RNA–Protein interactions for RNA: ENST00000602516.1

HCG18-244, Transcript of HLA complex group 18, humanhuman

BASIC

Gene HCG18, Length 2,890 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-244ENST00000602516 AATKQ6ZMQ8 1374 aa9.29□□□□□ -0.92
HCG18-244ENST00000602516 MARCH6O60337 910 aa9.28□□□□□ -0.92
HCG18-244ENST00000602516 FCHSD2O94868 740 aa9.28□□□□□ -0.92
HCG18-244ENST00000602516 ZNF853P0CG23 659 aa9.28□□□□□ -0.92
HCG18-244ENST00000602516 CSPP1Q1MSJ5 1256 aa9.28□□□□□ -0.92
HCG18-244ENST00000602516 NUDT16Q96DE0 195 aaKnown RBP9.28□□□□□ -0.92
HCG18-244ENST00000602516 TSPYL1Q9H0U9 437 aa9.28□□□□□ -0.92
HCG18-244ENST00000602516 ERBB3P21860 1342 aa9.28□□□□□ -0.92
HCG18-244ENST00000602516 LRRC7Q96NW7 1537 aa9.28□□□□□ -0.92
HCG18-244ENST00000602516 KRBA2Q6ZNG9 492 aa9.28□□□□□ -0.92
HCG18-244ENST00000602516 SKAP1Q86WV1 359 aa9.28□□□□□ -0.92
HCG18-244ENST00000602516 CCDC97Q96F63 343 aaPredicted RBP9.28□□□□□ -0.92
HCG18-244ENST00000602516 KDM4CQ9H3R0 1056 aa9.28□□□□□ -0.92
HCG18-244ENST00000602516 CCDC61Q9Y6R9 512 aa9.28□□□□□ -0.92
HCG18-244ENST00000602516 SLIT1O75093 1534 aa9.27□□□□□ -0.92
HCG18-244ENST00000602516 NRKQ7Z2Y5 1582 aa9.27□□□□□ -0.92
HCG18-244ENST00000602516 ROBO2Q9HCK4 1378 aa9.27□□□□□ -0.92
HCG18-244ENST00000602516 CDK12Q9NYV4 1490 aaPredicted RBP9.27□□□□□ -0.92
HCG18-244ENST00000602516 ARHGAP23Q9P227 1491 aa9.27□□□□□ -0.93
HCG18-244ENST00000602516 MAPK8IP3Q9UPT6 1336 aa9.27□□□□□ -0.93
HCG18-244ENST00000602516 CLUAP1Q96AJ1 413 aa9.27□□□□□ -0.93
HCG18-244ENST00000602516 FAM210AQ96ND0 272 aa9.27□□□□□ -0.93
HCG18-244ENST00000602516 PPFIA4O75335 1185 aa9.26□□□□□ -0.93
HCG18-244ENST00000602516 PANK1Q8TE04 598 aa9.26□□□□□ -0.93
HCG18-244ENST00000602516 LMTK3Q96Q04 1460 aa9.26□□□□□ -0.93
HCG18-244ENST00000602516 EPB41L2O43491 1005 aaKnown RBP9.26□□□□□ -0.93
HCG18-244ENST00000602516 LTKP29376 864 aa9.26□□□□□ -0.93
HCG18-244ENST00000602516 COG6Q9Y2V7 657 aa9.26□□□□□ -0.93
HCG18-244ENST00000602516 PRR36Q9H6K5 1346 aa9.26□□□□□ -0.93
HCG18-244ENST00000602516 KLHL33A6NCF5 533 aa9.26□□□□□ -0.93
HCG18-244ENST00000602516 IGHDP01880 384 aa9.26□□□□□ -0.93
HCG18-244ENST00000602516 APBB1O00213 710 aa9.25□□□□□ -0.93
HCG18-244ENST00000602516 PRKAR2AP13861 404 aaKnown RBP9.25□□□□□ -0.93
HCG18-244ENST00000602516 CCDC181Q5TID7 509 aa9.25□□□□□ -0.93
HCG18-244ENST00000602516 NME9Q86XW9 330 aa9.25□□□□□ -0.93
HCG18-244ENST00000602516 NBPF3Q9H094 633 aa9.25□□□□□ -0.93
HCG18-244ENST00000602516 VIRMAQ69YN4 1812 aaKnown RBP9.25□□□□□ -0.93
HCG18-244ENST00000602516 SETD1BQ9UPS6 1966 aaKnown RBP9.25□□□□□ -0.93
HCG18-244ENST00000602516 RLBP1P12271 317 aa9.25□□□□□ -0.93
HCG18-244ENST00000602516 FBLN1P23142 703 aa9.25□□□□□ -0.93
HCG18-244ENST00000602516 IL13P35225 146 aa9.25□□□□□ -0.93
HCG18-244ENST00000602516 TDO2P48775 406 aa9.25□□□□□ -0.93
HCG18-244ENST00000602516 ZRSR2Q15696 482 aaKnown RBP9.25□□□□□ -0.93
HCG18-244ENST00000602516 DNAJC21Q5F1R6 531 aaKnown RBP9.25□□□□□ -0.93
HCG18-244ENST00000602516 CREBRFQ8IUR6 639 aa9.25□□□□□ -0.93
HCG18-244ENST00000602516 NCKAP5LQ9HCH0 1330 aa9.24□□□□□ -0.93
HCG18-244ENST00000602516 KCNV2Q8TDN2 545 aa9.24□□□□□ -0.93
HCG18-244ENST00000602516 TSR2Q969E8 191 aaKnown RBP9.24□□□□□ -0.93
HCG18-244ENST00000602516 PAIP2Q9BPZ3 127 aaKnown RBP9.24□□□□□ -0.93
HCG18-244ENST00000602516 PTPRUQ92729 1446 aa9.24□□□□□ -0.93
HCG18-244ENST00000602516 ERBB4Q15303 1308 aa9.24□□□□□ -0.93
HCG18-244ENST00000602516 GTPBP6O43824 516 aaPredicted RBP9.24□□□□□ -0.93
HCG18-244ENST00000602516 PAX7P23759 505 aa9.24□□□□□ -0.93
HCG18-244ENST00000602516 MAMSTRQ6ZN01 415 aa9.24□□□□□ -0.93
HCG18-244ENST00000602516 NALCNQ8IZF0 1738 aa9.24□□□□□ -0.93
HCG18-244ENST00000602516 EXOSC9Q06265 439 aaKnown RBP9.23□□□□□ -0.93
HCG18-244ENST00000602516 NUTM2GQ5VZR2 741 aa9.23□□□□□ -0.93
HCG18-244ENST00000602516 DLG5Q8TDM6 1919 aa9.23□□□□□ -0.93
HCG18-244ENST00000602516 DIP2AQ14689 1571 aa9.23□□□□□ -0.93
HCG18-244ENST00000602516 PLEKHG3A1L390 1219 aa9.23□□□□□ -0.93
HCG18-244ENST00000602516 KIF1CO43896 1103 aaKnown RBP9.23□□□□□ -0.93
HCG18-244ENST00000602516 CALRP27797 417 aaKnown RBP9.23□□□□□ -0.93
HCG18-244ENST00000602516 PRKAR2BP31323 418 aa9.23□□□□□ -0.93
HCG18-244ENST00000602516 SF3A1Q15459 793 aaKnown RBP9.23□□□□□ -0.93
HCG18-244ENST00000602516 FAM161AQ3B820 660 aa9.23□□□□□ -0.93
HCG18-244ENST00000602516 C8orf34Q49A92 452 aa9.23□□□□□ -0.93
HCG18-244ENST00000602516 ZKSCAN2Q63HK3 967 aa9.23□□□□□ -0.93
HCG18-244ENST00000602516 CXorf38Q8TB03 319 aa9.23□□□□□ -0.93
HCG18-244ENST00000602516 ZRANB1Q9UGI0 708 aa9.23□□□□□ -0.93
HCG18-244ENST00000602516 TNNQ9UQP3 1299 aa9.23□□□□□ -0.93
HCG18-244ENST00000602516 EMILIN1Q9Y6C2 1016 aa9.23□□□□□ -0.93
HCG18-244ENST00000602516 OFD1O75665 1012 aa9.22□□□□□ -0.93
HCG18-244ENST00000602516 COG3Q96JB2 828 aa9.22□□□□□ -0.93
HCG18-244ENST00000602516 BCL2L13Q9BXK5 485 aa9.22□□□□□ -0.93
HCG18-244ENST00000602516 GPBP1L1Q9HC44 474 aaPredicted RBP9.22□□□□□ -0.93
HCG18-244ENST00000602516 ANAPC4Q9UJX5 808 aa9.22□□□□□ -0.93
HCG18-244ENST00000602516 ERCC3P19447 782 aa9.22□□□□□ -0.93
HCG18-244ENST00000602516 NOP2P46087 812 aaKnown RBP9.22□□□□□ -0.93
HCG18-244ENST00000602516 RBM5P52756 815 aaKnown RBP eCLIP9.22□□□□□ -0.93
HCG18-244ENST00000602516 PMFBP1Q8TBY8 1022 aa9.22□□□□□ -0.93
HCG18-244ENST00000602516 PTCH1Q13635 1447 aa9.22□□□□□ -0.93
HCG18-244ENST00000602516 MVPQ14764 893 aaKnown RBP9.22□□□□□ -0.93
HCG18-244ENST00000602516 NFE2L2Q16236 605 aa9.22□□□□□ -0.93
HCG18-244ENST00000602516 GORABQ5T7V8 394 aa9.22□□□□□ -0.93
HCG18-244ENST00000602516 TIGD1Q96MW7 591 aa9.22□□□□□ -0.93
HCG18-244ENST00000602516 TBX22Q9Y458 520 aa9.22□□□□□ -0.93
HCG18-244ENST00000602516 FARP1Q9Y4F1 1045 aaPredicted RBP9.22□□□□□ -0.93
HCG18-244ENST00000602516 PCDHB15Q9Y5E8 787 aa9.22□□□□□ -0.93
HCG18-244ENST00000602516 OVOS2A0A0J9YW53 1432 aa9.21□□□□□ -0.93
HCG18-244ENST00000602516 OVOS2Q6IE36 1432 aa9.21□□□□□ -0.93
HCG18-244ENST00000602516 SSH2Q76I76 1423 aa9.21□□□□□ -0.93
HCG18-244ENST00000602516 GTF2A1P52655 376 aaPredicted RBP9.21□□□□□ -0.93
HCG18-244ENST00000602516 C11orf91Q3C1V1 193 aa9.21□□□□□ -0.93
HCG18-244ENST00000602516 CADPS2Q86UW7 1296 aa9.21□□□□□ -0.93
HCG18-244ENST00000602516 HELBQ8NG08 1087 aaPredicted RBP9.21□□□□□ -0.93
HCG18-244ENST00000602516 SSH1Q8WYL5 1049 aa9.21□□□□□ -0.93
HCG18-244ENST00000602516 PHACTR3Q96KR7 559 aa9.21□□□□□ -0.93
HCG18-244ENST00000602516 GZF1Q9H116 711 aaPredicted RBP9.21□□□□□ -0.93
HCG18-244ENST00000602516 EID1Q9Y6B2 187 aa9.21□□□□□ -0.93
HCG18-244ENST00000602516 DYNC1I1O14576 645 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms