RNA–Protein interactions for RNA: ENST00000615544.4

ACTG1-216, Transcript of actin gamma 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTG1, Length 1,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTG1-216ENST00000615544 ZNF827Q17R98 1081 aa16.22■□□□□ 0.19
ACTG1-216ENST00000615544 KRT24Q2M2I5 525 aa16.22■□□□□ 0.19
ACTG1-216ENST00000615544 SPINK5Q9NQ38 1064 aaPredicted RBP16.22■□□□□ 0.19
ACTG1-216ENST00000615544 UBR3Q6ZT12 1888 aa16.21■□□□□ 0.19
ACTG1-216ENST00000615544 IL16Q14005 1332 aa16.21■□□□□ 0.19
ACTG1-216ENST00000615544 WDR63Q8IWG1 891 aa16.21■□□□□ 0.19
ACTG1-216ENST00000615544 CCDC136Q96JN2 1154 aa16.2■□□□□ 0.18
ACTG1-216ENST00000615544 BABAM1Q9NWV8 329 aa16.2■□□□□ 0.18
ACTG1-216ENST00000615544 FANCIQ9NVI1 1328 aa16.19■□□□□ 0.18
ACTG1-216ENST00000615544 VSIG10Q8N0Z9 540 aa16.19■□□□□ 0.18
ACTG1-216ENST00000615544 CRKLP46109 303 aaKnown RBP16.18■□□□□ 0.18
ACTG1-216ENST00000615544 EXOC6Q8TAG9 804 aa16.18■□□□□ 0.18
ACTG1-216ENST00000615544 QSER1Q2KHR3 1735 aa16.18■□□□□ 0.18
ACTG1-216ENST00000615544 GIGYF1O75420 1035 aaPredicted RBP16.17■□□□□ 0.18
ACTG1-216ENST00000615544 SNRPA1P09661 255 aaKnown RBP16.17■□□□□ 0.18
ACTG1-216ENST00000615544 SMIM5Q71RC9 77 aa16.17■□□□□ 0.18
ACTG1-216ENST00000615544 AK7Q96M32 723 aa16.17■□□□□ 0.18
ACTG1-216ENST00000615544 CYP19A1P11511 503 aaPredicted RBP16.16■□□□□ 0.18
ACTG1-216ENST00000615544 AMIGO3Q86WK7 504 aa16.16■□□□□ 0.18
ACTG1-216ENST00000615544 AKT1S1Q96B36 256 aa16.16■□□□□ 0.18
ACTG1-216ENST00000615544 STK32BQ9NY57 414 aa16.16■□□□□ 0.18
ACTG1-216ENST00000615544 USP16Q9Y5T5 823 aa16.16■□□□□ 0.18
ACTG1-216ENST00000615544 C4AP0C0L4 1744 aa16.16■□□□□ 0.18
ACTG1-216ENST00000615544 CNTNAP4Q9C0A0 1308 aa16.16■□□□□ 0.18
ACTG1-216ENST00000615544 PSDA5PKW4 1024 aaPredicted RBP16.16■□□□□ 0.18
ACTG1-216ENST00000615544 GNPATO15228 680 aa16.16■□□□□ 0.18
ACTG1-216ENST00000615544 PLIN1O60240 522 aa16.16■□□□□ 0.18
ACTG1-216ENST00000615544 PIP4K2AP48426 406 aaPredicted RBP16.16■□□□□ 0.18
ACTG1-216ENST00000615544 R3HDM1Q15032 1099 aaKnown RBP16.16■□□□□ 0.18
ACTG1-216ENST00000615544 NBPF14Q5TI25 921 aa16.16■□□□□ 0.18
ACTG1-216ENST00000615544 ELL2O00472 640 aaPredicted RBP16.15■□□□□ 0.18
ACTG1-216ENST00000615544 SLC15A2Q16348 729 aa16.15■□□□□ 0.18
ACTG1-216ENST00000615544 C8orf58Q8NAV2 365 aa16.15■□□□□ 0.18
ACTG1-216ENST00000615544 CCDC87Q9NVE4 849 aa16.15■□□□□ 0.18
ACTG1-216ENST00000615544 ZBTB1Q9Y2K1 713 aa16.15■□□□□ 0.18
ACTG1-216ENST00000615544 PHF14O94880 888 aa16.14■□□□□ 0.17
ACTG1-216ENST00000615544 STARD3NLO95772 234 aa16.14■□□□□ 0.17
ACTG1-216ENST00000615544 INTS5Q6P9B9 1019 aaKnown RBP16.14■□□□□ 0.17
ACTG1-216ENST00000615544 NECTIN2Q92692 538 aa16.14■□□□□ 0.17
ACTG1-216ENST00000615544 MYH16Q9H6N6 1097 aa16.14■□□□□ 0.17
ACTG1-216ENST00000615544 TFCP2L1Q9NZI6 479 aa16.14■□□□□ 0.17
ACTG1-216ENST00000615544 CASZ1Q86V15 1759 aa16.14■□□□□ 0.17
ACTG1-216ENST00000615544 TSPYL6Q8N831 410 aa16.14■□□□□ 0.17
ACTG1-216ENST00000615544 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.14■□□□□ 0.17
ACTG1-216ENST00000615544 A1BGP04217 495 aa16.13■□□□□ 0.17
ACTG1-216ENST00000615544 EIF2S2P20042 333 aaKnown RBP16.13■□□□□ 0.17
ACTG1-216ENST00000615544 TEX13AQ9BXU3 409 aaPredicted RBP16.13■□□□□ 0.17
ACTG1-216ENST00000615544 PNPLA7Q6ZV29 1317 aa16.12■□□□□ 0.17
ACTG1-216ENST00000615544 CANXP27824 592 aaKnown RBP16.12■□□□□ 0.17
ACTG1-216ENST00000615544 EXOSC9Q06265 439 aaKnown RBP16.12■□□□□ 0.17
ACTG1-216ENST00000615544 PDGFDQ9GZP0 370 aaPredicted RBP16.12■□□□□ 0.17
ACTG1-216ENST00000615544 ZNF330Q9Y3S2 320 aaPredicted RBP16.12■□□□□ 0.17
ACTG1-216ENST00000615544 RC3H1Q5TC82 1133 aaKnown RBP16.11■□□□□ 0.17
ACTG1-216ENST00000615544 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.11■□□□□ 0.17
ACTG1-216ENST00000615544 CRBNQ96SW2 442 aa16.11■□□□□ 0.17
ACTG1-216ENST00000615544 RTCBQ9Y3I0 505 aaKnown RBP16.11■□□□□ 0.17
ACTG1-216ENST00000615544 SOS1Q07889 1333 aaPredicted RBP16.1■□□□□ 0.17
ACTG1-216ENST00000615544 COL15A1P39059 1388 aa16.1■□□□□ 0.17
ACTG1-216ENST00000615544 NBPF26B4DH59 902 aa16.1■□□□□ 0.17
ACTG1-216ENST00000615544 TWISTNBQ3B726 338 aaPredicted RBP16.1■□□□□ 0.17
ACTG1-216ENST00000615544 HDGFL1Q5TGJ6 251 aa16.1■□□□□ 0.17
ACTG1-216ENST00000615544 NBPF10Q6P3W6 841 aaKnown RBP16.1■□□□□ 0.17
ACTG1-216ENST00000615544 NBPF15Q8N660 670 aa16.1■□□□□ 0.17
ACTG1-216ENST00000615544 SRCAPQ6ZRS2 3230 aa16.1■□□□□ 0.17
ACTG1-216ENST00000615544 RPS6KA4O75676 772 aa16.09■□□□□ 0.17
ACTG1-216ENST00000615544 ANXA1P04083 346 aa16.09■□□□□ 0.17
ACTG1-216ENST00000615544 HOXB7P09629 217 aa16.09■□□□□ 0.17
ACTG1-216ENST00000615544 MSH5O43196 834 aa16.08■□□□□ 0.17
ACTG1-216ENST00000615544 HMGB2P26583 209 aaKnown RBP16.08■□□□□ 0.17
ACTG1-216ENST00000615544 SSFA2P28290 1259 aa16.08■□□□□ 0.17
ACTG1-216ENST00000615544 PROSER3Q2NL68 480 aa16.08■□□□□ 0.17
ACTG1-216ENST00000615544 COL23A1Q86Y22 540 aaPredicted RBP16.08■□□□□ 0.17
ACTG1-216ENST00000615544 RBM19Q9Y4C8 960 aaKnown RBP16.08■□□□□ 0.17
ACTG1-216ENST00000615544 SCN7AQ01118 1682 aa16.08■□□□□ 0.16
ACTG1-216ENST00000615544 BCORQ6W2J9 1755 aa16.08■□□□□ 0.16
ACTG1-216ENST00000615544 TCERG1O14776 1098 aaKnown RBP16.08■□□□□ 0.16
ACTG1-216ENST00000615544 MYL6BP14649 208 aa16.08■□□□□ 0.16
ACTG1-216ENST00000615544 C20orf194Q5TEA3 1177 aa16.08■□□□□ 0.16
ACTG1-216ENST00000615544 CHPF2Q9P2E5 772 aa16.08■□□□□ 0.16
ACTG1-216ENST00000615544 ARHGEF1Q92888 912 aaKnown RBP16.06■□□□□ 0.16
ACTG1-216ENST00000615544 IL6STP40189 918 aaPredicted RBP16.05■□□□□ 0.16
ACTG1-216ENST00000615544 EIF5P55010 431 aaKnown RBP16.05■□□□□ 0.16
ACTG1-216ENST00000615544 PDIA6Q15084 440 aa16.05■□□□□ 0.16
ACTG1-216ENST00000615544 TRAPPC3LQ5T215 181 aa16.05■□□□□ 0.16
ACTG1-216ENST00000615544 SRP68Q9UHB9 627 aaKnown RBP16.05■□□□□ 0.16
ACTG1-216ENST00000615544 BCAR3O75815 825 aa16.05■□□□□ 0.16
ACTG1-216ENST00000615544 ARXQ96QS3 562 aa16.05■□□□□ 0.16
ACTG1-216ENST00000615544 ERBB4Q15303 1308 aa16.05■□□□□ 0.16
ACTG1-216ENST00000615544 VAMP4O75379 141 aa16.04■□□□□ 0.16
ACTG1-216ENST00000615544 ZBTB7AO95365 584 aa16.04■□□□□ 0.16
ACTG1-216ENST00000615544 ADRA2BP18089 450 aa16.04■□□□□ 0.16
ACTG1-216ENST00000615544 RFC4P35249 363 aa16.04■□□□□ 0.16
ACTG1-216ENST00000615544 MSL1Q68DK7 614 aa16.04■□□□□ 0.16
ACTG1-216ENST00000615544 FLAD1Q8NFF5 587 aa16.04■□□□□ 0.16
ACTG1-216ENST00000615544 CACNA1FO60840 1977 aa16.03■□□□□ 0.16
ACTG1-216ENST00000615544 LRP10Q7Z4F1 713 aa16.03■□□□□ 0.16
ACTG1-216ENST00000615544 DDX21Q9NR30 783 aaKnown RBP eCLIP16.03■□□□□ 0.16
ACTG1-216ENST00000615544 TBC1D2BQ9UPU7 963 aa16.03■□□□□ 0.16
ACTG1-216ENST00000615544 CCDC30Q5VVM6 783 aa16.02■□□□□ 0.16
ACTG1-216ENST00000615544 NPM2Q86SE8 214 aaKnown RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms