RNA–Protein interactions for RNA: ENST00000616803.4

CBWD1-224, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-224ENST00000616803 IGF1RP08069 1367 aa7.38□□□□□ -1.23
CBWD1-224ENST00000616803 PSME1Q06323 249 aa7.38□□□□□ -1.23
CBWD1-224ENST00000616803 CRTC2Q53ET0 693 aaPredicted RBP7.38□□□□□ -1.23
CBWD1-224ENST00000616803 CDCA8Q53HL2 280 aa7.38□□□□□ -1.23
CBWD1-224ENST00000616803 CFAP70Q5T0N1 1121 aa7.38□□□□□ -1.23
CBWD1-224ENST00000616803 AIDAQ96BJ3 306 aa7.38□□□□□ -1.23
CBWD1-224ENST00000616803 ZNF594Q96JF6 807 aaPredicted RBP7.38□□□□□ -1.23
CBWD1-224ENST00000616803 CALR3Q96L12 384 aaKnown RBP7.38□□□□□ -1.23
CBWD1-224ENST00000616803 C21orf2O43822 256 aa7.37□□□□□ -1.23
CBWD1-224ENST00000616803 LZTS3O60299 673 aaPredicted RBP7.37□□□□□ -1.23
CBWD1-224ENST00000616803 CELA2BP08218 269 aaPredicted RBP7.37□□□□□ -1.23
CBWD1-224ENST00000616803 CTBSQ01459 385 aa7.37□□□□□ -1.23
CBWD1-224ENST00000616803 GRIN2CQ14957 1233 aa7.37□□□□□ -1.23
CBWD1-224ENST00000616803 TSEN2Q8NCE0 465 aaKnown RBP7.37□□□□□ -1.23
CBWD1-224ENST00000616803 ACDQ96AP0 544 aa7.37□□□□□ -1.23
CBWD1-224ENST00000616803 ZIC5Q96T25 663 aa7.37□□□□□ -1.23
CBWD1-224ENST00000616803 TSPAN10Q9H1Z9 355 aaPredicted RBP7.37□□□□□ -1.23
CBWD1-224ENST00000616803 CABP1Q9NZU7 370 aa7.37□□□□□ -1.23
CBWD1-224ENST00000616803 IRS1P35568 1242 aa7.36□□□□□ -1.23
CBWD1-224ENST00000616803 SRSF11Q05519 484 aaKnown RBP7.36□□□□□ -1.23
CBWD1-224ENST00000616803 GPAT2Q6NUI2 795 aa7.36□□□□□ -1.23
CBWD1-224ENST00000616803 SLC9A9Q8IVB4 645 aa7.36□□□□□ -1.23
CBWD1-224ENST00000616803 ABHD17AQ96GS6 310 aa7.36□□□□□ -1.23
CBWD1-224ENST00000616803 NIFKQ9BYG3 293 aaKnown RBP7.36□□□□□ -1.23
CBWD1-224ENST00000616803 ZCCHC2Q9C0B9 1178 aaKnown RBP7.36□□□□□ -1.23
CBWD1-224ENST00000616803 H7C1W4 665 aa7.35□□□□□ -1.23
CBWD1-224ENST00000616803 LMOD1P29536 600 aaPredicted RBP7.35□□□□□ -1.23
CBWD1-224ENST00000616803 L3MBTL2Q969R5 705 aa7.35□□□□□ -1.23
CBWD1-224ENST00000616803 GMCL1Q96IK5 515 aa7.35□□□□□ -1.23
CBWD1-224ENST00000616803 CRISPLD1Q9H336 500 aa7.35□□□□□ -1.23
CBWD1-224ENST00000616803 STRN4Q9NRL3 753 aa7.35□□□□□ -1.23
CBWD1-224ENST00000616803 MBIPQ9NS73 344 aa7.35□□□□□ -1.23
CBWD1-224ENST00000616803 A0A1W2PNR3 127 aa7.34□□□□□ -1.23
CBWD1-224ENST00000616803 RASA1P20936 1047 aa7.34□□□□□ -1.23
CBWD1-224ENST00000616803 NOS2P35228 1153 aa7.34□□□□□ -1.23
CBWD1-224ENST00000616803 PTK7Q13308 1070 aa7.34□□□□□ -1.23
CBWD1-224ENST00000616803 SIX5Q8N196 739 aa7.34□□□□□ -1.23
CBWD1-224ENST00000616803 RFX1P22670 979 aa7.33□□□□□ -1.24
CBWD1-224ENST00000616803 MARSP56192 900 aaKnown RBP7.33□□□□□ -1.24
CBWD1-224ENST00000616803 TEAD4Q15561 434 aa7.33□□□□□ -1.24
CBWD1-224ENST00000616803 LARGE2Q8N3Y3 721 aa7.33□□□□□ -1.24
CBWD1-224ENST00000616803 ARXQ96QS3 562 aa7.33□□□□□ -1.24
CBWD1-224ENST00000616803 KLF15Q9UIH9 416 aa7.33□□□□□ -1.24
CBWD1-224ENST00000616803 HCN4Q9Y3Q4 1203 aa7.33□□□□□ -1.24
CBWD1-224ENST00000616803 EML1O00423 815 aa7.32□□□□□ -1.24
CBWD1-224ENST00000616803 BACH1O14867 736 aa7.32□□□□□ -1.24
CBWD1-224ENST00000616803 SRPK2P78362 688 aaKnown RBP7.32□□□□□ -1.24
CBWD1-224ENST00000616803 TRIM50Q86XT4 487 aa7.32□□□□□ -1.24
CBWD1-224ENST00000616803 CFHR5Q9BXR6 569 aa7.32□□□□□ -1.24
CBWD1-224ENST00000616803 MX2P20592 715 aa7.31□□□□□ -1.24
CBWD1-224ENST00000616803 GTF2E1P29083 439 aaPredicted RBP7.31□□□□□ -1.24
CBWD1-224ENST00000616803 TNP2Q05952 138 aa7.31□□□□□ -1.24
CBWD1-224ENST00000616803 DPYDQ12882 1025 aa7.31□□□□□ -1.24
CBWD1-224ENST00000616803 ZMYND15Q9H091 742 aa7.31□□□□□ -1.24
CBWD1-224ENST00000616803 GTF3C3Q9Y5Q9 886 aa7.31□□□□□ -1.24
CBWD1-224ENST00000616803 DNMT3AQ9Y6K1 912 aaPredicted RBP7.31□□□□□ -1.24
CBWD1-224ENST00000616803 DCDC2BA2VCK2 349 aa7.3□□□□□ -1.24
CBWD1-224ENST00000616803 SHISA8B8ZZ34 492 aa7.3□□□□□ -1.24
CBWD1-224ENST00000616803 ARSJQ5FYB0 599 aaPredicted RBP7.3□□□□□ -1.24
CBWD1-224ENST00000616803 POTEAQ6S8J7 498 aa7.3□□□□□ -1.24
CBWD1-224ENST00000616803 ZNF280CQ8ND82 737 aa7.3□□□□□ -1.24
CBWD1-224ENST00000616803 ARID3CA6NKF2 412 aa7.29□□□□□ -1.24
CBWD1-224ENST00000616803 CSB-PGBD3P0DP91 1061 aa7.29□□□□□ -1.24
CBWD1-224ENST00000616803 MAPTP10636 758 aaKnown RBP7.29□□□□□ -1.24
CBWD1-224ENST00000616803 ATP1A2P50993 1020 aa7.29□□□□□ -1.24
CBWD1-224ENST00000616803 MAP3K10Q02779 954 aa7.29□□□□□ -1.24
CBWD1-224ENST00000616803 FOXR1Q6PIV2 292 aa7.29□□□□□ -1.24
CBWD1-224ENST00000616803 PGBD3Q8N328 593 aa7.29□□□□□ -1.24
CBWD1-224ENST00000616803 TRERF1Q96PN7 1200 aa7.29□□□□□ -1.24
CBWD1-224ENST00000616803 ATAD2Q6PL18 1390 aa7.29□□□□□ -1.24
CBWD1-224ENST00000616803 CNTNAP5Q8WYK1 1306 aa7.28□□□□□ -1.24
CBWD1-224ENST00000616803 USP17L15C9J2P7 530 aa7.28□□□□□ -1.24
CBWD1-224ENST00000616803 USP17L10C9JJH3 530 aa7.28□□□□□ -1.24
CBWD1-224ENST00000616803 USP17L13C9JLJ4 530 aa7.28□□□□□ -1.24
CBWD1-224ENST00000616803 USP17L12C9JPN9 530 aa7.28□□□□□ -1.24
CBWD1-224ENST00000616803 USP17L11C9JVI0 530 aa7.28□□□□□ -1.24
CBWD1-224ENST00000616803 USP17L21D6R901 530 aa7.28□□□□□ -1.24
CBWD1-224ENST00000616803 USP17L18D6R9N7 530 aa7.28□□□□□ -1.24
CBWD1-224ENST00000616803 USP17L22D6RA61 530 aa7.28□□□□□ -1.24
CBWD1-224ENST00000616803 USP17L17D6RBQ6 530 aa7.28□□□□□ -1.24
CBWD1-224ENST00000616803 USP17L19D6RCP7 530 aa7.28□□□□□ -1.24
CBWD1-224ENST00000616803 USP17L20D6RJB6 530 aa7.28□□□□□ -1.24
CBWD1-224ENST00000616803 ATXN7O15265 892 aaPredicted RBP7.28□□□□□ -1.24
CBWD1-224ENST00000616803 HOXB4P17483 251 aaPredicted RBP7.28□□□□□ -1.24
CBWD1-224ENST00000616803 CD33P20138 364 aa7.28□□□□□ -1.24
CBWD1-224ENST00000616803 FGFR3P22607 806 aa7.28□□□□□ -1.24
CBWD1-224ENST00000616803 USP17L24Q0WX57 530 aa7.28□□□□□ -1.24
CBWD1-224ENST00000616803 EFHC2Q5JST6 749 aa7.28□□□□□ -1.24
CBWD1-224ENST00000616803 LRRC69Q6ZNQ3 347 aa7.28□□□□□ -1.24
CBWD1-224ENST00000616803 SCG3Q8WXD2 468 aaKnown RBP7.28□□□□□ -1.24
CBWD1-224ENST00000616803 VRTNQ9H8Y1 702 aa7.28□□□□□ -1.24
CBWD1-224ENST00000616803 ZDHHC3Q9NYG2 299 aa7.28□□□□□ -1.24
CBWD1-224ENST00000616803 PCDHGC4Q9Y5F7 938 aa7.28□□□□□ -1.24
CBWD1-224ENST00000616803 SERTM1A2A2V5 107 aa7.27□□□□□ -1.25
CBWD1-224ENST00000616803 M0R2N6 131 aa7.27□□□□□ -1.25
CBWD1-224ENST00000616803 BCRP11274 1271 aa7.27□□□□□ -1.25
CBWD1-224ENST00000616803 SEC13P55735 322 aa7.27□□□□□ -1.25
CBWD1-224ENST00000616803 SNRPNP63162 240 aaKnown RBP7.27□□□□□ -1.25
CBWD1-224ENST00000616803 KANK3Q6NY19 840 aa7.27□□□□□ -1.25
CBWD1-224ENST00000616803 NLRP8Q86W28 1048 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms