RNA–Protein interactions for RNA: ENST00000606055.1

LINC00458-204, long intergenic non-protein coding RNA 458, humanhuman

TSL 3

Gene LINC00458, Length 425 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-204ENST00000606055 SNRPA1P09661 255 aaKnown RBP9.29□□□□□ -0.92
LINC00458-204ENST00000606055 AKT1S1Q96B36 256 aa9.29□□□□□ -0.92
LINC00458-204ENST00000606055 THUMPD2Q9BTF0 503 aaKnown RBP9.29□□□□□ -0.92
LINC00458-204ENST00000606055 MSH5O43196 834 aa9.28□□□□□ -0.92
LINC00458-204ENST00000606055 PTCD1O75127 700 aaKnown RBP9.28□□□□□ -0.92
LINC00458-204ENST00000606055 GIGYF1O75420 1035 aaPredicted RBP9.28□□□□□ -0.92
LINC00458-204ENST00000606055 ALDH1L2Q3SY69 923 aa9.28□□□□□ -0.92
LINC00458-204ENST00000606055 RC3H1Q5TC82 1133 aaKnown RBP9.28□□□□□ -0.92
LINC00458-204ENST00000606055 FLAD1Q8NFF5 587 aa9.28□□□□□ -0.92
LINC00458-204ENST00000606055 SPON1Q9HCB6 807 aa9.28□□□□□ -0.92
LINC00458-204ENST00000606055 STARD3NLO95772 234 aa9.27□□□□□ -0.93
LINC00458-204ENST00000606055 SLC39A6Q13433 755 aa9.27□□□□□ -0.93
LINC00458-204ENST00000606055 ZNF496Q96IT1 587 aaPredicted RBP9.27□□□□□ -0.93
LINC00458-204ENST00000606055 SPINK5Q9NQ38 1064 aaPredicted RBP9.27□□□□□ -0.93
LINC00458-204ENST00000606055 ZBTB7AO95365 584 aa9.26□□□□□ -0.93
LINC00458-204ENST00000606055 ITPK1Q13572 414 aa9.26□□□□□ -0.93
LINC00458-204ENST00000606055 TWISTNBQ3B726 338 aaPredicted RBP9.26□□□□□ -0.93
LINC00458-204ENST00000606055 IFFO2Q5TF58 517 aa9.26□□□□□ -0.93
LINC00458-204ENST00000606055 CCDC30Q5VVM6 783 aa9.26□□□□□ -0.93
LINC00458-204ENST00000606055 LINC00116Q8NCU8 138 aa9.26□□□□□ -0.93
LINC00458-204ENST00000606055 SLC16A10Q8TF71 515 aa9.26□□□□□ -0.93
LINC00458-204ENST00000606055 MTFR1LQ9H019 292 aa9.26□□□□□ -0.93
LINC00458-204ENST00000606055 PPP1R1BQ9UD71 204 aaPredicted RBP9.26□□□□□ -0.93
LINC00458-204ENST00000606055 PNPLA7Q6ZV29 1317 aa9.26□□□□□ -0.93
LINC00458-204ENST00000606055 CNTNAP4Q9C0A0 1308 aa9.26□□□□□ -0.93
LINC00458-204ENST00000606055 IBTKQ9P2D0 1353 aaPredicted RBP9.25□□□□□ -0.93
LINC00458-204ENST00000606055 CACNA1FO60840 1977 aa9.25□□□□□ -0.93
LINC00458-204ENST00000606055 GNPATO15228 680 aa9.25□□□□□ -0.93
LINC00458-204ENST00000606055 VAMP4O75379 141 aa9.25□□□□□ -0.93
LINC00458-204ENST00000606055 PHF14O94880 888 aa9.25□□□□□ -0.93
LINC00458-204ENST00000606055 CDCA7LQ96GN5 454 aa9.25□□□□□ -0.93
LINC00458-204ENST00000606055 PDGFDQ9GZP0 370 aaPredicted RBP9.25□□□□□ -0.93
LINC00458-204ENST00000606055 ATF5Q9Y2D1 282 aaPredicted RBP9.25□□□□□ -0.93
LINC00458-204ENST00000606055 SALL2Q9Y467 1007 aaPredicted RBP9.25□□□□□ -0.93
LINC00458-204ENST00000606055 CYP19A1P11511 503 aaPredicted RBP9.24□□□□□ -0.93
LINC00458-204ENST00000606055 ADRA2BP18089 450 aa9.24□□□□□ -0.93
LINC00458-204ENST00000606055 SSFA2P28290 1259 aa9.24□□□□□ -0.93
LINC00458-204ENST00000606055 EXOSC9Q06265 439 aaKnown RBP9.24□□□□□ -0.93
LINC00458-204ENST00000606055 COL23A1Q86Y22 540 aaPredicted RBP9.24□□□□□ -0.93
LINC00458-204ENST00000606055 TSR2Q969E8 191 aaKnown RBP9.24□□□□□ -0.93
LINC00458-204ENST00000606055 SLC4A9Q96Q91 983 aa9.24□□□□□ -0.93
LINC00458-204ENST00000606055 DBF4Q9UBU7 674 aaPredicted RBP9.24□□□□□ -0.93
LINC00458-204ENST00000606055 RTCBQ9Y3I0 505 aaKnown RBP9.24□□□□□ -0.93
LINC00458-204ENST00000606055 LAS1LQ9Y4W2 734 aaKnown RBP9.24□□□□□ -0.93
LINC00458-204ENST00000606055 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.23□□□□□ -0.93
LINC00458-204ENST00000606055 KCNQ3O43525 872 aa9.23□□□□□ -0.93
LINC00458-204ENST00000606055 POLD1P28340 1107 aa9.23□□□□□ -0.93
LINC00458-204ENST00000606055 CRKLP46109 303 aaKnown RBP9.23□□□□□ -0.93
LINC00458-204ENST00000606055 DNAJC10Q8IXB1 793 aa9.23□□□□□ -0.93
LINC00458-204ENST00000606055 C8orf58Q8NAV2 365 aa9.23□□□□□ -0.93
LINC00458-204ENST00000606055 ARHGAP45Q92619 1136 aa9.23□□□□□ -0.93
LINC00458-204ENST00000606055 DDX21Q9NR30 783 aaKnown RBP eCLIP9.23□□□□□ -0.93
LINC00458-204ENST00000606055 HYPKQ9NX55 129 aa9.23□□□□□ -0.93
LINC00458-204ENST00000606055 MIS18AQ9NYP9 233 aa9.23□□□□□ -0.93
LINC00458-204ENST00000606055 BCORQ6W2J9 1755 aa9.22□□□□□ -0.93
LINC00458-204ENST00000606055 NUP98P52948 1817 aa9.22□□□□□ -0.93
LINC00458-204ENST00000606055 AFDNP55196 1824 aaKnown RBP9.22□□□□□ -0.93
LINC00458-204ENST00000606055 RPS6KA4O75676 772 aa9.22□□□□□ -0.93
LINC00458-204ENST00000606055 IL6STP40189 918 aaPredicted RBP9.22□□□□□ -0.93
LINC00458-204ENST00000606055 TRAPPC3LQ5T215 181 aa9.22□□□□□ -0.93
LINC00458-204ENST00000606055 HDGFL1Q5TGJ6 251 aa9.22□□□□□ -0.93
LINC00458-204ENST00000606055 STK31Q9BXU1 1019 aa9.22□□□□□ -0.93
LINC00458-204ENST00000606055 CCDC87Q9NVE4 849 aa9.22□□□□□ -0.93
LINC00458-204ENST00000606055 SCN7AQ01118 1682 aa9.21□□□□□ -0.93
LINC00458-204ENST00000606055 A0A087WZG4 1122 aa9.21□□□□□ -0.94
LINC00458-204ENST00000606055 RFC4P35249 363 aa9.21□□□□□ -0.94
LINC00458-204ENST00000606055 RARSP54136 660 aaKnown RBP9.21□□□□□ -0.94
LINC00458-204ENST00000606055 LRP10Q7Z4F1 713 aa9.21□□□□□ -0.94
LINC00458-204ENST00000606055 NPM2Q86SE8 214 aaKnown RBP9.21□□□□□ -0.94
LINC00458-204ENST00000606055 TSPYL6Q8N831 410 aa9.21□□□□□ -0.94
LINC00458-204ENST00000606055 PTPRCP08575 1304 aa9.21□□□□□ -0.94
LINC00458-204ENST00000606055 KIF16BQ96L93 1317 aa9.21□□□□□ -0.94
LINC00458-204ENST00000606055 CHD4Q14839 1912 aa9.21□□□□□ -0.94
LINC00458-204ENST00000606055 KIF13BQ9NQT8 1826 aa9.2□□□□□ -0.94
LINC00458-204ENST00000606055 IPO8O15397 1037 aaKnown RBP9.2□□□□□ -0.94
LINC00458-204ENST00000606055 CENPBP07199 599 aaPredicted RBP9.2□□□□□ -0.94
LINC00458-204ENST00000606055 YY1P25490 414 aa9.2□□□□□ -0.94
LINC00458-204ENST00000606055 EIF5P55010 431 aaKnown RBP9.2□□□□□ -0.94
LINC00458-204ENST00000606055 PDIA6Q15084 440 aa9.2□□□□□ -0.94
LINC00458-204ENST00000606055 MSL1Q68DK7 614 aa9.2□□□□□ -0.94
LINC00458-204ENST00000606055 INTS5Q6P9B9 1019 aaKnown RBP9.2□□□□□ -0.94
LINC00458-204ENST00000606055 YTHDC1Q96MU7 727 aaKnown RBP9.2□□□□□ -0.94
LINC00458-204ENST00000606055 RCAN3Q9UKA8 241 aa9.2□□□□□ -0.94
LINC00458-204ENST00000606055 USP16Q9Y5T5 823 aa9.2□□□□□ -0.94
LINC00458-204ENST00000606055 ERVV-1B6SEH8 477 aa9.19□□□□□ -0.94
LINC00458-204ENST00000606055 MS4A1P11836 297 aa9.19□□□□□ -0.94
LINC00458-204ENST00000606055 CANXP27824 592 aaKnown RBP9.19□□□□□ -0.94
LINC00458-204ENST00000606055 PTGER2P43116 358 aa9.19□□□□□ -0.94
LINC00458-204ENST00000606055 CLEC4GQ6UXB4 293 aa9.19□□□□□ -0.94
LINC00458-204ENST00000606055 SMIM5Q71RC9 77 aa9.19□□□□□ -0.94
LINC00458-204ENST00000606055 AMIGO3Q86WK7 504 aa9.19□□□□□ -0.94
LINC00458-204ENST00000606055 ARHGEF1Q92888 912 aaKnown RBP9.19□□□□□ -0.94
LINC00458-204ENST00000606055 ARXQ96QS3 562 aa9.19□□□□□ -0.94
LINC00458-204ENST00000606055 ZBTB1Q9Y2K1 713 aa9.19□□□□□ -0.94
LINC00458-204ENST00000606055 RNF123Q5XPI4 1314 aa9.19□□□□□ -0.94
LINC00458-204ENST00000606055 COL15A1P39059 1388 aa9.19□□□□□ -0.94
LINC00458-204ENST00000606055 ZPR1O75312 459 aa9.18□□□□□ -0.94
LINC00458-204ENST00000606055 DDX58O95786 925 aaKnown RBP9.18□□□□□ -0.94
LINC00458-204ENST00000606055 SLC4A2P04920 1241 aa9.18□□□□□ -0.94
LINC00458-204ENST00000606055 KRT24Q2M2I5 525 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms