RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 PRAMEF22A3QJZ6 481 aa19.16■□□□□ 0.66
HDDC2-204ENST00000608295 PIP4K2AP48426 406 aaPredicted RBP19.16■□□□□ 0.66
HDDC2-204ENST00000608295 GYS1P13807 737 aa19.15■□□□□ 0.66
HDDC2-204ENST00000608295 ADRA2BP18089 450 aa19.15■□□□□ 0.66
HDDC2-204ENST00000608295 NEUROD2Q15784 382 aa19.15■□□□□ 0.66
HDDC2-204ENST00000608295 FMNL2Q96PY5 1086 aa19.15■□□□□ 0.66
HDDC2-204ENST00000608295 SOS1Q07889 1333 aaPredicted RBP19.15■□□□□ 0.66
HDDC2-204ENST00000608295 LAMB4A4D0S4 1761 aa19.14■□□□□ 0.66
HDDC2-204ENST00000608295 USP42Q9H9J4 1324 aaKnown RBP19.14■□□□□ 0.65
HDDC2-204ENST00000608295 N4BP2Q86UW6 1770 aaPredicted RBP19.14■□□□□ 0.65
HDDC2-204ENST00000608295 SENP3-EIF4A1A0A087X0R7 540 aa19.13■□□□□ 0.65
HDDC2-204ENST00000608295 GPR162Q16538 588 aa19.13■□□□□ 0.65
HDDC2-204ENST00000608295 USPL1Q5W0Q7 1092 aa19.13■□□□□ 0.65
HDDC2-204ENST00000608295 VSIG10Q8N0Z9 540 aa19.13■□□□□ 0.65
HDDC2-204ENST00000608295 PNNQ9H307 717 aaKnown RBP19.13■□□□□ 0.65
HDDC2-204ENST00000608295 SCN7AQ01118 1682 aa19.13■□□□□ 0.65
HDDC2-204ENST00000608295 RIPK4P57078 832 aa19.12■□□□□ 0.65
HDDC2-204ENST00000608295 FKBP8Q14318 412 aa19.12■□□□□ 0.65
HDDC2-204ENST00000608295 HTATSF1O43719 755 aaKnown RBP19.11■□□□□ 0.65
HDDC2-204ENST00000608295 STARD3NLO95772 234 aa19.11■□□□□ 0.65
HDDC2-204ENST00000608295 A1BGP04217 495 aa19.11■□□□□ 0.65
HDDC2-204ENST00000608295 CCDC184Q52MB2 194 aa19.11■□□□□ 0.65
HDDC2-204ENST00000608295 ADAMTS8Q9UP79 889 aa19.11■□□□□ 0.65
HDDC2-204ENST00000608295 ZPR1O75312 459 aa19.1■□□□□ 0.65
HDDC2-204ENST00000608295 TAF7Q15545 349 aaPredicted RBP19.1■□□□□ 0.65
HDDC2-204ENST00000608295 KIAA1551Q9HCM1 1747 aa19.09■□□□□ 0.65
HDDC2-204ENST00000608295 TMPOP42166 694 aaKnown RBP19.09■□□□□ 0.65
HDDC2-204ENST00000608295 NLGN1Q8N2Q7 840 aa19.09■□□□□ 0.65
HDDC2-204ENST00000608295 USP16Q9Y5T5 823 aa19.09■□□□□ 0.65
HDDC2-204ENST00000608295 AFDNP55196 1824 aaKnown RBP19.09■□□□□ 0.65
HDDC2-204ENST00000608295 KIF13BQ9NQT8 1826 aa19.09■□□□□ 0.65
HDDC2-204ENST00000608295 BCORQ6W2J9 1755 aa19.09■□□□□ 0.65
HDDC2-204ENST00000608295 DDR1Q08345 913 aa19.08■□□□□ 0.64
HDDC2-204ENST00000608295 PARP3Q9Y6F1 533 aa19.08■□□□□ 0.64
HDDC2-204ENST00000608295 YBX3P16989 372 aaKnown RBP eCLIP19.07■□□□□ 0.642e-9■□□□□ 10.6
HDDC2-204ENST00000608295 YY1P25490 414 aa19.07■□□□□ 0.64
HDDC2-204ENST00000608295 BICDL1Q6ZP65 573 aa19.07■□□□□ 0.64
HDDC2-204ENST00000608295 RUNDC1Q96C34 613 aa19.07■□□□□ 0.64
HDDC2-204ENST00000608295 TBC1D2BQ9UPU7 963 aa19.07■□□□□ 0.64
HDDC2-204ENST00000608295 CHD4Q14839 1912 aa19.07■□□□□ 0.64
HDDC2-204ENST00000608295 C10orf71Q711Q0 1435 aa19.07■□□□□ 0.64
HDDC2-204ENST00000608295 TSPYL4Q9UJ04 414 aa19.06■□□□□ 0.64
HDDC2-204ENST00000608295 LAS1LQ9Y4W2 734 aaKnown RBP19.06■□□□□ 0.64
HDDC2-204ENST00000608295 CD2APQ9Y5K6 639 aa19.06■□□□□ 0.64
HDDC2-204ENST00000608295 PXDNLA1KZ92 1463 aa19.05■□□□□ 0.64
HDDC2-204ENST00000608295 ANP32CO43423 234 aa19.05■□□□□ 0.64
HDDC2-204ENST00000608295 SNRPA1P09661 255 aaKnown RBP19.05■□□□□ 0.64
HDDC2-204ENST00000608295 TEX13AQ9BXU3 409 aaPredicted RBP19.05■□□□□ 0.64
HDDC2-204ENST00000608295 NARFQ9UHQ1 456 aa19.05■□□□□ 0.64
HDDC2-204ENST00000608295 EIF5P55010 431 aaKnown RBP19.04■□□□□ 0.64
HDDC2-204ENST00000608295 NPM2Q86SE8 214 aaKnown RBP19.04■□□□□ 0.64
HDDC2-204ENST00000608295 BCL2L12Q9HB09 334 aa19.04■□□□□ 0.64
HDDC2-204ENST00000608295 LMOD3Q0VAK6 560 aa19.03■□□□□ 0.64
HDDC2-204ENST00000608295 NFIXQ14938 502 aa19.03■□□□□ 0.64
HDDC2-204ENST00000608295 NGEFQ8N5V2 710 aa19.03■□□□□ 0.64
HDDC2-204ENST00000608295 POLRMTO00411 1230 aaKnown RBP19.02■□□□□ 0.64
HDDC2-204ENST00000608295 PNISRQ8TF01 805 aaKnown RBP19.02■□□□□ 0.64
HDDC2-204ENST00000608295 MRS2Q9HD23 443 aa19.02■□□□□ 0.64
HDDC2-204ENST00000608295 A0A0G2JLW4 131 aa19.01■□□□□ 0.63
HDDC2-204ENST00000608295 IL6STP40189 918 aaPredicted RBP19.01■□□□□ 0.63
HDDC2-204ENST00000608295 EIF4A1P60842 406 aaKnown RBP19.01■□□□□ 0.63
HDDC2-204ENST00000608295 DZIP3Q86Y13 1208 aaKnown RBP19.01■□□□□ 0.63
HDDC2-204ENST00000608295 A0A087WZG4 1122 aa19■□□□□ 0.63
HDDC2-204ENST00000608295 NBPF26B4DH59 902 aa19■□□□□ 0.63
HDDC2-204ENST00000608295 APAF1O14727 1248 aa19■□□□□ 0.63
HDDC2-204ENST00000608295 TBC1D9BQ66K14 1250 aa19■□□□□ 0.63
HDDC2-204ENST00000608295 NBPF10Q6P3W6 841 aaKnown RBP19■□□□□ 0.63
HDDC2-204ENST00000608295 CCDC24Q8N4L8 307 aa19■□□□□ 0.63
HDDC2-204ENST00000608295 NBPF15Q8N660 670 aa19■□□□□ 0.63
HDDC2-204ENST00000608295 TRIM35Q9UPQ4 493 aa19■□□□□ 0.63
HDDC2-204ENST00000608295 CARMIL3Q8ND23 1372 aa19■□□□□ 0.63
HDDC2-204ENST00000608295 BRCA1P38398 1863 aaKnown RBP19■□□□□ 0.63
HDDC2-204ENST00000608295 GOLGB1Q14789 3259 aaKnown RBP19■□□□□ 0.63
HDDC2-204ENST00000608295 NRXN2Q9P2S2 1712 aa19■□□□□ 0.63
HDDC2-204ENST00000608295 MYL6BP14649 208 aa18.99■□□□□ 0.63
HDDC2-204ENST00000608295 DPEP1P16444 411 aa18.99■□□□□ 0.63
HDDC2-204ENST00000608295 KRT24Q2M2I5 525 aa18.99■□□□□ 0.63
HDDC2-204ENST00000608295 NECTIN2Q92692 538 aa18.99■□□□□ 0.63
HDDC2-204ENST00000608295 UTRNP46939 3433 aa18.99■□□□□ 0.63
HDDC2-204ENST00000608295 GIGYF1O75420 1035 aaPredicted RBP18.98■□□□□ 0.63
HDDC2-204ENST00000608295 CAMTA2O94983 1202 aa18.98■□□□□ 0.63
HDDC2-204ENST00000608295 ANKRD31Q8N7Z5 1873 aa18.97■□□□□ 0.63
HDDC2-204ENST00000608295 EIF2S2P20042 333 aaKnown RBP18.97■□□□□ 0.63
HDDC2-204ENST00000608295 TM4SF1P30408 202 aa18.97■□□□□ 0.63
HDDC2-204ENST00000608295 CHRNA5P30532 468 aa18.97■□□□□ 0.63
HDDC2-204ENST00000608295 BCS1LQ9Y276 419 aa18.97■□□□□ 0.63
HDDC2-204ENST00000608295 CACNA1SQ13698 1873 aa18.97■□□□□ 0.63
HDDC2-204ENST00000608295 SERPINB2P05120 415 aa18.96■□□□□ 0.63
HDDC2-204ENST00000608295 COL11A2P13942 1736 aaPredicted RBP18.96■□□□□ 0.63
HDDC2-204ENST00000608295 FAM177BA6PVY3 158 aa18.95■□□□□ 0.62
HDDC2-204ENST00000608295 NPHP1O15259 732 aa18.95■□□□□ 0.62
HDDC2-204ENST00000608295 ANXA1P04083 346 aa18.95■□□□□ 0.62
HDDC2-204ENST00000608295 DLEC1Q9Y238 1755 aa18.93■□□□□ 0.62
HDDC2-204ENST00000608295 NUP98P52948 1817 aa18.93■□□□□ 0.62
HDDC2-204ENST00000608295 TGFB2P61812 414 aa18.92■□□□□ 0.62
HDDC2-204ENST00000608295 ZBTB3Q9H5J0 574 aa18.92■□□□□ 0.62
HDDC2-204ENST00000608295 SALL2Q9Y467 1007 aaPredicted RBP18.92■□□□□ 0.62
HDDC2-204ENST00000608295 ARFGEF1Q9Y6D6 1849 aa18.91■□□□□ 0.62
HDDC2-204ENST00000608295 GRIN3BO60391 1043 aa18.91■□□□□ 0.62
HDDC2-204ENST00000608295 HLFQ16534 295 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms