511 503 aaPredicted RBP19.33■□□□□ 0.68
CBWD1-225ENST00000616944 ITPK1Q13572 414 aa19.32■□□□□ 0.68
CBWD1-225ENST00000616944 FTSJ3Q8IY81 847 aaKnown RBP19.32■□□□□ 0.68
CBWD1-225ENST00000616944 EXOC6Q8TAG9 804 aa19.32■□□□□ 0.68
CBWD1-225ENST00000616944 STARD3NLO95772 234 aa19.31■□□□□ 0.68
CBWD1-225ENST00000616944 A1BGP04217 495 aa19.31■□□□□ 0.68
CBWD1-225ENST00000616944 ATP6V1AP38606 617 aa19.31■□□□□ 0.68
CBWD1-225ENST00000616944 ADCY9O60503 1353 aa19.3■□□□□ 0.68
CBWD1-225ENST00000616944 TRIM37O94972 964 aa19.3■□□□□ 0.68
CBWD1-225ENST00000616944 PIP4K2AP48426 406 aaPredicted RBP19.3■□□□□ 0.68
CBWD1-225ENST00000616944 FKBP5Q13451 457 aaPredicted RBP19.3■□□□□ 0.68
CBWD1-225ENST00000616944 TMEM57Q8N5G2 664 aa19.3■□□□□ 0.68
CBWD1-225ENST00000616944 COG6Q9Y2V7 657 aa19.3■□□□□ 0.68
CBWD1-225ENST00000616944 MVPQ14764 893 aaKnown RBP19.29■□□□□ 0.68
CBWD1-225ENST00000616944 UPF1Q92900 1129 aaKnown RBP eCLIP19.29■□□□□ 0.68
CBWD1-225ENST00000616944 MYL6BP14649 208 aa19.29■□□□□ 0.68
CBWD1-225ENST00000616944 C4BP0C0L5 1744 aa19.28■□□□□ 0.68
CBWD1-225ENST00000616944 F6X3S4 739 aa19.28■□□□□ 0.68
CBWD1-225ENST00000616944 INTS3Q68E01 1043 aaKnown RBP19.28■□□□□ 0.68
CBWD1-225ENST00000616944 AFDNP55196 1824 aaKnown RBP19.27■□□□□ 0.68
CBWD1-225ENST00000616944 ATP10DQ9P241 1426 aa19.26■□□□□ 0.67
CBWD1-225ENST00000616944 COPS6Q7L5N1 327 aa19.26■□□□□ 0.67
CBWD1-225ENST00000616944 XAGE3Q8WTP9 111 aa19.26■□□□□ 0.67
CBWD1-225ENST00000616944 ZBTB1Q9Y2K1 713 aa19.26■□□□□ 0.67
CBWD1-225ENST00000616944 ANKRD36CQ5JPF3 1778 aa19.26■□□□□ 0.67
CBWD1-225ENST00000616944 NUP98P52948 1817 aa19.26■□□□□ 0.67
CBWD1-225ENST00000616944 PI4KAP2A4QPH2 592 aa19.25■□□□□ 0.67
CBWD1-225ENST00000616944 CRKLP46109 303 aaKnown RBP19.25■□□□□ 0.67
CBWD1-225ENST00000616944 INTS5Q6P9B9 1019 aaKnown RBP19.25■□□□□ 0.67
CBWD1-225ENST00000616944 PI4KAP1Q8N8J0 262 aa19.25■□□□□ 0.67
CBWD1-225ENST00000616944 LINC00116Q8NCU8 138 aa19.25■□□□□ 0.67
CBWD1-225ENST00000616944 BCORQ6W2J9 1755 aa19.25■□□□□ 0.67
CBWD1-225ENST00000616944 UBR3Q6ZT12 1888 aa19.25■□□□□ 0.67
CBWD1-225ENST00000616944 KSR2Q6VAB6 950 aa19.25■□□□□ 0.67
CBWD1-225ENST00000616944 ITPRIPQ8IWB1 547 aa19.25■□□□□ 0.67
CBWD1-225ENST00000616944 CCDC87Q9NVE4 849 aa19.25■□□□□ 0.67
CBWD1-225ENST00000616944 DDX19BQ9UMR2 479 aa19.25■□□□□ 0.67
CBWD1-225ENST00000616944 CNTNAP4Q9C0A0 1308 aa19.25■□□□□ 0.67
CBWD1-225ENST00000616944 DNAAF4Q8WXU2 420 aa19.24■□□□□ 0.67
CBWD1-225ENST00000616944 CCNL1Q9UK58 526 aaPredicted RBP19.24■□□□□ 0.67
CBWD1-225ENST00000616944 DDX58O95786 925 aaKnown RBP19.23■□□□□ 0.67
CBWD1-225ENST00000616944 IL6STP40189 918 aaPredicted RBP19.23■□□□□ 0.67
CBWD1-225ENST00000616944 KCNQ4P56696 695 aa19.23■□□□□ 0.67
CBWD1-225ENST00000616944 AIMP1Q12904 312 aaKnown RBP19.23■□□□□ 0.67
CBWD1-225ENST00000616944 C4AP0C0L4 1744 aa19.23■□□□□ 0.67
CBWD1-225ENST00000616944 PLSCR1O15162 318 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms