RNA–Protein interactions for RNA: ENST00000606878.1

LINC00240-203, long intergenic non-protein coding RNA 240, humanhuman

TSL 1 (best)

Gene LINC00240, Length 927 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-203ENST00000606878 GYS1P13807 737 aa21.77■■□□□ 1.08
LINC00240-203ENST00000606878 ZBTB1Q9Y2K1 713 aa21.77■■□□□ 1.08
LINC00240-203ENST00000606878 SOS1Q07889 1333 aaPredicted RBP21.77■■□□□ 1.07
LINC00240-203ENST00000606878 MMP10P09238 476 aa21.76■■□□□ 1.07
LINC00240-203ENST00000606878 NPM2Q86SE8 214 aaKnown RBP21.76■■□□□ 1.07
LINC00240-203ENST00000606878 CD2APQ9Y5K6 639 aa21.76■■□□□ 1.07
LINC00240-203ENST00000606878 MYH14Q7Z406 1995 aaKnown RBP21.76■■□□□ 1.07
LINC00240-203ENST00000606878 A0A087WZG4 1122 aa21.75■■□□□ 1.07
LINC00240-203ENST00000606878 SRP68Q9UHB9 627 aaKnown RBP21.75■■□□□ 1.07
LINC00240-203ENST00000606878 USP16Q9Y5T5 823 aa21.75■■□□□ 1.07
LINC00240-203ENST00000606878 VIRMAQ69YN4 1812 aaKnown RBP21.75■■□□□ 1.07
LINC00240-203ENST00000606878 A1BGP04217 495 aa21.74■■□□□ 1.07
LINC00240-203ENST00000606878 EIF5P55010 431 aaKnown RBP21.74■■□□□ 1.07
LINC00240-203ENST00000606878 CCDC184Q52MB2 194 aa21.74■■□□□ 1.07
LINC00240-203ENST00000606878 NARFQ9UHQ1 456 aa21.74■■□□□ 1.07
LINC00240-203ENST00000606878 USP42Q9H9J4 1324 aaKnown RBP21.74■■□□□ 1.07
LINC00240-203ENST00000606878 COL5A3P25940 1745 aaPredicted RBP21.73■■□□□ 1.07
LINC00240-203ENST00000606878 BABAM1Q9NWV8 329 aa21.73■■□□□ 1.07
LINC00240-203ENST00000606878 IL6STP40189 918 aaPredicted RBP21.72■■□□□ 1.07
LINC00240-203ENST00000606878 USPL1Q5W0Q7 1092 aa21.72■■□□□ 1.07
LINC00240-203ENST00000606878 MRS2Q9HD23 443 aa21.72■■□□□ 1.07
LINC00240-203ENST00000606878 PARP3Q9Y6F1 533 aa21.72■■□□□ 1.07
LINC00240-203ENST00000606878 PRAMEF22A3QJZ6 481 aa21.71■■□□□ 1.07
LINC00240-203ENST00000606878 EIF4A1P60842 406 aaKnown RBP21.71■■□□□ 1.07
LINC00240-203ENST00000606878 FKBP8Q14318 412 aa21.71■■□□□ 1.07
LINC00240-203ENST00000606878 TSPYL4Q9UJ04 414 aa21.71■■□□□ 1.07
LINC00240-203ENST00000606878 ZNF330Q9Y3S2 320 aaPredicted RBP21.71■■□□□ 1.07
LINC00240-203ENST00000606878 TJP1Q07157 1748 aa21.71■■□□□ 1.07
LINC00240-203ENST00000606878 COL24A1Q17RW2 1714 aa21.7■■□□□ 1.06
LINC00240-203ENST00000606878 SIPA1L3O60292 1781 aaPredicted RBP21.7■■□□□ 1.06
LINC00240-203ENST00000606878 APAF1O14727 1248 aa21.7■■□□□ 1.06
LINC00240-203ENST00000606878 NLGN2Q8NFZ4 835 aa21.7■■□□□ 1.06
LINC00240-203ENST00000606878 TRIM35Q9UPQ4 493 aa21.7■■□□□ 1.06
LINC00240-203ENST00000606878 CICQ96RK0 1608 aaPredicted RBP21.69■■□□□ 1.06
LINC00240-203ENST00000606878 GIGYF1O75420 1035 aaPredicted RBP21.69■■□□□ 1.06
LINC00240-203ENST00000606878 COL15A1P39059 1388 aa21.69■■□□□ 1.06
LINC00240-203ENST00000606878 UBR2Q8IWV8 1755 aa21.69■■□□□ 1.06
LINC00240-203ENST00000606878 GPR162Q16538 588 aa21.68■■□□□ 1.06
LINC00240-203ENST00000606878 TM4SF1P30408 202 aa21.67■■□□□ 1.06
LINC00240-203ENST00000606878 TBC1D2BQ9UPU7 963 aa21.67■■□□□ 1.06
LINC00240-203ENST00000606878 LAS1LQ9Y4W2 734 aaKnown RBP21.66■■□□□ 1.06
LINC00240-203ENST00000606878 DLG5Q8TDM6 1919 aa21.65■■□□□ 1.06
LINC00240-203ENST00000606878 CHL1O00533 1208 aa21.65■■□□□ 1.06
LINC00240-203ENST00000606878 PELP1Q8IZL8 1130 aaKnown RBP21.65■■□□□ 1.06
LINC00240-203ENST00000606878 PIP4K2AP48426 406 aaPredicted RBP21.64■■□□□ 1.05
LINC00240-203ENST00000606878 BCL2L12Q9HB09 334 aa21.64■■□□□ 1.05
LINC00240-203ENST00000606878 NBPF26B4DH59 902 aa21.63■■□□□ 1.05
LINC00240-203ENST00000606878 TGFB2P61812 414 aa21.63■■□□□ 1.05
LINC00240-203ENST00000606878 CALD1Q05682 793 aaKnown RBP21.63■■□□□ 1.05
LINC00240-203ENST00000606878 DDR1Q08345 913 aa21.63■■□□□ 1.05
LINC00240-203ENST00000606878 NFIXQ14938 502 aa21.63■■□□□ 1.05
LINC00240-203ENST00000606878 NBPF10Q6P3W6 841 aaKnown RBP21.63■■□□□ 1.05
LINC00240-203ENST00000606878 DZIP3Q86Y13 1208 aaKnown RBP21.63■■□□□ 1.05
LINC00240-203ENST00000606878 NBPF15Q8N660 670 aa21.63■■□□□ 1.05
LINC00240-203ENST00000606878 POLRMTO00411 1230 aaKnown RBP21.61■■□□□ 1.05
LINC00240-203ENST00000606878 BICDL1Q6ZP65 573 aa21.61■■□□□ 1.05
LINC00240-203ENST00000606878 CFAP44Q96MT7 982 aa21.61■■□□□ 1.05
LINC00240-203ENST00000606878 GRIN3BO60391 1043 aa21.6■■□□□ 1.05
LINC00240-203ENST00000606878 CAMTA2O94983 1202 aa21.59■■□□□ 1.05
LINC00240-203ENST00000606878 SERPINB2P05120 415 aa21.59■■□□□ 1.05
LINC00240-203ENST00000606878 EIF2S2P20042 333 aaKnown RBP21.59■■□□□ 1.05
LINC00240-203ENST00000606878 TBC1D9BQ66K14 1250 aa21.58■■□□□ 1.05
LINC00240-203ENST00000606878 CLEC4GQ6UXB4 293 aa21.58■■□□□ 1.05
LINC00240-203ENST00000606878 NGEFQ8N5V2 710 aa21.58■■□□□ 1.05
LINC00240-203ENST00000606878 SETDB2Q96T68 719 aa21.58■■□□□ 1.05
LINC00240-203ENST00000606878 A0A0G2JLW4 131 aa21.57■■□□□ 1.04
LINC00240-203ENST00000606878 GNAI1P63096 354 aa21.57■■□□□ 1.04
LINC00240-203ENST00000606878 ZNF652Q9Y2D9 606 aa21.57■■□□□ 1.04
LINC00240-203ENST00000606878 ERBB4Q15303 1308 aa21.56■■□□□ 1.04
LINC00240-203ENST00000606878 MYL6BP14649 208 aa21.56■■□□□ 1.04
LINC00240-203ENST00000606878 IFT57Q9NWB7 429 aa21.56■■□□□ 1.04
LINC00240-203ENST00000606878 C4AP0C0L4 1744 aa21.55■■□□□ 1.04
LINC00240-203ENST00000606878 RGL2O15211 777 aa21.55■■□□□ 1.04
LINC00240-203ENST00000606878 ZNF853P0CG23 659 aa21.55■■□□□ 1.04
LINC00240-203ENST00000606878 DPEP1P16444 411 aa21.55■■□□□ 1.04
LINC00240-203ENST00000606878 YBX3P16989 372 aaKnown RBP eCLIP21.55■■□□□ 1.04
LINC00240-203ENST00000606878 CCDC27Q2M243 656 aa21.55■■□□□ 1.04
LINC00240-203ENST00000606878 NCBP3Q53F19 620 aaKnown RBP21.55■■□□□ 1.04
LINC00240-203ENST00000606878 FAM9BQ8IZU0 186 aa21.55■■□□□ 1.04
LINC00240-203ENST00000606878 YY1P25490 414 aa21.54■■□□□ 1.04
LINC00240-203ENST00000606878 MBIPQ9NS73 344 aa21.54■■□□□ 1.04
LINC00240-203ENST00000606878 WWC3Q9ULE0 1092 aa21.53■■□□□ 1.04
LINC00240-203ENST00000606878 KDM3BQ7LBC6 1761 aa21.53■■□□□ 1.04
LINC00240-203ENST00000606878 C10orf71Q711Q0 1435 aa21.53■■□□□ 1.04
LINC00240-203ENST00000606878 SENP3-EIF4A1A0A087X0R7 540 aa21.52■■□□□ 1.04
LINC00240-203ENST00000606878 ERVV-1B6SEH8 477 aa21.52■■□□□ 1.04
LINC00240-203ENST00000606878 KRT24Q2M2I5 525 aa21.52■■□□□ 1.04
LINC00240-203ENST00000606878 KIF6Q6ZMV9 814 aa21.52■■□□□ 1.04
LINC00240-203ENST00000606878 WWC1Q8IX03 1113 aa21.52■■□□□ 1.04
LINC00240-203ENST00000606878 NPHP1O15259 732 aa21.51■■□□□ 1.03
LINC00240-203ENST00000606878 HOXB7P09629 217 aa21.51■■□□□ 1.03
LINC00240-203ENST00000606878 NECTIN2Q92692 538 aa21.51■■□□□ 1.03
LINC00240-203ENST00000606878 PIM2Q9P1W9 311 aa21.51■■□□□ 1.03
LINC00240-203ENST00000606878 PDIA6Q15084 440 aa21.5■■□□□ 1.03
LINC00240-203ENST00000606878 DUSP27Q5VZP5 1158 aa21.5■■□□□ 1.03
LINC00240-203ENST00000606878 TTLL7Q6ZT98 887 aa21.5■■□□□ 1.03
LINC00240-203ENST00000606878 NIP7Q9Y221 180 aaKnown RBP eCLIP21.5■■□□□ 1.03
LINC00240-203ENST00000606878 CARMIL3Q8ND23 1372 aa21.49■■□□□ 1.03
LINC00240-203ENST00000606878 KCNA3P22001 575 aa21.49■■□□□ 1.03
LINC00240-203ENST00000606878 HLFQ16534 295 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms