RNA–Protein interactions for RNA: ENST00000601607.5

LINC00343-209, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 590 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-209ENST00000601607 USP4Q13107 963 aa11.86□□□□□ -0.51
LINC00343-209ENST00000601607 MAP7D1Q3KQU3 841 aa11.86□□□□□ -0.51
LINC00343-209ENST00000601607 GLMNQ92990 594 aa11.85□□□□□ -0.51
LINC00343-209ENST00000601607 DNMT3LQ9UJW3 386 aa11.85□□□□□ -0.51
LINC00343-209ENST00000601607 LTBP4Q8N2S1 1624 aa11.85□□□□□ -0.51
LINC00343-209ENST00000601607 PTPRTO14522 1441 aa11.85□□□□□ -0.51
LINC00343-209ENST00000601607 UHRF1BP1Q6BDS2 1440 aa11.85□□□□□ -0.51
LINC00343-209ENST00000601607 STRCQ7RTU9 1775 aa11.84□□□□□ -0.51
LINC00343-209ENST00000601607 FIGNL2A6NMB9 653 aa11.84□□□□□ -0.51
LINC00343-209ENST00000601607 ZMYM4Q5VZL5 1548 aa11.84□□□□□ -0.51
LINC00343-209ENST00000601607 RICTORQ6R327 1708 aa11.83□□□□□ -0.52
LINC00343-209ENST00000601607 EFCAB5A4FU69 1503 aa11.83□□□□□ -0.52
LINC00343-209ENST00000601607 ARHGEF12Q9NZN5 1544 aa11.83□□□□□ -0.52
LINC00343-209ENST00000601607 A0A1W2PRU2 124 aa11.83□□□□□ -0.52
LINC00343-209ENST00000601607 MEN1O00255 615 aa11.83□□□□□ -0.52
LINC00343-209ENST00000601607 FAM9AQ8IZU1 332 aaPredicted RBP11.83□□□□□ -0.52
LINC00343-209ENST00000601607 NFATC2IPQ8NCF5 419 aa11.83□□□□□ -0.52
LINC00343-209ENST00000601607 PREX1Q8TCU6 1659 aa11.83□□□□□ -0.52
LINC00343-209ENST00000601607 FER1L4A9Z1Z3 1794 aa11.82□□□□□ -0.52
LINC00343-209ENST00000601607 PPFIA3O75145 1194 aa11.82□□□□□ -0.52
LINC00343-209ENST00000601607 SIRT1Q96EB6 747 aa11.82□□□□□ -0.52
LINC00343-209ENST00000601607 ARHGEF10LQ9HCE6 1279 aa11.82□□□□□ -0.52
LINC00343-209ENST00000601607 IQSEC2Q5JU85 1478 aa11.82□□□□□ -0.52
LINC00343-209ENST00000601607 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.81□□□□□ -0.52
LINC00343-209ENST00000601607 UCN2Q96RP3 112 aa11.81□□□□□ -0.52
LINC00343-209ENST00000601607 MAGI2Q86UL8 1455 aa11.81□□□□□ -0.52
LINC00343-209ENST00000601607 CTTNBP2Q8WZ74 1663 aa11.81□□□□□ -0.52
LINC00343-209ENST00000601607 UBAP1LF5GYI3 381 aa11.8□□□□□ -0.52
LINC00343-209ENST00000601607 CALR3Q96L12 384 aaKnown RBP11.8□□□□□ -0.52
LINC00343-209ENST00000601607 RAB6BQ9NRW1 208 aa11.8□□□□□ -0.52
LINC00343-209ENST00000601607 ZNF777Q9ULD5 760 aaPredicted RBP11.8□□□□□ -0.52
LINC00343-209ENST00000601607 USP17L5A8MUK1 530 aa11.79□□□□□ -0.52
LINC00343-209ENST00000601607 GNRH1P01148 92 aa11.79□□□□□ -0.52
LINC00343-209ENST00000601607 FOXD4L5Q5VV16 416 aaPredicted RBP11.79□□□□□ -0.52
LINC00343-209ENST00000601607 TBC1D9Q6ZT07 1266 aa11.79□□□□□ -0.52
LINC00343-209ENST00000601607 DEPDC4Q8N2C3 294 aa11.79□□□□□ -0.52
LINC00343-209ENST00000601607 RNF217Q8TC41 542 aa11.79□□□□□ -0.52
LINC00343-209ENST00000601607 NLRP3Q96P20 1036 aa11.79□□□□□ -0.52
LINC00343-209ENST00000601607 HECW1Q76N89 1606 aa11.78□□□□□ -0.52
LINC00343-209ENST00000601607 CLN3Q13286 438 aa11.78□□□□□ -0.52
LINC00343-209ENST00000601607 NCOA4Q13772 614 aa11.78□□□□□ -0.52
LINC00343-209ENST00000601607 EML3Q32P44 896 aa11.78□□□□□ -0.52
LINC00343-209ENST00000601607 ZMYND15Q9H091 742 aa11.78□□□□□ -0.52
LINC00343-209ENST00000601607 ATP10AO60312 1499 aa11.77□□□□□ -0.52
LINC00343-209ENST00000601607 NUP153P49790 1475 aaKnown RBP11.77□□□□□ -0.52
LINC00343-209ENST00000601607 C9orf84Q5VXU9 1444 aa11.77□□□□□ -0.53
LINC00343-209ENST00000601607 STAU1O95793 577 aaKnown RBP11.76□□□□□ -0.53
LINC00343-209ENST00000601607 RNF144AP50876 292 aaPredicted RBP11.76□□□□□ -0.53
LINC00343-209ENST00000601607 SCAPERQ9BY12 1400 aa11.76□□□□□ -0.53
LINC00343-209ENST00000601607 PLEKHD1A6NEE1 506 aa11.75□□□□□ -0.53
LINC00343-209ENST00000601607 ATP9BO43861 1147 aa11.75□□□□□ -0.53
LINC00343-209ENST00000601607 LZTS3O60299 673 aaPredicted RBP11.75□□□□□ -0.53
LINC00343-209ENST00000601607 IL2RAP01589 272 aa11.75□□□□□ -0.53
LINC00343-209ENST00000601607 CNKSR1Q969H4 720 aa11.75□□□□□ -0.53
LINC00343-209ENST00000601607 NOD1Q9Y239 953 aa11.75□□□□□ -0.53
LINC00343-209ENST00000601607 NCOA1Q15788 1441 aa11.75□□□□□ -0.53
LINC00343-209ENST00000601607 CFAP74Q9C0B2 1584 aa11.75□□□□□ -0.53
LINC00343-209ENST00000601607 RAPGEF6Q8TEU7 1601 aa11.75□□□□□ -0.53
LINC00343-209ENST00000601607 USP17L3A6NCW0 530 aa11.74□□□□□ -0.53
LINC00343-209ENST00000601607 USP17L4A6NCW7 530 aa11.74□□□□□ -0.53
LINC00343-209ENST00000601607 USP17L2Q6R6M4 530 aa11.74□□□□□ -0.53
LINC00343-209ENST00000601607 USP17L1Q7RTZ2 530 aa11.74□□□□□ -0.53
LINC00343-209ENST00000601607 ESYT1Q9BSJ8 1104 aa11.74□□□□□ -0.53
LINC00343-209ENST00000601607 ZNF335Q9H4Z2 1342 aaPredicted RBP11.74□□□□□ -0.53
LINC00343-209ENST00000601607 PRXQ9BXM0 1461 aa11.74□□□□□ -0.53
LINC00343-209ENST00000601607 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.74□□□□□ -0.53
LINC00343-209ENST00000601607 GPC1P35052 558 aa11.73□□□□□ -0.53
LINC00343-209ENST00000601607 PTSQ03393 145 aa11.73□□□□□ -0.53
LINC00343-209ENST00000601607 MED1Q15648 1581 aaPredicted RBP11.73□□□□□ -0.53
LINC00343-209ENST00000601607 ESCO1Q5FWF5 840 aa11.73□□□□□ -0.53
LINC00343-209ENST00000601607 SLC27A3Q5K4L6 730 aa11.73□□□□□ -0.53
LINC00343-209ENST00000601607 LYSMD3Q7Z3D4 306 aa11.73□□□□□ -0.53
LINC00343-209ENST00000601607 PRICKLE2Q7Z3G6 844 aa11.73□□□□□ -0.53
LINC00343-209ENST00000601607 TFIP11Q9UBB9 837 aaKnown RBP11.73□□□□□ -0.53
LINC00343-209ENST00000601607 HSPA1LP34931 641 aa11.72□□□□□ -0.53
LINC00343-209ENST00000601607 PLEKHM2Q8IWE5 1019 aa11.72□□□□□ -0.53
LINC00343-209ENST00000601607 XAGE2Q96GT9 111 aa11.72□□□□□ -0.53
LINC00343-209ENST00000601607 ETNK1Q9HBU6 452 aa11.72□□□□□ -0.53
LINC00343-209ENST00000601607 GTF2IP78347 998 aa11.71□□□□□ -0.53
LINC00343-209ENST00000601607 PALM3A6NDB9 673 aaPredicted RBP11.7□□□□□ -0.54
LINC00343-209ENST00000601607 SCNN1DP51172 638 aa11.7□□□□□ -0.54
LINC00343-209ENST00000601607 CENPCQ03188 943 aa11.7□□□□□ -0.54
LINC00343-209ENST00000601607 PSME1Q06323 249 aa11.7□□□□□ -0.54
LINC00343-209ENST00000601607 PCDHGA11Q9Y5H2 935 aa11.7□□□□□ -0.54
LINC00343-209ENST00000601607 TRAPPC8Q9Y2L5 1435 aa11.69□□□□□ -0.54
LINC00343-209ENST00000601607 RHOQP17081 205 aa11.69□□□□□ -0.54
LINC00343-209ENST00000601607 GDF10P55107 478 aa11.69□□□□□ -0.54
LINC00343-209ENST00000601607 C14orf37Q86TY3 774 aa11.69□□□□□ -0.54
LINC00343-209ENST00000601607 PPP1R12CQ9BZL4 782 aa11.69□□□□□ -0.54
LINC00343-209ENST00000601607 GRIP2Q9C0E4 1043 aa11.69□□□□□ -0.54
LINC00343-209ENST00000601607 HRH3Q9Y5N1 445 aa11.69□□□□□ -0.54
LINC00343-209ENST00000601607 MAFBQ9Y5Q3 323 aaPredicted RBP11.69□□□□□ -0.54
LINC00343-209ENST00000601607 SAMD9Q5K651 1589 aa11.68□□□□□ -0.54
LINC00343-209ENST00000601607 NANOS1Q8WY41 292 aaKnown RBP11.68□□□□□ -0.54
LINC00343-209ENST00000601607 PLCH2O75038 1416 aa11.68□□□□□ -0.54
LINC00343-209ENST00000601607 INHAP05111 366 aa11.67□□□□□ -0.54
LINC00343-209ENST00000601607 PIP4K2BP78356 416 aa11.67□□□□□ -0.54
LINC00343-209ENST00000601607 POU4F2Q12837 409 aa11.67□□□□□ -0.54
LINC00343-209ENST00000601607 TRIM50Q86XT4 487 aa11.67□□□□□ -0.54
LINC00343-209ENST00000601607 CCDC155Q8N6L0 562 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms