RNA–Protein interactions for RNA: ENST00000616352.4

ACACA-238, Transcript of acetyl-CoA carboxylase alpha, human

TSL 1 (best)

Gene ACACA, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACACA-238	ENST00000616352	NECTIN2	Q92692	538 aa		29.58	■■■□□ 2.33
ACACA-238	ENST00000616352	C4B	P0C0L5	1744 aa		29.58	■■■□□ 2.33
ACACA-238	ENST00000616352	SLC27A3	Q5K4L6	730 aa		29.57	■■■□□ 2.32
ACACA-238	ENST00000616352	KCNQ4	P56696	695 aa		29.56	■■■□□ 2.32
ACACA-238	ENST00000616352	CCDC125	Q86Z20	511 aa		29.56	■■■□□ 2.32
ACACA-238	ENST00000616352	LRRC4B	Q9NT99	713 aa		29.56	■■■□□ 2.32
ACACA-238	ENST00000616352	STARD3NL	O95772	234 aa		29.56	■■■□□ 2.32
ACACA-238	ENST00000616352	ILDR2	Q71H61	639 aa		29.56	■■■□□ 2.32
ACACA-238	ENST00000616352	TXNRD1	Q16881	649 aa		29.55	■■■□□ 2.32
ACACA-238	ENST00000616352	ERBB4	Q15303	1308 aa		29.54	■■■□□ 2.32
ACACA-238	ENST00000616352	TCERG1	O14776	1098 aa	Known RBP	29.54	■■■□□ 2.32
ACACA-238	ENST00000616352	LINC00116	Q8NCU8	138 aa		29.54	■■■□□ 2.32
ACACA-238	ENST00000616352	CHPF2	Q9P2E5	772 aa		29.54	■■■□□ 2.32
ACACA-238	ENST00000616352	SF3B2	Q13435	895 aa	Known RBP	29.53	■■■□□ 2.32
ACACA-238	ENST00000616352	PDIA6	Q15084	440 aa		29.53	■■■□□ 2.32
ACACA-238	ENST00000616352	BCL2L13	Q9BXK5	485 aa		29.53	■■■□□ 2.32
ACACA-238	ENST00000616352	BCAR3	O75815	825 aa		29.53	■■■□□ 2.32
ACACA-238	ENST00000616352	BRPF1	P55201	1214 aa	Predicted RBP	29.53	■■■□□ 2.32
ACACA-238	ENST00000616352	CAMKK2	Q96RR4	588 aa		29.53	■■■□□ 2.32
ACACA-238	ENST00000616352	SMC4	Q9NTJ3	1288 aa		29.53	■■■□□ 2.32
ACACA-238	ENST00000616352	DBF4	Q9UBU7	674 aa	Predicted RBP	29.53	■■■□□ 2.32
ACACA-238	ENST00000616352	NUP188	Q5SRE5	1749 aa		29.52	■■■□□ 2.32
ACACA-238	ENST00000616352	A1BG	P04217	495 aa		29.52	■■■□□ 2.32
ACACA-238	ENST00000616352	MRPL50	Q8N5N7	158 aa	Known RBP	29.52	■■■□□ 2.32
ACACA-238	ENST00000616352	STK31	Q9BXU1	1019 aa		29.52	■■■□□ 2.32
ACACA-238	ENST00000616352	UBR3	Q6ZT12	1888 aa		29.52	■■■□□ 2.32
ACACA-238	ENST00000616352	NBPF26	B4DH59	902 aa		29.51	■■■□□ 2.31
ACACA-238	ENST00000616352	NBPF14	Q5TI25	921 aa		29.51	■■■□□ 2.31
ACACA-238	ENST00000616352	NBPF10	Q6P3W6	841 aa	Known RBP	29.51	■■■□□ 2.31
ACACA-238	ENST00000616352	NBPF15	Q8N660	670 aa		29.51	■■■□□ 2.31
ACACA-238	ENST00000616352	DDX21	Q9NR30	783 aa	Known RBP eCLIP	29.51	■■■□□ 2.31
ACACA-238	ENST00000616352	CRKL	P46109	303 aa	Known RBP	29.5	■■■□□ 2.31
ACACA-238	ENST00000616352	BAG6	P46379	1132 aa		29.5	■■■□□ 2.31
ACACA-238	ENST00000616352	EN1	Q05925	392 aa	Predicted RBP	29.5	■■■□□ 2.31
ACACA-238	ENST00000616352	PROSER3	Q2NL68	480 aa		29.5	■■■□□ 2.31
ACACA-238	ENST00000616352	CNTNAP4	Q9C0A0	1308 aa		29.5	■■■□□ 2.31
ACACA-238	ENST00000616352	SLC4A2	P04920	1241 aa		29.49	■■■□□ 2.31
ACACA-238	ENST00000616352	INTS5	Q6P9B9	1019 aa	Known RBP	29.49	■■■□□ 2.31
ACACA-238	ENST00000616352	LRP10	Q7Z4F1	713 aa		29.49	■■■□□ 2.31
ACACA-238	ENST00000616352	UPF1	Q92900	1129 aa	Known RBP eCLIP	29.49	■■■□□ 2.31
ACACA-238	ENST00000616352	TUBGCP6	Q96RT7	1819 aa		29.48	■■■□□ 2.31
ACACA-238	ENST00000616352	ANXA1	P04083	346 aa		29.48	■■■□□ 2.31
ACACA-238	ENST00000616352	PIP4K2A	P48426	406 aa	Predicted RBP	29.48	■■■□□ 2.31
ACACA-238	ENST00000616352	EZH2	Q15910	746 aa	Known RBP	29.48	■■■□□ 2.31
ACACA-238	ENST00000616352	CCDC87	Q9NVE4	849 aa		29.48	■■■□□ 2.31
ACACA-238	ENST00000616352	ZBTB1	Q9Y2K1	713 aa		29.48	■■■□□ 2.31
ACACA-238	ENST00000616352	RC3H1	Q5TC82	1133 aa	Known RBP	29.47	■■■□□ 2.31
ACACA-238	ENST00000616352	DEFB132	Q7Z7B7	95 aa		29.47	■■■□□ 2.31
ACACA-238	ENST00000616352	HYPK	Q9NX55	129 aa		29.46	■■■□□ 2.31
ACACA-238	ENST00000616352	MYL6B	P14649	208 aa		29.45	■■■□□ 2.3
ACACA-238	ENST00000616352	G2E3	Q7L622	706 aa		29.45	■■■□□ 2.3
ACACA-238	ENST00000616352	HMGB2	P26583	209 aa	Known RBP	29.44	■■■□□ 2.3
ACACA-238	ENST00000616352	KIF16B	Q96L93	1317 aa		29.44	■■■□□ 2.3
ACACA-238	ENST00000616352	PHAX	Q9H814	394 aa	Known RBP	29.43	■■■□□ 2.3
ACACA-238	ENST00000616352	CANX	P27824	592 aa	Known RBP	29.42	■■■□□ 2.3
ACACA-238	ENST00000616352	C4A	P0C0L4	1744 aa		29.42	■■■□□ 2.3
ACACA-238	ENST00000616352	IL6ST	P40189	918 aa	Predicted RBP	29.42	■■■□□ 2.3
ACACA-238	ENST00000616352	RNF123	Q5XPI4	1314 aa		29.42	■■■□□ 2.3
ACACA-238	ENST00000616352	ARFGEF2	Q9Y6D5	1785 aa		29.41	■■■□□ 2.3
ACACA-238	ENST00000616352	FLII	Q13045	1269 aa		29.41	■■■□□ 2.3
ACACA-238	ENST00000616352	NOB1	Q9ULX3	412 aa	Known RBP	29.41	■■■□□ 2.3
ACACA-238	ENST00000616352	QSER1	Q2KHR3	1735 aa		29.4	■■■□□ 2.3
ACACA-238	ENST00000616352	EIF5	P55010	431 aa	Known RBP	29.4	■■■□□ 2.3
ACACA-238	ENST00000616352	SUPT16H	Q9Y5B9	1047 aa	Known RBP	29.39	■■■□□ 2.3
ACACA-238	ENST00000616352	N4BP2	Q86UW6	1770 aa	Predicted RBP	29.39	■■■□□ 2.3
ACACA-238	ENST00000616352	BCOR	Q6W2J9	1755 aa		29.39	■■■□□ 2.29
ACACA-238	ENST00000616352	NUP98	P52948	1817 aa		29.38	■■■□□ 2.29
ACACA-238	ENST00000616352	PTPRC	P08575	1304 aa		29.38	■■■□□ 2.29
ACACA-238	ENST00000616352	RPS6KA4	O75676	772 aa		29.38	■■■□□ 2.29
ACACA-238	ENST00000616352	XAGE3	Q8WTP9	111 aa		29.38	■■■□□ 2.29
ACACA-238	ENST00000616352	GNPAT	O15228	680 aa		29.37	■■■□□ 2.29
ACACA-238	ENST00000616352	COPS6	Q7L5N1	327 aa		29.37	■■■□□ 2.29
ACACA-238	ENST00000616352	ARHGAP45	Q92619	1136 aa		29.37	■■■□□ 2.29
ACACA-238	ENST00000616352	FRAT1	Q92837	279 aa	Predicted RBP	29.37	■■■□□ 2.29
ACACA-238	ENST00000616352	AK7	Q96M32	723 aa		29.37	■■■□□ 2.29
ACACA-238	ENST00000616352	RRP1	P56182	461 aa	Known RBP	29.36	■■■□□ 2.29
ACACA-238	ENST00000616352	AKT1S1	Q96B36	256 aa		29.36	■■■□□ 2.29
ACACA-238	ENST00000616352	COL15A1	P39059	1388 aa		29.36	■■■□□ 2.29
ACACA-238	ENST00000616352	AMIGO3	Q86WK7	504 aa		29.35	■■■□□ 2.29
ACACA-238	ENST00000616352	IPO8	O15397	1037 aa	Known RBP	29.34	■■■□□ 2.29
ACACA-238	ENST00000616352	ZNF827	Q17R98	1081 aa		29.34	■■■□□ 2.29
ACACA-238	ENST00000616352	ZKSCAN2	Q63HK3	967 aa		29.34	■■■□□ 2.29
ACACA-238	ENST00000616352	SCN7A	Q01118	1682 aa		29.34	■■■□□ 2.29
ACACA-238	ENST00000616352	PLIN1	O60240	522 aa		29.34	■■■□□ 2.29
ACACA-238	ENST00000616352	AIMP1	Q12904	312 aa	Known RBP	29.34	■■■□□ 2.29
ACACA-238	ENST00000616352	FKBP5	Q13451	457 aa	Predicted RBP	29.34	■■■□□ 2.29
ACACA-238	ENST00000616352	RTCB	Q9Y3I0	505 aa	Known RBP	29.34	■■■□□ 2.29
ACACA-238	ENST00000616352	ZNF330	Q9Y3S2	320 aa	Predicted RBP	29.34	■■■□□ 2.29
ACACA-238	ENST00000616352	ANKRD36C	Q5JPF3	1778 aa		29.33	■■■□□ 2.29
ACACA-238	ENST00000616352	TRIM27	P14373	513 aa		29.33	■■■□□ 2.29
ACACA-238	ENST00000616352	ATF7IP	Q6VMQ6	1270 aa		29.33	■■■□□ 2.29
ACACA-238	ENST00000616352	TTLL7	Q6ZT98	887 aa		29.33	■■■□□ 2.29
ACACA-238	ENST00000616352	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	29.32	■■■□□ 2.28
ACACA-238	ENST00000616352	ADCY9	O60503	1353 aa		29.32	■■■□□ 2.28
ACACA-238	ENST00000616352	API5	Q9BZZ5	524 aa	Known RBP	29.31	■■■□□ 2.28
ACACA-238	ENST00000616352	ANO8	Q9HCE9	1232 aa	Predicted RBP	29.31	■■■□□ 2.28
ACACA-238	ENST00000616352	TNN	Q9UQP3	1299 aa		29.31	■■■□□ 2.28
ACACA-238	ENST00000616352	SMIM5	Q71RC9	77 aa		29.3	■■■□□ 2.28
ACACA-238	ENST00000616352	AFDN	P55196	1824 aa	Known RBP	29.29	■■■□□ 2.28
ACACA-238	ENST00000616352	PI4KAP2	A4QPH2	592 aa		29.29	■■■□□ 2.28

Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms