RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 TSPAN10Q9H1Z9 355 aaPredicted RBP10.09□□□□□ -0.79
SCAMP1-205ENST00000614488 CABP1Q9NZU7 370 aa10.09□□□□□ -0.79
SCAMP1-205ENST00000614488 PSMA6P60900 246 aaKnown RBP10.08□□□□□ -0.8
SCAMP1-205ENST00000614488 NBPF1Q3BBV0 1214 aa10.08□□□□□ -0.8
SCAMP1-205ENST00000614488 GAS2L2Q8NHY3 880 aa10.08□□□□□ -0.8
SCAMP1-205ENST00000614488 CUEDC1Q9NWM3 386 aaPredicted RBP10.08□□□□□ -0.8
SCAMP1-205ENST00000614488 ZDHHC3Q9NYG2 299 aa10.08□□□□□ -0.8
SCAMP1-205ENST00000614488 ZMIZ1Q9ULJ6 1067 aa10.08□□□□□ -0.8
SCAMP1-205ENST00000614488 SUPT5HO00267 1087 aaKnown RBP10.07□□□□□ -0.8
SCAMP1-205ENST00000614488 PPP1R15AO75807 674 aaPredicted RBP10.07□□□□□ -0.8
SCAMP1-205ENST00000614488 MSX1P28360 303 aa10.07□□□□□ -0.8
SCAMP1-205ENST00000614488 POTEAQ6S8J7 498 aa10.07□□□□□ -0.8
SCAMP1-205ENST00000614488 RIPOR1Q6ZS17 1223 aa10.07□□□□□ -0.8
SCAMP1-205ENST00000614488 SV2AQ7L0J3 742 aa10.07□□□□□ -0.8
SCAMP1-205ENST00000614488 ZDHHC1Q8WTX9 485 aa10.07□□□□□ -0.8
SCAMP1-205ENST00000614488 ZNF837Q96EG3 531 aaPredicted RBP10.07□□□□□ -0.8
SCAMP1-205ENST00000614488 CDC14CA4D256 554 aa10.06□□□□□ -0.8
SCAMP1-205ENST00000614488 LBRQ14739 615 aaKnown RBP10.06□□□□□ -0.8
SCAMP1-205ENST00000614488 CHMP3Q9Y3E7 222 aa10.06□□□□□ -0.8
SCAMP1-205ENST00000614488 ATP4AP20648 1035 aa10.05□□□□□ -0.8
SCAMP1-205ENST00000614488 NOS2P35228 1153 aa10.05□□□□□ -0.8
SCAMP1-205ENST00000614488 HIRAP54198 1017 aaPredicted RBP10.05□□□□□ -0.8
SCAMP1-205ENST00000614488 SWI5Q1ZZU3 235 aa10.05□□□□□ -0.8
SCAMP1-205ENST00000614488 TBCELQ5QJ74 424 aa10.05□□□□□ -0.8
SCAMP1-205ENST00000614488 VWA5B2Q8N398 1253 aa10.05□□□□□ -0.8
SCAMP1-205ENST00000614488 STAG2Q8N3U4 1231 aa10.05□□□□□ -0.8
SCAMP1-205ENST00000614488 CRISPLD1Q9H336 500 aa10.05□□□□□ -0.8
SCAMP1-205ENST00000614488 GPAMQ9HCL2 828 aa10.05□□□□□ -0.8
SCAMP1-205ENST00000614488 ACIN1Q9UKV3 1341 aaKnown RBP10.05□□□□□ -0.8
SCAMP1-205ENST00000614488 SERTM1A2A2V5 107 aa10.04□□□□□ -0.8
SCAMP1-205ENST00000614488 EML1O00423 815 aa10.04□□□□□ -0.8
SCAMP1-205ENST00000614488 WIPF1O43516 503 aa10.04□□□□□ -0.8
SCAMP1-205ENST00000614488 C21orf2O43822 256 aa10.04□□□□□ -0.8
SCAMP1-205ENST00000614488 CSB-PGBD3P0DP91 1061 aa10.04□□□□□ -0.8
SCAMP1-205ENST00000614488 TATP17735 454 aaPredicted RBP10.04□□□□□ -0.8
SCAMP1-205ENST00000614488 IGFBP4P22692 258 aa10.04□□□□□ -0.8
SCAMP1-205ENST00000614488 DBN1Q16643 649 aa10.04□□□□□ -0.8
SCAMP1-205ENST00000614488 PGBD3Q8N328 593 aa10.04□□□□□ -0.8
SCAMP1-205ENST00000614488 L3MBTL2Q969R5 705 aa10.04□□□□□ -0.8
SCAMP1-205ENST00000614488 HINFPQ9BQA5 517 aa10.04□□□□□ -0.8
SCAMP1-205ENST00000614488 NUCKS1Q9H1E3 243 aaKnown RBP10.04□□□□□ -0.8
SCAMP1-205ENST00000614488 PPP1R12BO60237 982 aaPredicted RBP10.03□□□□□ -0.8
SCAMP1-205ENST00000614488 GMPRP36959 345 aa10.03□□□□□ -0.8
SCAMP1-205ENST00000614488 SCG3Q8WXD2 468 aaKnown RBP10.03□□□□□ -0.8
SCAMP1-205ENST00000614488 AIDAQ96BJ3 306 aa10.03□□□□□ -0.8
SCAMP1-205ENST00000614488 ATAD2Q6PL18 1390 aa10.02□□□□□ -0.8
SCAMP1-205ENST00000614488 EFHC2Q5JST6 749 aa10.02□□□□□ -0.81
SCAMP1-205ENST00000614488 STK32AQ8WU08 396 aa10.02□□□□□ -0.81
SCAMP1-205ENST00000614488 RUBCNLQ9H714 662 aa10.02□□□□□ -0.81
SCAMP1-205ENST00000614488 ZNF232Q9UNY5 417 aa10.02□□□□□ -0.81
SCAMP1-205ENST00000614488 PARP3Q9Y6F1 533 aa10.02□□□□□ -0.81
SCAMP1-205ENST00000614488 TXLNAP40222 546 aa10.01□□□□□ -0.81
SCAMP1-205ENST00000614488 FOXR1Q6PIV2 292 aa10.01□□□□□ -0.81
SCAMP1-205ENST00000614488 GPR161Q8N6U8 529 aaKnown RBP10.01□□□□□ -0.81
SCAMP1-205ENST00000614488 GPC6Q9Y625 555 aaPredicted RBP10.01□□□□□ -0.81
SCAMP1-205ENST00000614488 THBS1P07996 1170 aa10□□□□□ -0.81
SCAMP1-205ENST00000614488 WEE1P30291 646 aa10□□□□□ -0.81
SCAMP1-205ENST00000614488 FAM69CQ0P6D2 419 aa10□□□□□ -0.81
SCAMP1-205ENST00000614488 C1orf53Q5VUE5 145 aa10□□□□□ -0.81
SCAMP1-205ENST00000614488 C2orf49Q9BVC5 232 aaPredicted RBP10□□□□□ -0.81
SCAMP1-205ENST00000614488 FOXO3O43524 673 aa9.99□□□□□ -0.81
SCAMP1-205ENST00000614488 SH3PXD2AQ5TCZ1 1133 aa9.99□□□□□ -0.81
SCAMP1-205ENST00000614488 TMEM164Q5U3C3 297 aa9.99□□□□□ -0.81
SCAMP1-205ENST00000614488 NLRP8Q86W28 1048 aa9.99□□□□□ -0.81
SCAMP1-205ENST00000614488 UBAP2LQ14157 1087 aaKnown RBP9.98□□□□□ -0.81
SCAMP1-205ENST00000614488 GTPBP3Q969Y2 492 aaKnown RBP9.98□□□□□ -0.81
SCAMP1-205ENST00000614488 TRERF1Q96PN7 1200 aa9.98□□□□□ -0.81
SCAMP1-205ENST00000614488 ZIC5Q96T25 663 aa9.98□□□□□ -0.81
SCAMP1-205ENST00000614488 A0A1W2PNR3 127 aa9.97□□□□□ -0.81
SCAMP1-205ENST00000614488 ARSJQ5FYB0 599 aaPredicted RBP9.97□□□□□ -0.81
SCAMP1-205ENST00000614488 FIGNL1Q6PIW4 674 aa9.97□□□□□ -0.81
SCAMP1-205ENST00000614488 COL25A1Q9BXS0 654 aaPredicted RBP9.97□□□□□ -0.81
SCAMP1-205ENST00000614488 LGR5O75473 907 aa9.96□□□□□ -0.82
SCAMP1-205ENST00000614488 BICDL1Q6ZP65 573 aa9.96□□□□□ -0.82
SCAMP1-205ENST00000614488 CHMP7Q8WUX9 453 aaPredicted RBP9.96□□□□□ -0.82
SCAMP1-205ENST00000614488 CLP1Q92989 425 aaKnown RBP9.96□□□□□ -0.82
SCAMP1-205ENST00000614488 CFHR5Q9BXR6 569 aa9.96□□□□□ -0.82
SCAMP1-205ENST00000614488 PHACTR1Q9C0D0 580 aa9.96□□□□□ -0.82
SCAMP1-205ENST00000614488 PHF24Q9UPV7 400 aa9.96□□□□□ -0.82
SCAMP1-205ENST00000614488 KRT76Q01546 638 aa9.95□□□□□ -0.82
SCAMP1-205ENST00000614488 GAS6Q14393 721 aa9.95□□□□□ -0.82
SCAMP1-205ENST00000614488 RHPN1Q8TCX5 695 aa9.95□□□□□ -0.82
SCAMP1-205ENST00000614488 C7orf43Q8WVR3 580 aa9.95□□□□□ -0.82
SCAMP1-205ENST00000614488 ARID3AQ99856 593 aa9.95□□□□□ -0.82
SCAMP1-205ENST00000614488 GPR25O00155 361 aa9.94□□□□□ -0.82
SCAMP1-205ENST00000614488 OCLNQ16625 522 aa9.94□□□□□ -0.82
SCAMP1-205ENST00000614488 RNFT1Q5M7Z0 435 aa9.94□□□□□ -0.82
SCAMP1-205ENST00000614488 SAMD5Q5TGI4 173 aa9.94□□□□□ -0.82
SCAMP1-205ENST00000614488 ALDH16A1Q8IZ83 802 aa9.94□□□□□ -0.82
SCAMP1-205ENST00000614488 NDFIP2Q9NV92 336 aa9.94□□□□□ -0.82
SCAMP1-205ENST00000614488 HCN4Q9Y3Q4 1203 aa9.94□□□□□ -0.82
SCAMP1-205ENST00000614488 CNTNAP3BQ96NU0 1288 aa9.93□□□□□ -0.82
SCAMP1-205ENST00000614488 CNTNAP3Q9BZ76 1288 aa9.93□□□□□ -0.82
SCAMP1-205ENST00000614488 MBIPQ9NS73 344 aa9.93□□□□□ -0.82
SCAMP1-205ENST00000614488 ATXN7L1Q9ULK2 861 aaPredicted RBP9.93□□□□□ -0.82
SCAMP1-205ENST00000614488 PCDHGC4Q9Y5F7 938 aa9.93□□□□□ -0.82
SCAMP1-205ENST00000614488 GJA3Q9Y6H8 435 aa9.93□□□□□ -0.82
SCAMP1-205ENST00000614488 PRMT3O60678 531 aa9.92□□□□□ -0.82
SCAMP1-205ENST00000614488 INSM1Q01101 510 aaPredicted RBP9.92□□□□□ -0.82
SCAMP1-205ENST00000614488 RTN1Q16799 776 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms