RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 IFT57Q9NWB7 429 aa14.87□□□□□ -0.03
SLIRP-212ENST00000613856 MRC1P22897 1456 aa14.87□□□□□ -0.03
SLIRP-212ENST00000613856 PCDH11XQ9BZA7 1347 aa14.87□□□□□ -0.03
SLIRP-212ENST00000613856 PCDH11YQ9BZA8 1340 aa14.87□□□□□ -0.03
SLIRP-212ENST00000613856 KDM3BQ7LBC6 1761 aa14.86□□□□□ -0.03
SLIRP-212ENST00000613856 C1orf141Q5JVX7 400 aa14.86□□□□□ -0.03
SLIRP-212ENST00000613856 COL13A1Q5TAT6 717 aaPredicted RBP14.86□□□□□ -0.03
SLIRP-212ENST00000613856 PCNTO95613 3336 aa14.86□□□□□ -0.03
SLIRP-212ENST00000613856 ZNF853P0CG23 659 aa14.85□□□□□ -0.03
SLIRP-212ENST00000613856 APLP1P51693 650 aa14.85□□□□□ -0.03
SLIRP-212ENST00000613856 GNAI1P63096 354 aa14.85□□□□□ -0.03
SLIRP-212ENST00000613856 FANCIQ9NVI1 1328 aa14.85□□□□□ -0.03
SLIRP-212ENST00000613856 A0A0G2JLW4 131 aa14.84□□□□□ -0.03
SLIRP-212ENST00000613856 CAPN15O75808 1086 aa14.84□□□□□ -0.03
SLIRP-212ENST00000613856 MMP10P09238 476 aa14.84□□□□□ -0.03
SLIRP-212ENST00000613856 DCTN1Q14203 1278 aa14.84□□□□□ -0.03
SLIRP-212ENST00000613856 MCM10Q7L590 875 aa14.84□□□□□ -0.03
SLIRP-212ENST00000613856 CFAP44Q96MT7 982 aa14.84□□□□□ -0.03
SLIRP-212ENST00000613856 THUMPD2Q9BTF0 503 aaKnown RBP14.84□□□□□ -0.03
SLIRP-212ENST00000613856 KDM6AO15550 1401 aaPredicted RBP14.83□□□□□ -0.03
SLIRP-212ENST00000613856 LOC102724428A0A0B4J2F2 783 aa14.83□□□□□ -0.04
SLIRP-212ENST00000613856 GNPATO15228 680 aa14.83□□□□□ -0.04
SLIRP-212ENST00000613856 PHKG2P15735 406 aa14.83□□□□□ -0.04
SLIRP-212ENST00000613856 SIK1P57059 783 aa14.83□□□□□ -0.04
SLIRP-212ENST00000613856 IFNL2Q8IZJ0 200 aa14.83□□□□□ -0.04
SLIRP-212ENST00000613856 ASAP1Q9ULH1 1129 aa14.83□□□□□ -0.04
SLIRP-212ENST00000613856 BCS1LQ9Y276 419 aa14.83□□□□□ -0.04
SLIRP-212ENST00000613856 C4AP0C0L4 1744 aa14.83□□□□□ -0.04
SLIRP-212ENST00000613856 TOMM70O94826 608 aa14.82□□□□□ -0.04
SLIRP-212ENST00000613856 HSP90AB1P08238 724 aaKnown RBP14.82□□□□□ -0.04
SLIRP-212ENST00000613856 SSFA2P28290 1259 aa14.82□□□□□ -0.04
SLIRP-212ENST00000613856 IL17REQ8NFR9 667 aa14.82□□□□□ -0.04
SLIRP-212ENST00000613856 BABAM1Q9NWV8 329 aa14.82□□□□□ -0.04
SLIRP-212ENST00000613856 C10orf71Q711Q0 1435 aa14.82□□□□□ -0.04
SLIRP-212ENST00000613856 ARFGEF1Q9Y6D6 1849 aa14.81□□□□□ -0.04
SLIRP-212ENST00000613856 CHL1O00533 1208 aa14.81□□□□□ -0.04
SLIRP-212ENST00000613856 SMARCC1Q92922 1105 aaPredicted RBP14.81□□□□□ -0.04
SLIRP-212ENST00000613856 COL5A3P25940 1745 aaPredicted RBP14.8□□□□□ -0.04
SLIRP-212ENST00000613856 MYH14Q7Z406 1995 aaKnown RBP14.8□□□□□ -0.04
SLIRP-212ENST00000613856 RNMTO43148 476 aaKnown RBP14.8□□□□□ -0.04
SLIRP-212ENST00000613856 CT47B1P0C2W7 299 aaPredicted RBP14.8□□□□□ -0.04
SLIRP-212ENST00000613856 NKX1-1Q15270 411 aaPredicted RBP14.8□□□□□ -0.04
SLIRP-212ENST00000613856 KCPQ6ZWJ8 1503 aa14.8□□□□□ -0.04
SLIRP-212ENST00000613856 DPEP1P16444 411 aa14.79□□□□□ -0.04
SLIRP-212ENST00000613856 ARHGAP27Q6ZUM4 889 aa14.79□□□□□ -0.04
SLIRP-212ENST00000613856 TSR2Q969E8 191 aaKnown RBP14.79□□□□□ -0.04
SLIRP-212ENST00000613856 DCAF5Q96JK2 942 aa14.79□□□□□ -0.04
SLIRP-212ENST00000613856 SLC4A9Q96Q91 983 aa14.79□□□□□ -0.04
SLIRP-212ENST00000613856 MBIPQ9NS73 344 aa14.79□□□□□ -0.04
SLIRP-212ENST00000613856 SBF1O95248 1867 aa14.78□□□□□ -0.04
SLIRP-212ENST00000613856 ATP6V1AP38606 617 aa14.78□□□□□ -0.04
SLIRP-212ENST00000613856 LGR6Q9HBX8 967 aa14.78□□□□□ -0.04
SLIRP-212ENST00000613856 RCAN3Q9UKA8 241 aa14.78□□□□□ -0.04
SLIRP-212ENST00000613856 RNF123Q5XPI4 1314 aa14.77□□□□□ -0.04
SLIRP-212ENST00000613856 KCNA3P22001 575 aa14.77□□□□□ -0.05
SLIRP-212ENST00000613856 TEFQ10587 303 aa14.77□□□□□ -0.05
SLIRP-212ENST00000613856 TAF7Q15545 349 aaPredicted RBP14.77□□□□□ -0.05
SLIRP-212ENST00000613856 KLRG1Q96E93 195 aa14.77□□□□□ -0.05
SLIRP-212ENST00000613856 ATG3Q9NT62 314 aa14.77□□□□□ -0.05
SLIRP-212ENST00000613856 LAS1LQ9Y4W2 734 aaKnown RBP14.77□□□□□ -0.05
SLIRP-212ENST00000613856 UBR2Q8IWV8 1755 aa14.77□□□□□ -0.05
SLIRP-212ENST00000613856 C9orf131Q5VYM1 1079 aa14.76□□□□□ -0.05
SLIRP-212ENST00000613856 TSPYL4Q9UJ04 414 aa14.76□□□□□ -0.05
SLIRP-212ENST00000613856 EXOSC9Q06265 439 aaKnown RBP14.75□□□□□ -0.05
SLIRP-212ENST00000613856 ZNF428Q96B54 188 aa14.75□□□□□ -0.05
SLIRP-212ENST00000613856 SLC52A2Q9HAB3 445 aa14.75□□□□□ -0.05
SLIRP-212ENST00000613856 TMOD3Q9NYL9 352 aa14.75□□□□□ -0.05
SLIRP-212ENST00000613856 CACNA1FO60840 1977 aa14.74□□□□□ -0.05
SLIRP-212ENST00000613856 SOS1Q07889 1333 aaPredicted RBP14.74□□□□□ -0.05
SLIRP-212ENST00000613856 ERVV-2B6SEH9 535 aa14.74□□□□□ -0.05
SLIRP-212ENST00000613856 GYS1P13807 737 aa14.74□□□□□ -0.05
SLIRP-212ENST00000613856 TGFB2P61812 414 aa14.74□□□□□ -0.05
SLIRP-212ENST00000613856 JMYQ8N9B5 988 aa14.74□□□□□ -0.05
SLIRP-212ENST00000613856 ARHGEF1Q92888 912 aaKnown RBP14.74□□□□□ -0.05
SLIRP-212ENST00000613856 TNRC6CQ9HCJ0 1690 aaKnown RBP14.74□□□□□ -0.05
SLIRP-212ENST00000613856 RBM46Q8TBY0 533 aaKnown RBP14.73□□□□□ -0.05
SLIRP-212ENST00000613856 ZNF831Q5JPB2 1677 aa14.72□□□□□ -0.05
SLIRP-212ENST00000613856 RRAGCQ9HB90 399 aa14.72□□□□□ -0.05
SLIRP-212ENST00000613856 SUPT16HQ9Y5B9 1047 aaKnown RBP14.72□□□□□ -0.05
SLIRP-212ENST00000613856 LAMB4A4D0S4 1761 aa14.72□□□□□ -0.05
SLIRP-212ENST00000613856 BTBD11A6QL63 1104 aa14.71□□□□□ -0.05
SLIRP-212ENST00000613856 TRAPPC3LQ5T215 181 aa14.71□□□□□ -0.05
SLIRP-212ENST00000613856 SRP68Q9UHB9 627 aaKnown RBP14.71□□□□□ -0.05
SLIRP-212ENST00000613856 RTCBQ9Y3I0 505 aaKnown RBP14.71□□□□□ -0.05
SLIRP-212ENST00000613856 TJP1Q07157 1748 aa14.71□□□□□ -0.05
SLIRP-212ENST00000613856 CCDC88AQ3V6T2 1871 aa14.7□□□□□ -0.06
SLIRP-212ENST00000613856 CHRNA5P30532 468 aa14.7□□□□□ -0.06
SLIRP-212ENST00000613856 RARSP54136 660 aaKnown RBP14.7□□□□□ -0.06
SLIRP-212ENST00000613856 TWISTNBQ3B726 338 aaPredicted RBP14.7□□□□□ -0.06
SLIRP-212ENST00000613856 ALDH1L2Q3SY69 923 aa14.7□□□□□ -0.06
SLIRP-212ENST00000613856 TNS4Q8IZW8 715 aa14.7□□□□□ -0.06
SLIRP-212ENST00000613856 C8orf58Q8NAV2 365 aa14.7□□□□□ -0.06
SLIRP-212ENST00000613856 RBM42Q9BTD8 480 aaKnown RBP14.7□□□□□ -0.06
SLIRP-212ENST00000613856 MIS18AQ9NYP9 233 aa14.7□□□□□ -0.06
SLIRP-212ENST00000613856 RNF181Q9P0P0 153 aa14.7□□□□□ -0.06
SLIRP-212ENST00000613856 HEG1Q9ULI3 1381 aa14.7□□□□□ -0.06
SLIRP-212ENST00000613856 VAMP4O75379 141 aa14.69□□□□□ -0.06
SLIRP-212ENST00000613856 HOXB7P09629 217 aa14.69□□□□□ -0.06
SLIRP-212ENST00000613856 PRELPP51888 382 aa14.69□□□□□ -0.06
SLIRP-212ENST00000613856 RRP1P56182 461 aaKnown RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms