RNA–Protein interactions for RNA: ENST00000602897.1

PPFIA3-212, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 1,615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-212ENST00000602897 TNNQ9UQP3 1299 aa28.37■■■□□ 2.13
PPFIA3-212ENST00000602897 STK32BQ9NY57 414 aa28.36■■■□□ 2.13
PPFIA3-212ENST00000602897 HOXB7P09629 217 aa28.36■■■□□ 2.13
PPFIA3-212ENST00000602897 KRT24Q2M2I5 525 aa28.36■■■□□ 2.13
PPFIA3-212ENST00000602897 LRRC4BQ9NT99 713 aa28.36■■■□□ 2.13
PPFIA3-212ENST00000602897 SLC27A3Q5K4L6 730 aa28.35■■■□□ 2.13
PPFIA3-212ENST00000602897 PTPRCP08575 1304 aa28.34■■■□□ 2.13
PPFIA3-212ENST00000602897 KDM2BQ8NHM5 1336 aa28.34■■■□□ 2.13
PPFIA3-212ENST00000602897 KDM3BQ7LBC6 1761 aa28.34■■■□□ 2.13
PPFIA3-212ENST00000602897 SLC15A2Q16348 729 aa28.33■■■□□ 2.13
PPFIA3-212ENST00000602897 CCDC30Q5VVM6 783 aa28.33■■■□□ 2.13
PPFIA3-212ENST00000602897 TOGARAM1Q9Y4F4 1720 aa28.32■■■□□ 2.12
PPFIA3-212ENST00000602897 VIRMAQ69YN4 1812 aaKnown RBP28.32■■■□□ 2.12
PPFIA3-212ENST00000602897 BTBD11A6QL63 1104 aa28.32■■■□□ 2.12
PPFIA3-212ENST00000602897 KCNQ4P56696 695 aa28.32■■■□□ 2.12
PPFIA3-212ENST00000602897 ABCC4O15439 1325 aa28.31■■■□□ 2.12
PPFIA3-212ENST00000602897 TMEM57Q8N5G2 664 aa28.31■■■□□ 2.12
PPFIA3-212ENST00000602897 PIGBQ92521 554 aa28.31■■■□□ 2.12
PPFIA3-212ENST00000602897 DCAF5Q96JK2 942 aa28.31■■■□□ 2.12
PPFIA3-212ENST00000602897 EIF4A1P60842 406 aaKnown RBP28.3■■■□□ 2.12
PPFIA3-212ENST00000602897 ITPRIPQ8IWB1 547 aa28.3■■■□□ 2.12
PPFIA3-212ENST00000602897 STK31Q9BXU1 1019 aa28.3■■■□□ 2.12
PPFIA3-212ENST00000602897 TMOD3Q9NYL9 352 aa28.3■■■□□ 2.12
PPFIA3-212ENST00000602897 CCNL1Q9UK58 526 aaPredicted RBP28.29■■■□□ 2.12
PPFIA3-212ENST00000602897 SIPA1L3O60292 1781 aaPredicted RBP28.29■■■□□ 2.12
PPFIA3-212ENST00000602897 SCN11AQ9UI33 1791 aa28.29■■■□□ 2.12
PPFIA3-212ENST00000602897 TCERG1O14776 1098 aaKnown RBP28.28■■■□□ 2.12
PPFIA3-212ENST00000602897 SLC4A2P04920 1241 aa28.28■■■□□ 2.12
PPFIA3-212ENST00000602897 CACNA1FO60840 1977 aa28.27■■■□□ 2.12
PPFIA3-212ENST00000602897 PALLDQ8WX93 1383 aa28.27■■■□□ 2.12
PPFIA3-212ENST00000602897 SMARCC1Q92922 1105 aaPredicted RBP28.27■■■□□ 2.12
PPFIA3-212ENST00000602897 LRP5O75197 1615 aa28.27■■■□□ 2.12
PPFIA3-212ENST00000602897 PAPPAQ13219 1627 aa28.26■■■□□ 2.12
PPFIA3-212ENST00000602897 ZNF827Q17R98 1081 aa28.26■■■□□ 2.11
PPFIA3-212ENST00000602897 SLC52A2Q9HAB3 445 aa28.26■■■□□ 2.11
PPFIA3-212ENST00000602897 ITGB4P16144 1822 aa28.26■■■□□ 2.11
PPFIA3-212ENST00000602897 KDM6AO15550 1401 aaPredicted RBP28.26■■■□□ 2.11
PPFIA3-212ENST00000602897 LY75O60449 1722 aa28.25■■■□□ 2.11
PPFIA3-212ENST00000602897 PDGFDQ9GZP0 370 aaPredicted RBP28.25■■■□□ 2.11
PPFIA3-212ENST00000602897 ERVV-2B6SEH9 535 aa28.25■■■□□ 2.11
PPFIA3-212ENST00000602897 ZBTB40Q9NUA8 1239 aa28.25■■■□□ 2.11
PPFIA3-212ENST00000602897 MRC1P22897 1456 aa28.24■■■□□ 2.11
PPFIA3-212ENST00000602897 INTS3Q68E01 1043 aaKnown RBP28.23■■■□□ 2.11
PPFIA3-212ENST00000602897 RWDD1Q9H446 243 aaPredicted RBP28.23■■■□□ 2.11
PPFIA3-212ENST00000602897 HEG1Q9ULI3 1381 aa28.23■■■□□ 2.11
PPFIA3-212ENST00000602897 AKT1S1Q96B36 256 aa28.22■■■□□ 2.11
PPFIA3-212ENST00000602897 SPON1Q9HCB6 807 aa28.21■■■□□ 2.11
PPFIA3-212ENST00000602897 ASAP1Q9ULH1 1129 aa28.21■■■□□ 2.11
PPFIA3-212ENST00000602897 HDGFL1Q5TGJ6 251 aa28.21■■■□□ 2.11
PPFIA3-212ENST00000602897 PCDHB15Q9Y5E8 787 aa28.21■■■□□ 2.11
PPFIA3-212ENST00000602897 ZBTB7BO15156 539 aaPredicted RBP28.2■■■□□ 2.1
PPFIA3-212ENST00000602897 CABP4P57796 275 aa28.2■■■□□ 2.1
PPFIA3-212ENST00000602897 TFCP2L1Q9NZI6 479 aa28.19■■■□□ 2.1
PPFIA3-212ENST00000602897 ZBTB7AO95365 584 aa28.18■■■□□ 2.1
PPFIA3-212ENST00000602897 TSHZ2Q9NRE2 1034 aa28.18■■■□□ 2.1
PPFIA3-212ENST00000602897 CASZ1Q86V15 1759 aa28.18■■■□□ 2.1
PPFIA3-212ENST00000602897 IGHDP01880 384 aa28.18■■■□□ 2.1
PPFIA3-212ENST00000602897 ATG3Q9NT62 314 aa28.18■■■□□ 2.1
PPFIA3-212ENST00000602897 KCNQ3O43525 872 aa28.17■■■□□ 2.1
PPFIA3-212ENST00000602897 HDAC1Q13547 482 aaPredicted RBP28.17■■■□□ 2.1
PPFIA3-212ENST00000602897 HMGB2P26583 209 aaKnown RBP28.16■■■□□ 2.1
PPFIA3-212ENST00000602897 ZNF790Q6PG37 636 aa28.16■■■□□ 2.1
PPFIA3-212ENST00000602897 NFATC2IPQ8NCF5 419 aa28.16■■■□□ 2.1
PPFIA3-212ENST00000602897 LOC102724428A0A0B4J2F2 783 aa28.15■■■□□ 2.1
PPFIA3-212ENST00000602897 GIGYF1O75420 1035 aaPredicted RBP28.15■■■□□ 2.1
PPFIA3-212ENST00000602897 SIK1P57059 783 aa28.15■■■□□ 2.1
PPFIA3-212ENST00000602897 FLIIQ13045 1269 aa28.14■■■□□ 2.1
PPFIA3-212ENST00000602897 CCT4P50991 539 aaKnown RBP28.14■■■□□ 2.09
PPFIA3-212ENST00000602897 ATF5Q9Y2D1 282 aaPredicted RBP28.14■■■□□ 2.09
PPFIA3-212ENST00000602897 G2E3Q7L622 706 aa28.13■■■□□ 2.09
PPFIA3-212ENST00000602897 PNPLA7Q6ZV29 1317 aa28.12■■■□□ 2.09
PPFIA3-212ENST00000602897 MTFR1LQ9H019 292 aa28.11■■■□□ 2.09
PPFIA3-212ENST00000602897 DBF4Q9UBU7 674 aaPredicted RBP28.11■■■□□ 2.09
PPFIA3-212ENST00000602897 PPP1R1BQ9UD71 204 aaPredicted RBP28.1■■■□□ 2.09
PPFIA3-212ENST00000602897 ATP6V1AP38606 617 aa28.1■■■□□ 2.09
PPFIA3-212ENST00000602897 TTC5Q8N0Z6 440 aa28.1■■■□□ 2.09
PPFIA3-212ENST00000602897 C5P01031 1676 aa28.09■■■□□ 2.09
PPFIA3-212ENST00000602897 EIF2S2P20042 333 aaKnown RBP28.09■■■□□ 2.09
PPFIA3-212ENST00000602897 RBM42Q9BTD8 480 aaKnown RBP28.09■■■□□ 2.09
PPFIA3-212ENST00000602897 PXDNLA1KZ92 1463 aa28.09■■■□□ 2.09
PPFIA3-212ENST00000602897 FKBP5Q13451 457 aaPredicted RBP28.08■■■□□ 2.09
PPFIA3-212ENST00000602897 ITPK1Q13572 414 aa28.07■■■□□ 2.08
PPFIA3-212ENST00000602897 NECTIN2Q92692 538 aa28.07■■■□□ 2.08
PPFIA3-212ENST00000602897 LINC00116Q8NCU8 138 aa28.07■■■□□ 2.08
PPFIA3-212ENST00000602897 SLC16A10Q8TF71 515 aa28.07■■■□□ 2.08
PPFIA3-212ENST00000602897 AK7Q96M32 723 aa28.07■■■□□ 2.08
PPFIA3-212ENST00000602897 MSH5O43196 834 aa28.06■■■□□ 2.08
PPFIA3-212ENST00000602897 PTGER2P43116 358 aa28.06■■■□□ 2.08
PPFIA3-212ENST00000602897 FMNL2Q96PY5 1086 aa28.06■■■□□ 2.08
PPFIA3-212ENST00000602897 CHPF2Q9P2E5 772 aa28.05■■■□□ 2.08
PPFIA3-212ENST00000602897 TAF1LQ8IZX4 1826 aa28.05■■■□□ 2.08
PPFIA3-212ENST00000602897 PTCD1O75127 700 aaKnown RBP28.04■■■□□ 2.08
PPFIA3-212ENST00000602897 SNRPA1P09661 255 aaKnown RBP28.04■■■□□ 2.08
PPFIA3-212ENST00000602897 SLC39A6Q13433 755 aa28.04■■■□□ 2.08
PPFIA3-212ENST00000602897 SLC4A9Q96Q91 983 aa28.04■■■□□ 2.08
PPFIA3-212ENST00000602897 HYPKQ9NX55 129 aa28.04■■■□□ 2.08
PPFIA3-212ENST00000602897 C4BP0C0L5 1744 aa28.04■■■□□ 2.08
PPFIA3-212ENST00000602897 QSER1Q2KHR3 1735 aa28.04■■■□□ 2.08
PPFIA3-212ENST00000602897 COL23A1Q86Y22 540 aaPredicted RBP28.03■■■□□ 2.08
PPFIA3-212ENST00000602897 TUBGCP6Q96RT7 1819 aa28.03■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms