RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 USP16Q9Y5T5 823 aa14.21□□□□□ -0.13
TUBE1-210ENST00000604967 A1BGP04217 495 aa14.2□□□□□ -0.14
TUBE1-210ENST00000604967 HMGB2P26583 209 aaKnown RBP14.2□□□□□ -0.14
TUBE1-210ENST00000604967 CANXP27824 592 aaKnown RBP14.2□□□□□ -0.14
TUBE1-210ENST00000604967 EIF5P55010 431 aaKnown RBP14.2□□□□□ -0.14
TUBE1-210ENST00000604967 USPL1Q5W0Q7 1092 aa14.2□□□□□ -0.14
TUBE1-210ENST00000604967 C10orf71Q711Q0 1435 aa14.2□□□□□ -0.14
TUBE1-210ENST00000604967 COL15A1P39059 1388 aa14.2□□□□□ -0.14
TUBE1-210ENST00000604967 KIF13BQ9NQT8 1826 aa14.2□□□□□ -0.14
TUBE1-210ENST00000604967 PXDNLA1KZ92 1463 aa14.19□□□□□ -0.14
TUBE1-210ENST00000604967 HTATSF1O43719 755 aaKnown RBP14.19□□□□□ -0.14
TUBE1-210ENST00000604967 TM4SF1P30408 202 aa14.19□□□□□ -0.14
TUBE1-210ENST00000604967 CCDC146Q8IYE0 955 aa14.19□□□□□ -0.14
TUBE1-210ENST00000604967 TTC5Q8N0Z6 440 aa14.19□□□□□ -0.14
TUBE1-210ENST00000604967 NLGN1Q8N2Q7 840 aa14.19□□□□□ -0.14
TUBE1-210ENST00000604967 NBPF26B4DH59 902 aa14.18□□□□□ -0.14
TUBE1-210ENST00000604967 YY1P25490 414 aa14.18□□□□□ -0.14
TUBE1-210ENST00000604967 ZEB1P37275 1124 aaPredicted RBP14.18□□□□□ -0.14
TUBE1-210ENST00000604967 NBPF10Q6P3W6 841 aaKnown RBP14.18□□□□□ -0.14
TUBE1-210ENST00000604967 NBPF15Q8N660 670 aa14.18□□□□□ -0.14
TUBE1-210ENST00000604967 FMNL2Q96PY5 1086 aa14.18□□□□□ -0.14
TUBE1-210ENST00000604967 NARFQ9UHQ1 456 aa14.18□□□□□ -0.14
TUBE1-210ENST00000604967 ADAMTS8Q9UP79 889 aa14.18□□□□□ -0.14
TUBE1-210ENST00000604967 RRP7AQ9Y3A4 280 aaKnown RBP14.18□□□□□ -0.14
TUBE1-210ENST00000604967 KDM3BQ7LBC6 1761 aa14.18□□□□□ -0.14
TUBE1-210ENST00000604967 POLRMTO00411 1230 aaKnown RBP14.17□□□□□ -0.14
TUBE1-210ENST00000604967 KCNA3P22001 575 aa14.17□□□□□ -0.14
TUBE1-210ENST00000604967 TMPOP42166 694 aaKnown RBP14.17□□□□□ -0.14
TUBE1-210ENST00000604967 NFIXQ14938 502 aa14.17□□□□□ -0.14
TUBE1-210ENST00000604967 TAF7Q15545 349 aaPredicted RBP14.17□□□□□ -0.14
TUBE1-210ENST00000604967 GPR162Q16538 588 aa14.17□□□□□ -0.14
TUBE1-210ENST00000604967 RTF1Q92541 710 aaKnown RBP14.17□□□□□ -0.14
TUBE1-210ENST00000604967 N4BP2Q86UW6 1770 aaPredicted RBP14.17□□□□□ -0.14
TUBE1-210ENST00000604967 PELP1Q8IZL8 1130 aaKnown RBP14.16□□□□□ -0.14
TUBE1-210ENST00000604967 TRIM35Q9UPQ4 493 aa14.16□□□□□ -0.14
TUBE1-210ENST00000604967 A0A0G2JLW4 131 aa14.15□□□□□ -0.14
TUBE1-210ENST00000604967 TBC1D2BQ9UPU7 963 aa14.15□□□□□ -0.14
TUBE1-210ENST00000604967 SCN7AQ01118 1682 aa14.14□□□□□ -0.15
TUBE1-210ENST00000604967 CARMIL3Q8ND23 1372 aa14.14□□□□□ -0.15
TUBE1-210ENST00000604967 AFDNP55196 1824 aaKnown RBP14.14□□□□□ -0.15
TUBE1-210ENST00000604967 ZNF316A6NFI3 1004 aaPredicted RBP14.14□□□□□ -0.15
TUBE1-210ENST00000604967 CAMTA2O94983 1202 aa14.14□□□□□ -0.15
TUBE1-210ENST00000604967 STARD3NLO95772 234 aa14.14□□□□□ -0.15
TUBE1-210ENST00000604967 DPEP1P16444 411 aa14.14□□□□□ -0.15
TUBE1-210ENST00000604967 RIPK4P57078 832 aa14.14□□□□□ -0.15
TUBE1-210ENST00000604967 EIF4A1P60842 406 aaKnown RBP14.14□□□□□ -0.15
TUBE1-210ENST00000604967 NRXN2Q9P2S2 1712 aa14.14□□□□□ -0.15
TUBE1-210ENST00000604967 IL6STP40189 918 aaPredicted RBP14.13□□□□□ -0.15
TUBE1-210ENST00000604967 TBC1D9BQ66K14 1250 aa14.13□□□□□ -0.15
TUBE1-210ENST00000604967 ZPR1O75312 459 aa14.12□□□□□ -0.15
TUBE1-210ENST00000604967 GIGYF1O75420 1035 aaPredicted RBP14.12□□□□□ -0.15
TUBE1-210ENST00000604967 SNRPA1P09661 255 aaKnown RBP14.12□□□□□ -0.15
TUBE1-210ENST00000604967 CHRNA5P30532 468 aa14.12□□□□□ -0.15
TUBE1-210ENST00000604967 TEX13AQ9BXU3 409 aaPredicted RBP14.12□□□□□ -0.15
TUBE1-210ENST00000604967 PARP3Q9Y6F1 533 aa14.12□□□□□ -0.15
TUBE1-210ENST00000604967 BRCA1P38398 1863 aaKnown RBP14.12□□□□□ -0.15
TUBE1-210ENST00000604967 MAPK8IP3Q9UPT6 1336 aa14.12□□□□□ -0.15
TUBE1-210ENST00000604967 KRT24Q2M2I5 525 aa14.11□□□□□ -0.15
TUBE1-210ENST00000604967 ZNF784Q8NCA9 323 aaPredicted RBP14.11□□□□□ -0.15
TUBE1-210ENST00000604967 RUNDC1Q96C34 613 aa14.11□□□□□ -0.15
TUBE1-210ENST00000604967 ZNF330Q9Y3S2 320 aaPredicted RBP14.11□□□□□ -0.15
TUBE1-210ENST00000604967 BCORQ6W2J9 1755 aa14.11□□□□□ -0.15
TUBE1-210ENST00000604967 CHD4Q14839 1912 aa14.1□□□□□ -0.15
TUBE1-210ENST00000604967 LAMB4A4D0S4 1761 aa14.1□□□□□ -0.15
TUBE1-210ENST00000604967 SENP3-EIF4A1A0A087X0R7 540 aa14.1□□□□□ -0.15
TUBE1-210ENST00000604967 NEUROD2Q15784 382 aa14.1□□□□□ -0.15
TUBE1-210ENST00000604967 BICDL1Q6ZP65 573 aa14.1□□□□□ -0.15
TUBE1-210ENST00000604967 LRP10Q7Z4F1 713 aa14.1□□□□□ -0.15
TUBE1-210ENST00000604967 CCDC24Q8N4L8 307 aa14.1□□□□□ -0.15
TUBE1-210ENST00000604967 DCAF8L1A6NGE4 600 aa14.09□□□□□ -0.15
TUBE1-210ENST00000604967 SERPINB2P05120 415 aa14.09□□□□□ -0.15
TUBE1-210ENST00000604967 TGFB2P61812 414 aa14.09□□□□□ -0.15
TUBE1-210ENST00000604967 ANKRD31Q8N7Z5 1873 aa14.08□□□□□ -0.16
TUBE1-210ENST00000604967 PDIA6Q15084 440 aa14.08□□□□□ -0.16
TUBE1-210ENST00000604967 HLFQ16534 295 aa14.08□□□□□ -0.16
TUBE1-210ENST00000604967 PROSER3Q2NL68 480 aa14.08□□□□□ -0.16
TUBE1-210ENST00000604967 A0A087WZG4 1122 aa14.07□□□□□ -0.16
TUBE1-210ENST00000604967 CHL1O00533 1208 aa14.07□□□□□ -0.16
TUBE1-210ENST00000604967 NEFMP07197 916 aa14.07□□□□□ -0.16
TUBE1-210ENST00000604967 WDR43Q15061 677 aaKnown RBP eCLIP14.07□□□□□ -0.16
TUBE1-210ENST00000604967 TTLL7Q6ZT98 887 aa14.07□□□□□ -0.16
TUBE1-210ENST00000604967 DZIP3Q86Y13 1208 aaKnown RBP14.07□□□□□ -0.16
TUBE1-210ENST00000604967 PNNQ9H307 717 aaKnown RBP14.07□□□□□ -0.16
TUBE1-210ENST00000604967 ADCY9O60503 1353 aa14.07□□□□□ -0.16
TUBE1-210ENST00000604967 APAF1O14727 1248 aa14.06□□□□□ -0.16
TUBE1-210ENST00000604967 PRR5LQ6MZQ0 368 aa14.06□□□□□ -0.16
TUBE1-210ENST00000604967 PNISRQ8TF01 805 aaKnown RBP14.06□□□□□ -0.16
TUBE1-210ENST00000604967 TSPYL4Q9UJ04 414 aa14.06□□□□□ -0.16
TUBE1-210ENST00000604967 COL11A2P13942 1736 aaPredicted RBP14.05□□□□□ -0.16
TUBE1-210ENST00000604967 GRIN3BO60391 1043 aa14.05□□□□□ -0.16
TUBE1-210ENST00000604967 ANXA1P04083 346 aa14.05□□□□□ -0.16
TUBE1-210ENST00000604967 BCS1LQ9Y276 419 aa14.05□□□□□ -0.16
TUBE1-210ENST00000604967 ZNF853P0CG23 659 aa14.04□□□□□ -0.16
TUBE1-210ENST00000604967 PRELPP51888 382 aa14.04□□□□□ -0.16
TUBE1-210ENST00000604967 NGEFQ8N5V2 710 aa14.04□□□□□ -0.16
TUBE1-210ENST00000604967 MYL6BP14649 208 aa14.03□□□□□ -0.16
TUBE1-210ENST00000604967 DLEC1Q9Y238 1755 aa14.03□□□□□ -0.16
TUBE1-210ENST00000604967 NECTIN2Q92692 538 aa14.02□□□□□ -0.17
TUBE1-210ENST00000604967 BABAM1Q9NWV8 329 aa14.02□□□□□ -0.17
TUBE1-210ENST00000604967 ARFGEF1Q9Y6D6 1849 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 458.4 ms