RNA–Protein interactions for RNA: ENST00000612828.4

CNTNAP3B-211, Transcript of contactin associated protein like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 7,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-211ENST00000612828 CFAP70Q5T0N1 1121 aa12.53□□□□□ -0.4
CNTNAP3B-211ENST00000612828 TTC30AQ86WT1 665 aa12.53□□□□□ -0.4
CNTNAP3B-211ENST00000612828 TMCO3Q6UWJ1 677 aa12.53□□□□□ -0.4
CNTNAP3B-211ENST00000612828 ZBTB9Q96C00 473 aa12.53□□□□□ -0.4
CNTNAP3B-211ENST00000612828 PRPF4BQ13523 1007 aaKnown RBP12.53□□□□□ -0.4
CNTNAP3B-211ENST00000612828 CCT6BQ92526 530 aa12.53□□□□□ -0.4
CNTNAP3B-211ENST00000612828 ZMAT2Q96NC0 199 aaKnown RBP12.53□□□□□ -0.4
CNTNAP3B-211ENST00000612828 SUDS3Q9H7L9 328 aaPredicted RBP12.53□□□□□ -0.4
CNTNAP3B-211ENST00000612828 SYNCQ9H7C4 482 aa12.53□□□□□ -0.4
CNTNAP3B-211ENST00000612828 ZKSCAN1P17029 563 aaPredicted RBP12.52□□□□□ -0.4
CNTNAP3B-211ENST00000612828 PPFIBP1Q86W92 1011 aa12.52□□□□□ -0.4
CNTNAP3B-211ENST00000612828 CHMP6Q96FZ7 201 aa12.52□□□□□ -0.4
CNTNAP3B-211ENST00000612828 A0A1W2PRG0 241 aa12.52□□□□□ -0.41
CNTNAP3B-211ENST00000612828 INPP1P49441 399 aa12.52□□□□□ -0.41
CNTNAP3B-211ENST00000612828 WDR46O15213 610 aaKnown RBP12.52□□□□□ -0.41
CNTNAP3B-211ENST00000612828 PRPHP41219 470 aa12.52□□□□□ -0.41
CNTNAP3B-211ENST00000612828 UTP14CQ5TAP6 766 aaKnown RBP12.52□□□□□ -0.41
CNTNAP3B-211ENST00000612828 DDX19BQ9UMR2 479 aa12.52□□□□□ -0.41
CNTNAP3B-211ENST00000612828 VIMP08670 466 aaKnown RBP12.51□□□□□ -0.41
CNTNAP3B-211ENST00000612828 SMG6Q86US8 1419 aaKnown RBP12.51□□□□□ -0.41
CNTNAP3B-211ENST00000612828 C6orf163Q5TEZ5 329 aa12.51□□□□□ -0.41
CNTNAP3B-211ENST00000612828 MAP10Q9P2G4 905 aa12.51□□□□□ -0.41
CNTNAP3B-211ENST00000612828 STIM1Q13586 685 aa12.51□□□□□ -0.41
CNTNAP3B-211ENST00000612828 TSR2Q969E8 191 aaKnown RBP12.51□□□□□ -0.41
CNTNAP3B-211ENST00000612828 RUNDC1Q96C34 613 aa12.51□□□□□ -0.41
CNTNAP3B-211ENST00000612828 SPOUT1Q5T280 376 aaKnown RBP12.51□□□□□ -0.41
CNTNAP3B-211ENST00000612828 TAF4BQ92750 862 aa12.51□□□□□ -0.41
CNTNAP3B-211ENST00000612828 SMC3Q9UQE7 1217 aa12.51□□□□□ -0.41
CNTNAP3B-211ENST00000612828 CEP57Q86XR8 500 aa12.51□□□□□ -0.41
CNTNAP3B-211ENST00000612828 FERMT1Q9BQL6 677 aa12.51□□□□□ -0.41
CNTNAP3B-211ENST00000612828 HMOX1P09601 288 aa12.5□□□□□ -0.41
CNTNAP3B-211ENST00000612828 MICALCLQ6ZW33 695 aa12.5□□□□□ -0.41
CNTNAP3B-211ENST00000612828 CCDC65Q8IXS2 484 aa12.5□□□□□ -0.41
CNTNAP3B-211ENST00000612828 MTHFSP49914 203 aa12.5□□□□□ -0.41
CNTNAP3B-211ENST00000612828 TMTC4Q5T4D3 741 aa12.5□□□□□ -0.41
CNTNAP3B-211ENST00000612828 HFM1A2PYH4 1435 aa12.5□□□□□ -0.41
CNTNAP3B-211ENST00000612828 TEFQ10587 303 aa12.5□□□□□ -0.41
CNTNAP3B-211ENST00000612828 CCDC117Q8IWD4 279 aaPredicted RBP12.5□□□□□ -0.41
CNTNAP3B-211ENST00000612828 IRX5P78411 483 aaPredicted RBP12.5□□□□□ -0.41
CNTNAP3B-211ENST00000612828 SREK1Q8WXA9 508 aaKnown RBP12.5□□□□□ -0.41
CNTNAP3B-211ENST00000612828 FSD2A1L4K1 749 aa12.5□□□□□ -0.41
CNTNAP3B-211ENST00000612828 MKL2Q9ULH7 1088 aa12.5□□□□□ -0.41
CNTNAP3B-211ENST00000612828 ANKRD35Q8N283 1001 aa12.5□□□□□ -0.41
CNTNAP3B-211ENST00000612828 AQRO60306 1485 aaKnown RBP eCLIP12.5□□□□□ -0.41
CNTNAP3B-211ENST00000612828 SPECC1Q5M775 1068 aa12.49□□□□□ -0.41
CNTNAP3B-211ENST00000612828 DDX27Q96GQ7 796 aaKnown RBP12.49□□□□□ -0.41
CNTNAP3B-211ENST00000612828 CEP83Q9Y592 693 aa12.49□□□□□ -0.41
CNTNAP3B-211ENST00000612828 AFAP1L1Q8TED9 768 aa12.49□□□□□ -0.41
CNTNAP3B-211ENST00000612828 FOSL2P15408 326 aa12.49□□□□□ -0.41
CNTNAP3B-211ENST00000612828 RNF214Q8ND24 703 aa12.49□□□□□ -0.41
CNTNAP3B-211ENST00000612828 LRRC45Q96CN5 670 aa12.49□□□□□ -0.41
CNTNAP3B-211ENST00000612828 KIF4BQ2VIQ3 1234 aa12.49□□□□□ -0.41
CNTNAP3B-211ENST00000612828 FAM212AQ96EL1 285 aa12.49□□□□□ -0.41
CNTNAP3B-211ENST00000612828 C1orf115Q9H7X2 142 aa12.49□□□□□ -0.41
CNTNAP3B-211ENST00000612828 TRIM35Q9UPQ4 493 aa12.49□□□□□ -0.41
CNTNAP3B-211ENST00000612828 AFG3L2Q9Y4W6 797 aa12.49□□□□□ -0.41
CNTNAP3B-211ENST00000612828 GCOM1H8Y6P7 765 aaPredicted RBP12.49□□□□□ -0.41
CNTNAP3B-211ENST00000612828 MYZAPP0CAP1 466 aa12.49□□□□□ -0.41
CNTNAP3B-211ENST00000612828 EXOSC9Q06265 439 aaKnown RBP12.49□□□□□ -0.41
CNTNAP3B-211ENST00000612828 RBBP5Q15291 538 aaKnown RBP12.49□□□□□ -0.41
CNTNAP3B-211ENST00000612828 CFAP36Q96G28 342 aa12.48□□□□□ -0.41
CNTNAP3B-211ENST00000612828 FAM107BQ9H098 131 aa12.48□□□□□ -0.41
CNTNAP3B-211ENST00000612828 PTPRGP23470 1445 aa12.48□□□□□ -0.41
CNTNAP3B-211ENST00000612828 CALCOCO2Q13137 446 aa12.48□□□□□ -0.41
CNTNAP3B-211ENST00000612828 PALM2Q8IXS6 379 aa12.48□□□□□ -0.41
CNTNAP3B-211ENST00000612828 RNF217Q8TC41 542 aa12.48□□□□□ -0.41
CNTNAP3B-211ENST00000612828 CABP2Q9NPB3 220 aa12.48□□□□□ -0.41
CNTNAP3B-211ENST00000612828 FNDC3AQ9Y2H6 1198 aaKnown RBP12.48□□□□□ -0.41
CNTNAP3B-211ENST00000612828 TACC3Q9Y6A5 838 aa12.48□□□□□ -0.41
CNTNAP3B-211ENST00000612828 SYF2O95926 243 aaKnown RBP12.48□□□□□ -0.41
CNTNAP3B-211ENST00000612828 TNIP1Q15025 636 aa12.48□□□□□ -0.41
CNTNAP3B-211ENST00000612828 MSL1Q68DK7 614 aa12.48□□□□□ -0.41
CNTNAP3B-211ENST00000612828 ATRIPQ8WXE1 791 aa12.48□□□□□ -0.41
CNTNAP3B-211ENST00000612828 RASA3Q14644 834 aa12.48□□□□□ -0.41
CNTNAP3B-211ENST00000612828 FAM114A2Q9NRY5 505 aa12.48□□□□□ -0.41
CNTNAP3B-211ENST00000612828 SMTNL1A8MU46 457 aa12.48□□□□□ -0.41
CNTNAP3B-211ENST00000612828 TRAK2O60296 914 aa12.48□□□□□ -0.41
CNTNAP3B-211ENST00000612828 NANOGNBQ7Z5D8 188 aa12.48□□□□□ -0.41
CNTNAP3B-211ENST00000612828 SRCIN1Q9C0H9 1055 aa12.48□□□□□ -0.41
CNTNAP3B-211ENST00000612828 LIMCH1Q9UPQ0 1083 aa12.48□□□□□ -0.41
CNTNAP3B-211ENST00000612828 G3BP1Q13283 466 aaKnown RBP eCLIP12.47□□□□□ -0.41
CNTNAP3B-211ENST00000612828 TTC31Q49AM3 519 aaPredicted RBP12.47□□□□□ -0.41
CNTNAP3B-211ENST00000612828 GAPVD1Q14C86 1478 aa12.47□□□□□ -0.41
CNTNAP3B-211ENST00000612828 FKBP15Q5T1M5 1219 aa12.47□□□□□ -0.41
CNTNAP3B-211ENST00000612828 DDX46Q7L014 1031 aaKnown RBP12.47□□□□□ -0.41
CNTNAP3B-211ENST00000612828 RBM42Q9BTD8 480 aaKnown RBP12.47□□□□□ -0.41
CNTNAP3B-211ENST00000612828 NAIPQ13075 1403 aa12.47□□□□□ -0.41
CNTNAP3B-211ENST00000612828 BICDL1Q6ZP65 573 aa12.47□□□□□ -0.41
CNTNAP3B-211ENST00000612828 AFAP1Q8N556 730 aa12.47□□□□□ -0.41
CNTNAP3B-211ENST00000612828 C4orf50Q6ZRC1 276 aa12.47□□□□□ -0.41
CNTNAP3B-211ENST00000612828 RAI14Q9P0K7 980 aa12.47□□□□□ -0.41
CNTNAP3B-211ENST00000612828 CASQ1P31415 396 aa12.46□□□□□ -0.41
CNTNAP3B-211ENST00000612828 PPP2R5DQ14738 602 aa12.46□□□□□ -0.41
CNTNAP3B-211ENST00000612828 RIC3Q7Z5B4 369 aa12.46□□□□□ -0.41
CNTNAP3B-211ENST00000612828 RAP1GDS1P52306 607 aa12.46□□□□□ -0.41
CNTNAP3B-211ENST00000612828 SLC12A5Q9H2X9 1139 aa12.46□□□□□ -0.41
CNTNAP3B-211ENST00000612828 CXorf38Q8TB03 319 aa12.46□□□□□ -0.42
CNTNAP3B-211ENST00000612828 TSTA3Q13630 321 aaPredicted RBP12.46□□□□□ -0.42
CNTNAP3B-211ENST00000612828 PPFIA3O75145 1194 aa12.45□□□□□ -0.42
CNTNAP3B-211ENST00000612828 STRN4Q9NRL3 753 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms