RNA–Protein interactions for RNA: ENST00000601809.5

IRF3-230, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-230ENST00000601809 THUMPD2Q9BTF0 503 aaKnown RBP23.15■■□□□ 1.3
IRF3-230ENST00000601809 SRP68Q9UHB9 627 aaKnown RBP23.15■■□□□ 1.3
IRF3-230ENST00000601809 KIAA1551Q9HCM1 1747 aa23.15■■□□□ 1.3
IRF3-230ENST00000601809 COL15A1P39059 1388 aa23.14■■□□□ 1.3
IRF3-230ENST00000601809 RFC4P35249 363 aa23.14■■□□□ 1.29
IRF3-230ENST00000601809 TEX13AQ9BXU3 409 aaPredicted RBP23.14■■□□□ 1.29
IRF3-230ENST00000601809 LAMB4A4D0S4 1761 aa23.14■■□□□ 1.29
IRF3-230ENST00000601809 PRAMEF22A3QJZ6 481 aa23.13■■□□□ 1.29
IRF3-230ENST00000601809 EIF5P55010 431 aaKnown RBP23.13■■□□□ 1.29
IRF3-230ENST00000601809 CCDC146Q8IYE0 955 aa23.13■■□□□ 1.29
IRF3-230ENST00000601809 NLGN1Q8N2Q7 840 aa23.13■■□□□ 1.29
IRF3-230ENST00000601809 RUNDC1Q96C34 613 aa23.13■■□□□ 1.29
IRF3-230ENST00000601809 STARD3NLO95772 234 aa23.12■■□□□ 1.29
IRF3-230ENST00000601809 MMP10P09238 476 aa23.12■■□□□ 1.29
IRF3-230ENST00000601809 WDR43Q15061 677 aaKnown RBP eCLIP23.12■■□□□ 1.29
IRF3-230ENST00000601809 MIS18AQ9NYP9 233 aa23.12■■□□□ 1.29
IRF3-230ENST00000601809 CD2APQ9Y5K6 639 aa23.12■■□□□ 1.29
IRF3-230ENST00000601809 USP16Q9Y5T5 823 aa23.12■■□□□ 1.29
IRF3-230ENST00000601809 RIPK4P57078 832 aa23.11■■□□□ 1.29
IRF3-230ENST00000601809 SCN7AQ01118 1682 aa23.11■■□□□ 1.29
IRF3-230ENST00000601809 FKBP8Q14318 412 aa23.1■■□□□ 1.29
IRF3-230ENST00000601809 BCL2L12Q9HB09 334 aa23.1■■□□□ 1.29
IRF3-230ENST00000601809 TRIM35Q9UPQ4 493 aa23.1■■□□□ 1.29
IRF3-230ENST00000601809 NARFQ9UHQ1 456 aa23.09■■□□□ 1.29
IRF3-230ENST00000601809 C10orf71Q711Q0 1435 aa23.08■■□□□ 1.29
IRF3-230ENST00000601809 NRXN2Q9P2S2 1712 aa23.08■■□□□ 1.29
IRF3-230ENST00000601809 A1BGP04217 495 aa23.08■■□□□ 1.29
IRF3-230ENST00000601809 SNRPA1P09661 255 aaKnown RBP23.08■■□□□ 1.29
IRF3-230ENST00000601809 CANXP27824 592 aaKnown RBP23.08■■□□□ 1.29
IRF3-230ENST00000601809 PNISRQ8TF01 805 aaKnown RBP23.08■■□□□ 1.29
IRF3-230ENST00000601809 RRP7AQ9Y3A4 280 aaKnown RBP23.08■■□□□ 1.29
IRF3-230ENST00000601809 BCORQ6W2J9 1755 aa23.08■■□□□ 1.29
IRF3-230ENST00000601809 TM4SF1P30408 202 aa23.07■■□□□ 1.28
IRF3-230ENST00000601809 IL6STP40189 918 aaPredicted RBP23.07■■□□□ 1.28
IRF3-230ENST00000601809 EIF4A1P60842 406 aaKnown RBP23.07■■□□□ 1.28
IRF3-230ENST00000601809 DDR1Q08345 913 aa23.07■■□□□ 1.28
IRF3-230ENST00000601809 USPL1Q5W0Q7 1092 aa23.07■■□□□ 1.28
IRF3-230ENST00000601809 KLHL34Q8N239 644 aa23.06■■□□□ 1.28
IRF3-230ENST00000601809 AFDNP55196 1824 aaKnown RBP23.05■■□□□ 1.28
IRF3-230ENST00000601809 NBPF26B4DH59 902 aa23.04■■□□□ 1.28
IRF3-230ENST00000601809 GIGYF1O75420 1035 aaPredicted RBP23.04■■□□□ 1.28
IRF3-230ENST00000601809 LMOD3Q0VAK6 560 aa23.04■■□□□ 1.28
IRF3-230ENST00000601809 NBPF10Q6P3W6 841 aaKnown RBP23.04■■□□□ 1.28
IRF3-230ENST00000601809 NBPF15Q8N660 670 aa23.04■■□□□ 1.28
IRF3-230ENST00000601809 BABAM1Q9NWV8 329 aa23.04■■□□□ 1.28
IRF3-230ENST00000601809 PXDNLA1KZ92 1463 aa23.04■■□□□ 1.28
IRF3-230ENST00000601809 POLRMTO00411 1230 aaKnown RBP23.03■■□□□ 1.28
IRF3-230ENST00000601809 ZPR1O75312 459 aa23.02■■□□□ 1.28
IRF3-230ENST00000601809 BRCA1P38398 1863 aaKnown RBP23.02■■□□□ 1.28
IRF3-230ENST00000601809 N4BP2Q86UW6 1770 aaPredicted RBP23.01■■□□□ 1.27
IRF3-230ENST00000601809 A0A087WZG4 1122 aa23.01■■□□□ 1.27
IRF3-230ENST00000601809 PIP4K2AP48426 406 aaPredicted RBP23.01■■□□□ 1.27
IRF3-230ENST00000601809 NEUROD2Q15784 382 aa23.01■■□□□ 1.27
IRF3-230ENST00000601809 ANP32CO43423 234 aa23■■□□□ 1.27
IRF3-230ENST00000601809 CAMTA2O94983 1202 aa23■■□□□ 1.27
IRF3-230ENST00000601809 YBX3P16989 372 aaKnown RBP eCLIP23■■□□□ 1.27
IRF3-230ENST00000601809 NFIXQ14938 502 aa23■■□□□ 1.27
IRF3-230ENST00000601809 PARP3Q9Y6F1 533 aa23■■□□□ 1.27
IRF3-230ENST00000601809 CHL1O00533 1208 aa22.99■■□□□ 1.27
IRF3-230ENST00000601809 TSPYL4Q9UJ04 414 aa22.99■■□□□ 1.27
IRF3-230ENST00000601809 CHD4Q14839 1912 aa22.98■■□□□ 1.27
IRF3-230ENST00000601809 APAF1O14727 1248 aa22.98■■□□□ 1.27
IRF3-230ENST00000601809 TBC1D2BQ9UPU7 963 aa22.98■■□□□ 1.27
IRF3-230ENST00000601809 DCAF8L1A6NGE4 600 aa22.97■■□□□ 1.27
IRF3-230ENST00000601809 TGFB2P61812 414 aa22.96■■□□□ 1.27
IRF3-230ENST00000601809 ZNF853P0CG23 659 aa22.95■■□□□ 1.26
IRF3-230ENST00000601809 TBC1D9BQ66K14 1250 aa22.95■■□□□ 1.26
IRF3-230ENST00000601809 KCNA3P22001 575 aa22.94■■□□□ 1.26
IRF3-230ENST00000601809 GPR162Q16538 588 aa22.94■■□□□ 1.26
IRF3-230ENST00000601809 LRP10Q7Z4F1 713 aa22.94■■□□□ 1.26
IRF3-230ENST00000601809 DZIP3Q86Y13 1208 aaKnown RBP22.94■■□□□ 1.26
IRF3-230ENST00000601809 RGL2O15211 777 aa22.93■■□□□ 1.26
IRF3-230ENST00000601809 MRS2Q9HD23 443 aa22.93■■□□□ 1.26
IRF3-230ENST00000601809 ZNF330Q9Y3S2 320 aaPredicted RBP22.93■■□□□ 1.26
IRF3-230ENST00000601809 ANKRD31Q8N7Z5 1873 aa22.93■■□□□ 1.26
IRF3-230ENST00000601809 DLEC1Q9Y238 1755 aa22.92■■□□□ 1.26
IRF3-230ENST00000601809 PDIA6Q15084 440 aa22.92■■□□□ 1.26
IRF3-230ENST00000601809 CFAP44Q96MT7 982 aa22.92■■□□□ 1.26
IRF3-230ENST00000601809 CARMIL3Q8ND23 1372 aa22.91■■□□□ 1.26
IRF3-230ENST00000601809 ERBB4Q15303 1308 aa22.91■■□□□ 1.26
IRF3-230ENST00000601809 SERPINB2P05120 415 aa22.91■■□□□ 1.26
IRF3-230ENST00000601809 A0A0G2JLW4 131 aa22.9■■□□□ 1.26
IRF3-230ENST00000601809 DPEP1P16444 411 aa22.9■■□□□ 1.26
IRF3-230ENST00000601809 KRT24Q2M2I5 525 aa22.9■■□□□ 1.26
IRF3-230ENST00000601809 CLEC4GQ6UXB4 293 aa22.9■■□□□ 1.26
IRF3-230ENST00000601809 NUP98P52948 1817 aa22.89■■□□□ 1.25
IRF3-230ENST00000601809 ARFGEF1Q9Y6D6 1849 aa22.89■■□□□ 1.25
IRF3-230ENST00000601809 YY1P25490 414 aa22.88■■□□□ 1.25
IRF3-230ENST00000601809 CCDC27Q2M243 656 aa22.88■■□□□ 1.25
IRF3-230ENST00000601809 NCBP3Q53F19 620 aaKnown RBP22.88■■□□□ 1.25
IRF3-230ENST00000601809 PELP1Q8IZL8 1130 aaKnown RBP22.88■■□□□ 1.25
IRF3-230ENST00000601809 GRIN3BO60391 1043 aa22.87■■□□□ 1.25
IRF3-230ENST00000601809 HLFQ16534 295 aa22.87■■□□□ 1.25
IRF3-230ENST00000601809 BICDL1Q6ZP65 573 aa22.87■■□□□ 1.25
IRF3-230ENST00000601809 MBIPQ9NS73 344 aa22.87■■□□□ 1.25
IRF3-230ENST00000601809 COL11A2P13942 1736 aaPredicted RBP22.86■■□□□ 1.25
IRF3-230ENST00000601809 TTLL7Q6ZT98 887 aa22.86■■□□□ 1.25
IRF3-230ENST00000601809 IFT57Q9NWB7 429 aa22.86■■□□□ 1.25
IRF3-230ENST00000601809 PROSER3Q2NL68 480 aa22.85■■□□□ 1.25
IRF3-230ENST00000601809 PRR5LQ6MZQ0 368 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 134.1 ms