RNA–Protein interactions for RNA: ENST00000602660.1

SFXN2-208, Transcript of sideroflexin 2, humanhuman

TSL 2

Gene SFXN2, Length 667 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN2-208ENST00000602660 BTBD11A6QL63 1104 aa21.2■□□□□ 0.98
SFXN2-208ENST00000602660 MMP10P09238 476 aa21.2■□□□□ 0.98
SFXN2-208ENST00000602660 RTF1Q92541 710 aaKnown RBP21.2■□□□□ 0.98
SFXN2-208ENST00000602660 CD2APQ9Y5K6 639 aa21.2■□□□□ 0.98
SFXN2-208ENST00000602660 NFE2L2Q16236 605 aa21.19■□□□□ 0.98
SFXN2-208ENST00000602660 ARFGEF1Q9Y6D6 1849 aa21.19■□□□□ 0.98
SFXN2-208ENST00000602660 COL15A1P39059 1388 aa21.19■□□□□ 0.98
SFXN2-208ENST00000602660 NLGN1Q8N2Q7 840 aa21.18■□□□□ 0.98
SFXN2-208ENST00000602660 DLEC1Q9Y238 1755 aa21.18■□□□□ 0.98
SFXN2-208ENST00000602660 ANKRD31Q8N7Z5 1873 aa21.18■□□□□ 0.98
SFXN2-208ENST00000602660 FMNL2Q96PY5 1086 aa21.17■□□□□ 0.98
SFXN2-208ENST00000602660 C10orf71Q711Q0 1435 aa21.17■□□□□ 0.98
SFXN2-208ENST00000602660 NUP98P52948 1817 aa21.17■□□□□ 0.98
SFXN2-208ENST00000602660 DCAF8L1A6NGE4 600 aa21.16■□□□□ 0.98
SFXN2-208ENST00000602660 FKBP8Q14318 412 aa21.16■□□□□ 0.98
SFXN2-208ENST00000602660 MAPK8IP3Q9UPT6 1336 aa21.15■□□□□ 0.98
SFXN2-208ENST00000602660 THUMPD2Q9BTF0 503 aaKnown RBP21.15■□□□□ 0.98
SFXN2-208ENST00000602660 PRAMEF22A3QJZ6 481 aa21.14■□□□□ 0.97
SFXN2-208ENST00000602660 STARD3NLO95772 234 aa21.14■□□□□ 0.97
SFXN2-208ENST00000602660 NEFMP07197 916 aa21.14■□□□□ 0.97
SFXN2-208ENST00000602660 YBX3P16989 372 aaKnown RBP eCLIP21.14■□□□□ 0.97
SFXN2-208ENST00000602660 EIF5P55010 431 aaKnown RBP21.14■□□□□ 0.97
SFXN2-208ENST00000602660 TAF7Q15545 349 aaPredicted RBP21.14■□□□□ 0.97
SFXN2-208ENST00000602660 PNNQ9H307 717 aaKnown RBP21.14■□□□□ 0.97
SFXN2-208ENST00000602660 PXDNLA1KZ92 1463 aa21.13■□□□□ 0.97
SFXN2-208ENST00000602660 CANXP27824 592 aaKnown RBP21.13■□□□□ 0.97
SFXN2-208ENST00000602660 DDR1Q08345 913 aa21.13■□□□□ 0.97
SFXN2-208ENST00000602660 TEX13AQ9BXU3 409 aaPredicted RBP21.13■□□□□ 0.97
SFXN2-208ENST00000602660 BCL2L12Q9HB09 334 aa21.13■□□□□ 0.97
SFXN2-208ENST00000602660 NARFQ9UHQ1 456 aa21.13■□□□□ 0.97
SFXN2-208ENST00000602660 A1BGP04217 495 aa21.12■□□□□ 0.97
SFXN2-208ENST00000602660 USPL1Q5W0Q7 1092 aa21.12■□□□□ 0.97
SFXN2-208ENST00000602660 MIS18AQ9NYP9 233 aa21.12■□□□□ 0.97
SFXN2-208ENST00000602660 USP16Q9Y5T5 823 aa21.12■□□□□ 0.97
SFXN2-208ENST00000602660 ZNF316A6NFI3 1004 aaPredicted RBP21.11■□□□□ 0.97
SFXN2-208ENST00000602660 TM4SF1P30408 202 aa21.11■□□□□ 0.97
SFXN2-208ENST00000602660 GPR162Q16538 588 aa21.11■□□□□ 0.97
SFXN2-208ENST00000602660 CACNA1SQ13698 1873 aa21.11■□□□□ 0.97
SFXN2-208ENST00000602660 YY1P25490 414 aa21.1■□□□□ 0.97
SFXN2-208ENST00000602660 TMPOP42166 694 aaKnown RBP21.1■□□□□ 0.97
SFXN2-208ENST00000602660 CCDC146Q8IYE0 955 aa21.1■□□□□ 0.97
SFXN2-208ENST00000602660 ADAMTS8Q9UP79 889 aa21.1■□□□□ 0.97
SFXN2-208ENST00000602660 SBF1O95248 1867 aa21.09■□□□□ 0.97
SFXN2-208ENST00000602660 CCDC88AQ3V6T2 1871 aa21.09■□□□□ 0.97
SFXN2-208ENST00000602660 ZPR1O75312 459 aa21.09■□□□□ 0.97
SFXN2-208ENST00000602660 SNRPA1P09661 255 aaKnown RBP21.09■□□□□ 0.97
SFXN2-208ENST00000602660 POLRMTO00411 1230 aaKnown RBP21.08■□□□□ 0.97
SFXN2-208ENST00000602660 IL6STP40189 918 aaPredicted RBP21.08■□□□□ 0.97
SFXN2-208ENST00000602660 RIPK4P57078 832 aa21.08■□□□□ 0.97
SFXN2-208ENST00000602660 PELP1Q8IZL8 1130 aaKnown RBP21.08■□□□□ 0.97
SFXN2-208ENST00000602660 PARP3Q9Y6F1 533 aa21.08■□□□□ 0.97
SFXN2-208ENST00000602660 COL11A2P13942 1736 aaPredicted RBP21.07■□□□□ 0.96
SFXN2-208ENST00000602660 PIP4K2AP48426 406 aaPredicted RBP21.07■□□□□ 0.96
SFXN2-208ENST00000602660 NFIXQ14938 502 aa21.07■□□□□ 0.96
SFXN2-208ENST00000602660 WDR43Q15061 677 aaKnown RBP eCLIP21.06■□□□□ 0.96
SFXN2-208ENST00000602660 CCDC184Q52MB2 194 aa21.06■□□□□ 0.96
SFXN2-208ENST00000602660 RUNDC1Q96C34 613 aa21.06■□□□□ 0.96
SFXN2-208ENST00000602660 RRP7AQ9Y3A4 280 aaKnown RBP21.06■□□□□ 0.96
SFXN2-208ENST00000602660 NBPF26B4DH59 902 aa21.05■□□□□ 0.96
SFXN2-208ENST00000602660 EIF4A1P60842 406 aaKnown RBP21.05■□□□□ 0.96
SFXN2-208ENST00000602660 NBPF10Q6P3W6 841 aaKnown RBP21.05■□□□□ 0.96
SFXN2-208ENST00000602660 NBPF15Q8N660 670 aa21.05■□□□□ 0.96
SFXN2-208ENST00000602660 PNISRQ8TF01 805 aaKnown RBP21.05■□□□□ 0.96
SFXN2-208ENST00000602660 A0A087WZG4 1122 aa21.04■□□□□ 0.96
SFXN2-208ENST00000602660 TRIM35Q9UPQ4 493 aa21.04■□□□□ 0.96
SFXN2-208ENST00000602660 TBC1D2BQ9UPU7 963 aa21.04■□□□□ 0.96
SFXN2-208ENST00000602660 GIGYF1O75420 1035 aaPredicted RBP21.03■□□□□ 0.96
SFXN2-208ENST00000602660 CAMTA2O94983 1202 aa21.03■□□□□ 0.96
SFXN2-208ENST00000602660 TGFB2P61812 414 aa21.03■□□□□ 0.96
SFXN2-208ENST00000602660 WWC3Q9ULE0 1092 aa21.03■□□□□ 0.96
SFXN2-208ENST00000602660 ANKRD36CQ5JPF3 1778 aa21.02■□□□□ 0.96
SFXN2-208ENST00000602660 ARFGEF2Q9Y6D5 1785 aa21.02■□□□□ 0.96
SFXN2-208ENST00000602660 ZNF330Q9Y3S2 320 aaPredicted RBP21.02■□□□□ 0.96
SFXN2-208ENST00000602660 A0A0G2JLW4 131 aa21.01■□□□□ 0.95
SFXN2-208ENST00000602660 GRIN3BO60391 1043 aa21.01■□□□□ 0.95
SFXN2-208ENST00000602660 DPEP1P16444 411 aa21.01■□□□□ 0.95
SFXN2-208ENST00000602660 KCNA3P22001 575 aa21.01■□□□□ 0.95
SFXN2-208ENST00000602660 NEUROD2Q15784 382 aa21.01■□□□□ 0.95
SFXN2-208ENST00000602660 CARMIL3Q8ND23 1372 aa21■□□□□ 0.95
SFXN2-208ENST00000602660 LMOD3Q0VAK6 560 aa21■□□□□ 0.95
SFXN2-208ENST00000602660 TBC1D9BQ66K14 1250 aa21■□□□□ 0.95
SFXN2-208ENST00000602660 SERPINB2P05120 415 aa20.98■□□□□ 0.95
SFXN2-208ENST00000602660 DZIP3Q86Y13 1208 aaKnown RBP20.98■□□□□ 0.95
SFXN2-208ENST00000602660 BABAM1Q9NWV8 329 aa20.98■□□□□ 0.95
SFXN2-208ENST00000602660 TSPYL4Q9UJ04 414 aa20.98■□□□□ 0.95
SFXN2-208ENST00000602660 BICDL1Q6ZP65 573 aa20.96■□□□□ 0.95
SFXN2-208ENST00000602660 SLX4Q8IY92 1834 aa20.96■□□□□ 0.95
SFXN2-208ENST00000602660 FER1L6Q2WGJ9 1857 aa20.96■□□□□ 0.95
SFXN2-208ENST00000602660 DICER1Q9UPY3 1922 aaKnown RBP20.96■□□□□ 0.95
SFXN2-208ENST00000602660 CHL1O00533 1208 aa20.95■□□□□ 0.94
SFXN2-208ENST00000602660 APAF1O14727 1248 aa20.95■□□□□ 0.94
SFXN2-208ENST00000602660 CHRNA5P30532 468 aa20.95■□□□□ 0.94
SFXN2-208ENST00000602660 ZNF784Q8NCA9 323 aaPredicted RBP20.95■□□□□ 0.94
SFXN2-208ENST00000602660 TNRC6CQ9HCJ0 1690 aaKnown RBP20.93■□□□□ 0.94
SFXN2-208ENST00000602660 CACNA1FO60840 1977 aa20.93■□□□□ 0.94
SFXN2-208ENST00000602660 KRT24Q2M2I5 525 aa20.92■□□□□ 0.94
SFXN2-208ENST00000602660 PRR5LQ6MZQ0 368 aa20.92■□□□□ 0.94
SFXN2-208ENST00000602660 CLEC4GQ6UXB4 293 aa20.92■□□□□ 0.94
SFXN2-208ENST00000602660 LRP10Q7Z4F1 713 aa20.92■□□□□ 0.94
SFXN2-208ENST00000602660 NPM2Q86SE8 214 aaKnown RBP20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms