RNA–Protein interactions for RNA: ENST00000604922.1

SH3D19-213, Transcript of SH3 domain containing 19, humanhuman

TSL 2

Gene SH3D19, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-213ENST00000604922 RUBCNLQ9H714 662 aa10.09□□□□□ -0.79
SH3D19-213ENST00000604922 CHMP3Q9Y3E7 222 aa10.09□□□□□ -0.79
SH3D19-213ENST00000604922 SFI1A8K8P3 1242 aa10.08□□□□□ -0.8
SH3D19-213ENST00000604922 SLC9A9Q8IVB4 645 aa10.08□□□□□ -0.8
SH3D19-213ENST00000604922 USP3Q9Y6I4 520 aa10.08□□□□□ -0.8
SH3D19-213ENST00000604922 USP17L15C9J2P7 530 aa10.07□□□□□ -0.8
SH3D19-213ENST00000604922 USP17L10C9JJH3 530 aa10.07□□□□□ -0.8
SH3D19-213ENST00000604922 USP17L13C9JLJ4 530 aa10.07□□□□□ -0.8
SH3D19-213ENST00000604922 USP17L12C9JPN9 530 aa10.07□□□□□ -0.8
SH3D19-213ENST00000604922 USP17L11C9JVI0 530 aa10.07□□□□□ -0.8
SH3D19-213ENST00000604922 USP17L21D6R901 530 aa10.07□□□□□ -0.8
SH3D19-213ENST00000604922 USP17L18D6R9N7 530 aa10.07□□□□□ -0.8
SH3D19-213ENST00000604922 USP17L22D6RA61 530 aa10.07□□□□□ -0.8
SH3D19-213ENST00000604922 USP17L17D6RBQ6 530 aa10.07□□□□□ -0.8
SH3D19-213ENST00000604922 USP17L19D6RCP7 530 aa10.07□□□□□ -0.8
SH3D19-213ENST00000604922 USP17L20D6RJB6 530 aa10.07□□□□□ -0.8
SH3D19-213ENST00000604922 EPHA4P54764 986 aa10.07□□□□□ -0.8
SH3D19-213ENST00000604922 FOXK2Q01167 660 aa10.07□□□□□ -0.8
SH3D19-213ENST00000604922 USP17L24Q0WX57 530 aa10.07□□□□□ -0.8
SH3D19-213ENST00000604922 PTK7Q13308 1070 aa10.07□□□□□ -0.8
SH3D19-213ENST00000604922 CRTC2Q53ET0 693 aaPredicted RBP10.07□□□□□ -0.8
SH3D19-213ENST00000604922 ERICH6Q7L0X2 663 aa10.07□□□□□ -0.8
SH3D19-213ENST00000604922 ZDHHC3Q9NYG2 299 aa10.07□□□□□ -0.8
SH3D19-213ENST00000604922 GPR25O00155 361 aa10.06□□□□□ -0.8
SH3D19-213ENST00000604922 DKK1O94907 266 aa10.06□□□□□ -0.8
SH3D19-213ENST00000604922 DPYDQ12882 1025 aa10.06□□□□□ -0.8
SH3D19-213ENST00000604922 TEAD4Q15561 434 aa10.06□□□□□ -0.8
SH3D19-213ENST00000604922 ARSJQ5FYB0 599 aaPredicted RBP10.06□□□□□ -0.8
SH3D19-213ENST00000604922 ANKMY2Q8IV38 441 aa10.06□□□□□ -0.8
SH3D19-213ENST00000604922 TSEN2Q8NCE0 465 aaKnown RBP10.06□□□□□ -0.8
SH3D19-213ENST00000604922 L3MBTL2Q969R5 705 aa10.06□□□□□ -0.8
SH3D19-213ENST00000604922 CRISPLD1Q9H336 500 aa10.06□□□□□ -0.8
SH3D19-213ENST00000604922 SERPINA10Q9UK55 444 aa10.06□□□□□ -0.8
SH3D19-213ENST00000604922 ZNF232Q9UNY5 417 aa10.06□□□□□ -0.8
SH3D19-213ENST00000604922 PHF24Q9UPV7 400 aa10.06□□□□□ -0.8
SH3D19-213ENST00000604922 NOS2P35228 1153 aa10.05□□□□□ -0.8
SH3D19-213ENST00000604922 KRT76Q01546 638 aa10.05□□□□□ -0.8
SH3D19-213ENST00000604922 RNFT1Q5M7Z0 435 aa10.05□□□□□ -0.8
SH3D19-213ENST00000604922 TBCELQ5QJ74 424 aa10.05□□□□□ -0.8
SH3D19-213ENST00000604922 ZNF295-AS1Q8N0V1 137 aa10.05□□□□□ -0.8
SH3D19-213ENST00000604922 HINFPQ9BQA5 517 aa10.05□□□□□ -0.8
SH3D19-213ENST00000604922 PARP3Q9Y6F1 533 aa10.05□□□□□ -0.8
SH3D19-213ENST00000604922 SERTM1A2A2V5 107 aa10.04□□□□□ -0.8
SH3D19-213ENST00000604922 PSMA6P60900 246 aaKnown RBP10.04□□□□□ -0.8
SH3D19-213ENST00000604922 CDCA8Q53HL2 280 aa10.04□□□□□ -0.8
SH3D19-213ENST00000604922 FIGNL1Q6PIW4 674 aa10.04□□□□□ -0.8
SH3D19-213ENST00000604922 TSPAN10Q9H1Z9 355 aaPredicted RBP10.04□□□□□ -0.8
SH3D19-213ENST00000604922 ARID3CA6NKF2 412 aa10.03□□□□□ -0.8
SH3D19-213ENST00000604922 ATP4AP20648 1035 aa10.03□□□□□ -0.8
SH3D19-213ENST00000604922 BICDL1Q6ZP65 573 aa10.03□□□□□ -0.8
SH3D19-213ENST00000604922 FAM200AQ8TCP9 573 aa10.03□□□□□ -0.8
SH3D19-213ENST00000604922 CFHR5Q9BXR6 569 aa10.03□□□□□ -0.8
SH3D19-213ENST00000604922 MBIPQ9NS73 344 aa10.03□□□□□ -0.8
SH3D19-213ENST00000604922 NSFL1CQ9UNZ2 370 aaKnown RBP10.03□□□□□ -0.8
SH3D19-213ENST00000604922 GJA3Q9Y6H8 435 aa10.03□□□□□ -0.8
SH3D19-213ENST00000604922 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.02□□□□□ -0.81
SH3D19-213ENST00000604922 NLRP8Q86W28 1048 aa10.02□□□□□ -0.81
SH3D19-213ENST00000604922 GAS2L2Q8NHY3 880 aa10.02□□□□□ -0.81
SH3D19-213ENST00000604922 ATAD2Q6PL18 1390 aa10.01□□□□□ -0.81
SH3D19-213ENST00000604922 PPP1R12BO60237 982 aaPredicted RBP10.01□□□□□ -0.81
SH3D19-213ENST00000604922 MX2P20592 715 aa10.01□□□□□ -0.81
SH3D19-213ENST00000604922 SRSF11Q05519 484 aaKnown RBP10.01□□□□□ -0.81
SH3D19-213ENST00000604922 GAS6Q14393 721 aa10.01□□□□□ -0.81
SH3D19-213ENST00000604922 ZDHHC1Q8WTX9 485 aa10.01□□□□□ -0.81
SH3D19-213ENST00000604922 NEUROD4Q9HD90 331 aa10.01□□□□□ -0.81
SH3D19-213ENST00000604922 A0A1W2PNR3 127 aa10□□□□□ -0.81
SH3D19-213ENST00000604922 TXLNAP40222 546 aa10□□□□□ -0.81
SH3D19-213ENST00000604922 TMEM151AQ8N4L1 468 aa10□□□□□ -0.81
SH3D19-213ENST00000604922 SCG3Q8WXD2 468 aaKnown RBP10□□□□□ -0.81
SH3D19-213ENST00000604922 THBS1P07996 1170 aa9.99□□□□□ -0.81
SH3D19-213ENST00000604922 SLURP2P0DP57 97 aa9.99□□□□□ -0.81
SH3D19-213ENST00000604922 CHMP7Q8WUX9 453 aaPredicted RBP9.99□□□□□ -0.81
SH3D19-213ENST00000604922 ZIC5Q96T25 663 aa9.99□□□□□ -0.81
SH3D19-213ENST00000604922 ATXN7L1Q9ULK2 861 aaPredicted RBP9.99□□□□□ -0.81
SH3D19-213ENST00000604922 NOVA2Q9UNW9 492 aaKnown RBP9.99□□□□□ -0.81
SH3D19-213ENST00000604922 PCDHGC4Q9Y5F7 938 aa9.99□□□□□ -0.81
SH3D19-213ENST00000604922 EML1O00423 815 aa9.98□□□□□ -0.81
SH3D19-213ENST00000604922 ADAMTS2O95450 1211 aa9.98□□□□□ -0.81
SH3D19-213ENST00000604922 ARXQ96QS3 562 aa9.98□□□□□ -0.81
SH3D19-213ENST00000604922 KRTAP9-2Q9BYQ4 174 aa9.98□□□□□ -0.81
SH3D19-213ENST00000604922 ZCCHC2Q9C0B9 1178 aaKnown RBP9.98□□□□□ -0.81
SH3D19-213ENST00000604922 GPC6Q9Y625 555 aaPredicted RBP9.98□□□□□ -0.81
SH3D19-213ENST00000604922 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.97□□□□□ -0.81
SH3D19-213ENST00000604922 ATXN7O15265 892 aaPredicted RBP9.97□□□□□ -0.81
SH3D19-213ENST00000604922 GDF11O95390 407 aa9.97□□□□□ -0.81
SH3D19-213ENST00000604922 UBAP2LQ14157 1087 aaKnown RBP9.97□□□□□ -0.81
SH3D19-213ENST00000604922 C1orf53Q5VUE5 145 aa9.97□□□□□ -0.81
SH3D19-213ENST00000604922 STAG2Q8N3U4 1231 aa9.97□□□□□ -0.81
SH3D19-213ENST00000604922 RHPN1Q8TCX5 695 aa9.97□□□□□ -0.81
SH3D19-213ENST00000604922 HCN4Q9Y3Q4 1203 aa9.97□□□□□ -0.81
SH3D19-213ENST00000604922 IGF1RP08069 1367 aa9.97□□□□□ -0.81
SH3D19-213ENST00000604922 IGFBP4P22692 258 aa9.96□□□□□ -0.82
SH3D19-213ENST00000604922 HIRAP54198 1017 aaPredicted RBP9.96□□□□□ -0.82
SH3D19-213ENST00000604922 RASSF7Q02833 373 aa9.96□□□□□ -0.82
SH3D19-213ENST00000604922 PBXIP1Q96AQ6 731 aa9.96□□□□□ -0.82
SH3D19-213ENST00000604922 ABHD17AQ96GS6 310 aa9.96□□□□□ -0.82
SH3D19-213ENST00000604922 C21orf2O43822 256 aa9.95□□□□□ -0.82
SH3D19-213ENST00000604922 BNIP3LO60238 219 aa9.95□□□□□ -0.82
SH3D19-213ENST00000604922 MAP2K3P46734 347 aa9.95□□□□□ -0.82
SH3D19-213ENST00000604922 ELOAQ14241 798 aaKnown RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms