RNA–Protein interactions for RNA: ENST00000608669.1

LINC00963-212, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 531 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-212ENST00000608669 USP16Q9Y5T5 823 aa15.96■□□□□ 0.15
LINC00963-212ENST00000608669 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.95■□□□□ 0.14
LINC00963-212ENST00000608669 A1BGP04217 495 aa15.95■□□□□ 0.14
LINC00963-212ENST00000608669 INTS5Q6P9B9 1019 aaKnown RBP15.95■□□□□ 0.14
LINC00963-212ENST00000608669 ELL2O00472 640 aaPredicted RBP15.94■□□□□ 0.14
LINC00963-212ENST00000608669 CCDC87Q9NVE4 849 aa15.94■□□□□ 0.14
LINC00963-212ENST00000608669 CNTNAP4Q9C0A0 1308 aa15.94■□□□□ 0.14
LINC00963-212ENST00000608669 CHL1O00533 1208 aa15.93■□□□□ 0.14
LINC00963-212ENST00000608669 ANXA1P04083 346 aa15.93■□□□□ 0.14
LINC00963-212ENST00000608669 SRP68Q9UHB9 627 aaKnown RBP15.93■□□□□ 0.14
LINC00963-212ENST00000608669 EIF2S2P20042 333 aaKnown RBP15.92■□□□□ 0.14
LINC00963-212ENST00000608669 NGEFQ8N5V2 710 aa15.92■□□□□ 0.14
LINC00963-212ENST00000608669 TCERG1O14776 1098 aaKnown RBP15.91■□□□□ 0.14
LINC00963-212ENST00000608669 GIGYF1O75420 1035 aaPredicted RBP15.91■□□□□ 0.14
LINC00963-212ENST00000608669 SNRPA1P09661 255 aaKnown RBP15.91■□□□□ 0.14
LINC00963-212ENST00000608669 ZNF853P0CG23 659 aa15.91■□□□□ 0.14
LINC00963-212ENST00000608669 CFAP44Q96MT7 982 aa15.91■□□□□ 0.14
LINC00963-212ENST00000608669 ARXQ96QS3 562 aa15.91■□□□□ 0.14
LINC00963-212ENST00000608669 RTCBQ9Y3I0 505 aaKnown RBP15.91■□□□□ 0.14
LINC00963-212ENST00000608669 SOS1Q07889 1333 aaPredicted RBP15.91■□□□□ 0.14
LINC00963-212ENST00000608669 COL15A1P39059 1388 aa15.9■□□□□ 0.14
LINC00963-212ENST00000608669 PROSER3Q2NL68 480 aa15.9■□□□□ 0.14
LINC00963-212ENST00000608669 VSIG10Q8N0Z9 540 aa15.9■□□□□ 0.14
LINC00963-212ENST00000608669 TSPYL6Q8N831 410 aa15.9■□□□□ 0.14
LINC00963-212ENST00000608669 IFT57Q9NWB7 429 aa15.9■□□□□ 0.14
LINC00963-212ENST00000608669 FANCIQ9NVI1 1328 aa15.9■□□□□ 0.14
LINC00963-212ENST00000608669 NBPF26B4DH59 902 aa15.89■□□□□ 0.13
LINC00963-212ENST00000608669 RPS6KA4O75676 772 aa15.89■□□□□ 0.13
LINC00963-212ENST00000608669 MYL6BP14649 208 aa15.89■□□□□ 0.13
LINC00963-212ENST00000608669 HNRNPUQ00839 825 aaKnown RBP eCLIP15.89■□□□□ 0.13
LINC00963-212ENST00000608669 NBPF10Q6P3W6 841 aaKnown RBP15.89■□□□□ 0.13
LINC00963-212ENST00000608669 NBPF15Q8N660 670 aa15.89■□□□□ 0.13
LINC00963-212ENST00000608669 C8orf58Q8NAV2 365 aa15.89■□□□□ 0.13
LINC00963-212ENST00000608669 ARHGEF1Q92888 912 aaKnown RBP15.89■□□□□ 0.13
LINC00963-212ENST00000608669 CDCA7LQ96GN5 454 aa15.89■□□□□ 0.13
LINC00963-212ENST00000608669 SCN7AQ01118 1682 aa15.89■□□□□ 0.13
LINC00963-212ENST00000608669 STARD3NLO95772 234 aa15.88■□□□□ 0.13
LINC00963-212ENST00000608669 GNAI1P63096 354 aa15.88■□□□□ 0.13
LINC00963-212ENST00000608669 CCDC27Q2M243 656 aa15.88■□□□□ 0.13
LINC00963-212ENST00000608669 BCORQ6W2J9 1755 aa15.87■□□□□ 0.13
LINC00963-212ENST00000608669 LRP5O75197 1615 aa15.87■□□□□ 0.13
LINC00963-212ENST00000608669 SSFA2P28290 1259 aa15.87■□□□□ 0.13
LINC00963-212ENST00000608669 TRAPPC3LQ5T215 181 aa15.87■□□□□ 0.13
LINC00963-212ENST00000608669 RC3H1Q5TC82 1133 aaKnown RBP15.87■□□□□ 0.13
LINC00963-212ENST00000608669 DUSP27Q5VZP5 1158 aa15.87■□□□□ 0.13
LINC00963-212ENST00000608669 KLHL34Q8N239 644 aa15.87■□□□□ 0.13
LINC00963-212ENST00000608669 ZNF428Q96B54 188 aa15.87■□□□□ 0.13
LINC00963-212ENST00000608669 TBC1D2BQ9UPU7 963 aa15.87■□□□□ 0.13
LINC00963-212ENST00000608669 ZNF521Q96K83 1311 aa15.87■□□□□ 0.13
LINC00963-212ENST00000608669 USPL1Q5W0Q7 1092 aa15.86■□□□□ 0.13
LINC00963-212ENST00000608669 RFC4P35249 363 aa15.85■□□□□ 0.13
LINC00963-212ENST00000608669 CALD1Q05682 793 aaKnown RBP15.85■□□□□ 0.13
LINC00963-212ENST00000608669 CHPF2Q9P2E5 772 aa15.85■□□□□ 0.13
LINC00963-212ENST00000608669 SRCAPQ6ZRS2 3230 aa15.85■□□□□ 0.13
LINC00963-212ENST00000608669 PTGER2P43116 358 aa15.84■□□□□ 0.13
LINC00963-212ENST00000608669 EXOSC9Q06265 439 aaKnown RBP15.84■□□□□ 0.13
LINC00963-212ENST00000608669 FKBP8Q14318 412 aa15.84■□□□□ 0.13
LINC00963-212ENST00000608669 HDGFL1Q5TGJ6 251 aa15.84■□□□□ 0.13
LINC00963-212ENST00000608669 BICDL1Q6ZP65 573 aa15.84■□□□□ 0.13
LINC00963-212ENST00000608669 MTFR1LQ9H019 292 aa15.84■□□□□ 0.13
LINC00963-212ENST00000608669 COL24A1Q17RW2 1714 aa15.84■□□□□ 0.13
LINC00963-212ENST00000608669 USP42Q9H9J4 1324 aaKnown RBP15.84■□□□□ 0.13
LINC00963-212ENST00000608669 GYS1P13807 737 aa15.83■□□□□ 0.12
LINC00963-212ENST00000608669 EIF5P55010 431 aaKnown RBP15.83■□□□□ 0.12
LINC00963-212ENST00000608669 TTLL7Q6ZT98 887 aa15.83■□□□□ 0.12
LINC00963-212ENST00000608669 YTHDC1Q96MU7 727 aaKnown RBP15.83■□□□□ 0.12
LINC00963-212ENST00000608669 TEX13AQ9BXU3 409 aaPredicted RBP15.83■□□□□ 0.12
LINC00963-212ENST00000608669 SPON1Q9HCB6 807 aa15.83■□□□□ 0.12
LINC00963-212ENST00000608669 AIMP1Q12904 312 aaKnown RBP15.82■□□□□ 0.12
LINC00963-212ENST00000608669 DZIP3Q86Y13 1208 aaKnown RBP15.82■□□□□ 0.12
LINC00963-212ENST00000608669 WDR63Q8IWG1 891 aa15.82■□□□□ 0.12
LINC00963-212ENST00000608669 BCL2L12Q9HB09 334 aa15.82■□□□□ 0.12
LINC00963-212ENST00000608669 BABAM1Q9NWV8 329 aa15.82■□□□□ 0.12
LINC00963-212ENST00000608669 PPP1R1BQ9UD71 204 aaPredicted RBP15.82■□□□□ 0.12
LINC00963-212ENST00000608669 IL16Q14005 1332 aa15.81■□□□□ 0.12
LINC00963-212ENST00000608669 PDIA6Q15084 440 aa15.81■□□□□ 0.12
LINC00963-212ENST00000608669 ZBTB3Q9H5J0 574 aa15.81■□□□□ 0.12
LINC00963-212ENST00000608669 ZPR1O75312 459 aa15.8■□□□□ 0.12
LINC00963-212ENST00000608669 MMP10P09238 476 aa15.8■□□□□ 0.12
LINC00963-212ENST00000608669 IL6STP40189 918 aaPredicted RBP15.8■□□□□ 0.12
LINC00963-212ENST00000608669 GOLGA2Q08379 1002 aa15.8■□□□□ 0.12
LINC00963-212ENST00000608669 TWISTNBQ3B726 338 aaPredicted RBP15.8■□□□□ 0.12
LINC00963-212ENST00000608669 CCDC24Q8N4L8 307 aa15.8■□□□□ 0.12
LINC00963-212ENST00000608669 FLAD1Q8NFF5 587 aa15.8■□□□□ 0.12
LINC00963-212ENST00000608669 SGIP1Q9BQI5 828 aa15.8■□□□□ 0.12
LINC00963-212ENST00000608669 WWC3Q9ULE0 1092 aa15.8■□□□□ 0.12
LINC00963-212ENST00000608669 CAMTA2O94983 1202 aa15.79■□□□□ 0.12
LINC00963-212ENST00000608669 ADRA2BP18089 450 aa15.79■□□□□ 0.12
LINC00963-212ENST00000608669 DDR1Q08345 913 aa15.79■□□□□ 0.12
LINC00963-212ENST00000608669 HLFQ16534 295 aa15.79■□□□□ 0.12
LINC00963-212ENST00000608669 NARFQ9UHQ1 456 aa15.79■□□□□ 0.12
LINC00963-212ENST00000608669 AFDNP55196 1824 aaKnown RBP15.79■□□□□ 0.12
LINC00963-212ENST00000608669 NUP98P52948 1817 aa15.78■□□□□ 0.12
LINC00963-212ENST00000608669 ARFGEF2Q9Y6D5 1785 aa15.78■□□□□ 0.12
LINC00963-212ENST00000608669 FAM177BA6PVY3 158 aa15.78■□□□□ 0.12
LINC00963-212ENST00000608669 TBC1D9BQ66K14 1250 aa15.78■□□□□ 0.12
LINC00963-212ENST00000608669 LRP10Q7Z4F1 713 aa15.78■□□□□ 0.12
LINC00963-212ENST00000608669 XAGE3Q8WTP9 111 aa15.78■□□□□ 0.12
LINC00963-212ENST00000608669 PHAXQ9H814 394 aaKnown RBP15.78■□□□□ 0.12
LINC00963-212ENST00000608669 SLFN5Q08AF3 891 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms