RNA–Protein interactions for RNA: ENST00000601592.5

USE1-209, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-209ENST00000601592 KLHL34Q8N239 644 aa16.81■□□□□ 0.28
USE1-209ENST00000601592 PNISRQ8TF01 805 aaKnown RBP16.81■□□□□ 0.28
USE1-209ENST00000601592 ADRA2BP18089 450 aa16.8■□□□□ 0.28
USE1-209ENST00000601592 INTS5Q6P9B9 1019 aaKnown RBP16.8■□□□□ 0.28
USE1-209ENST00000601592 ARXQ96QS3 562 aa16.8■□□□□ 0.28
USE1-209ENST00000601592 TEX13AQ9BXU3 409 aaPredicted RBP16.8■□□□□ 0.28
USE1-209ENST00000601592 ZBTB1Q9Y2K1 713 aa16.8■□□□□ 0.28
USE1-209ENST00000601592 SENP3-EIF4A1A0A087X0R7 540 aa16.79■□□□□ 0.28
USE1-209ENST00000601592 CANXP27824 592 aaKnown RBP16.79■□□□□ 0.28
USE1-209ENST00000601592 ARHGEF1Q92888 912 aaKnown RBP16.79■□□□□ 0.28
USE1-209ENST00000601592 SGIP1Q9BQI5 828 aa16.79■□□□□ 0.28
USE1-209ENST00000601592 TSPYL4Q9UJ04 414 aa16.79■□□□□ 0.28
USE1-209ENST00000601592 ZNF330Q9Y3S2 320 aaPredicted RBP16.79■□□□□ 0.28
USE1-209ENST00000601592 LAS1LQ9Y4W2 734 aaKnown RBP16.79■□□□□ 0.28
USE1-209ENST00000601592 TRIM35Q9UPQ4 493 aa16.78■□□□□ 0.28
USE1-209ENST00000601592 COL15A1P39059 1388 aa16.77■□□□□ 0.28
USE1-209ENST00000601592 SOS1Q07889 1333 aaPredicted RBP16.77■□□□□ 0.28
USE1-209ENST00000601592 PRAMEF22A3QJZ6 481 aa16.77■□□□□ 0.28
USE1-209ENST00000601592 SNRPA1P09661 255 aaKnown RBP16.77■□□□□ 0.28
USE1-209ENST00000601592 FAM9BQ8IZU0 186 aa16.77■□□□□ 0.28
USE1-209ENST00000601592 NPM2Q86SE8 214 aaKnown RBP16.76■□□□□ 0.27
USE1-209ENST00000601592 FHDC1Q9C0D6 1143 aaPredicted RBP16.76■□□□□ 0.27
USE1-209ENST00000601592 SRP68Q9UHB9 627 aaKnown RBP16.76■□□□□ 0.27
USE1-209ENST00000601592 A1BGP04217 495 aa16.75■□□□□ 0.27
USE1-209ENST00000601592 USP16Q9Y5T5 823 aa16.75■□□□□ 0.27
USE1-209ENST00000601592 ZPR1O75312 459 aa16.74■□□□□ 0.27
USE1-209ENST00000601592 PIP4K2AP48426 406 aaPredicted RBP16.74■□□□□ 0.27
USE1-209ENST00000601592 EIF4A1P60842 406 aaKnown RBP16.74■□□□□ 0.27
USE1-209ENST00000601592 USP42Q9H9J4 1324 aaKnown RBP16.73■□□□□ 0.27
USE1-209ENST00000601592 SCN7AQ01118 1682 aa16.73■□□□□ 0.27
USE1-209ENST00000601592 MMP10P09238 476 aa16.72■□□□□ 0.27
USE1-209ENST00000601592 GYS1P13807 737 aa16.72■□□□□ 0.27
USE1-209ENST00000601592 USPL1Q5W0Q7 1092 aa16.72■□□□□ 0.27
USE1-209ENST00000601592 NLGN1Q8N2Q7 840 aa16.72■□□□□ 0.27
USE1-209ENST00000601592 BCORQ6W2J9 1755 aa16.72■□□□□ 0.27
USE1-209ENST00000601592 GIGYF1O75420 1035 aaPredicted RBP16.71■□□□□ 0.27
USE1-209ENST00000601592 SYT17Q9BSW7 474 aa16.71■□□□□ 0.27
USE1-209ENST00000601592 BABAM1Q9NWV8 329 aa16.71■□□□□ 0.27
USE1-209ENST00000601592 SALL2Q9Y467 1007 aaPredicted RBP16.71■□□□□ 0.27
USE1-209ENST00000601592 A0A087WZG4 1122 aa16.7■□□□□ 0.26
USE1-209ENST00000601592 IL6STP40189 918 aaPredicted RBP16.7■□□□□ 0.26
USE1-209ENST00000601592 EIF5P55010 431 aaKnown RBP16.7■□□□□ 0.26
USE1-209ENST00000601592 CALD1Q05682 793 aaKnown RBP16.7■□□□□ 0.26
USE1-209ENST00000601592 FKBP8Q14318 412 aa16.7■□□□□ 0.26
USE1-209ENST00000601592 DIEXFQ68CQ4 756 aaKnown RBP16.7■□□□□ 0.26
USE1-209ENST00000601592 NARFQ9UHQ1 456 aa16.7■□□□□ 0.26
USE1-209ENST00000601592 AFDNP55196 1824 aaKnown RBP16.69■□□□□ 0.26
USE1-209ENST00000601592 TBC1D2BQ9UPU7 963 aa16.69■□□□□ 0.26
USE1-209ENST00000601592 PARP3Q9Y6F1 533 aa16.69■□□□□ 0.26
USE1-209ENST00000601592 CHL1O00533 1208 aa16.68■□□□□ 0.26
USE1-209ENST00000601592 EIF2S2P20042 333 aaKnown RBP16.68■□□□□ 0.26
USE1-209ENST00000601592 CFAP44Q96MT7 982 aa16.68■□□□□ 0.26
USE1-209ENST00000601592 DCAF8L1A6NGE4 600 aa16.67■□□□□ 0.26
USE1-209ENST00000601592 GNAI1P63096 354 aa16.67■□□□□ 0.26
USE1-209ENST00000601592 KRT24Q2M2I5 525 aa16.67■□□□□ 0.26
USE1-209ENST00000601592 DZIP3Q86Y13 1208 aaKnown RBP16.67■□□□□ 0.26
USE1-209ENST00000601592 NGEFQ8N5V2 710 aa16.67■□□□□ 0.26
USE1-209ENST00000601592 NECTIN2Q92692 538 aa16.67■□□□□ 0.26
USE1-209ENST00000601592 KIF13BQ9NQT8 1826 aa16.66■□□□□ 0.26
USE1-209ENST00000601592 NBPF26B4DH59 902 aa16.66■□□□□ 0.26
USE1-209ENST00000601592 MYL6BP14649 208 aa16.66■□□□□ 0.26
USE1-209ENST00000601592 NBPF10Q6P3W6 841 aaKnown RBP16.66■□□□□ 0.26
USE1-209ENST00000601592 BICDL1Q6ZP65 573 aa16.66■□□□□ 0.26
USE1-209ENST00000601592 NBPF15Q8N660 670 aa16.66■□□□□ 0.26
USE1-209ENST00000601592 NLGN2Q8NFZ4 835 aa16.66■□□□□ 0.26
USE1-209ENST00000601592 MBIPQ9NS73 344 aa16.66■□□□□ 0.26
USE1-209ENST00000601592 IFT57Q9NWB7 429 aa16.66■□□□□ 0.26
USE1-209ENST00000601592 N4BP2Q86UW6 1770 aaPredicted RBP16.66■□□□□ 0.26
USE1-209ENST00000601592 PELP1Q8IZL8 1130 aaKnown RBP16.65■□□□□ 0.26
USE1-209ENST00000601592 NUP98P52948 1817 aa16.64■□□□□ 0.25
USE1-209ENST00000601592 DDR1Q08345 913 aa16.64■□□□□ 0.25
USE1-209ENST00000601592 CCDC27Q2M243 656 aa16.64■□□□□ 0.25
USE1-209ENST00000601592 WWC1Q8IX03 1113 aa16.64■□□□□ 0.25
USE1-209ENST00000601592 BCL2L12Q9HB09 334 aa16.64■□□□□ 0.25
USE1-209ENST00000601592 CD2APQ9Y5K6 639 aa16.64■□□□□ 0.25
USE1-209ENST00000601592 CCER2I3L3R5 266 aa16.63■□□□□ 0.25
USE1-209ENST00000601592 CAMTA2O94983 1202 aa16.63■□□□□ 0.25
USE1-209ENST00000601592 NFIXQ14938 502 aa16.63■□□□□ 0.25
USE1-209ENST00000601592 ZNF853P0CG23 659 aa16.62■□□□□ 0.25
USE1-209ENST00000601592 TBC1D9BQ66K14 1250 aa16.62■□□□□ 0.25
USE1-209ENST00000601592 TSR2Q969E8 191 aaKnown RBP16.62■□□□□ 0.25
USE1-209ENST00000601592 ERBB4Q15303 1308 aa16.62■□□□□ 0.25
USE1-209ENST00000601592 C10orf71Q711Q0 1435 aa16.62■□□□□ 0.25
USE1-209ENST00000601592 POLRMTO00411 1230 aaKnown RBP16.61■□□□□ 0.25
USE1-209ENST00000601592 ANXA1P04083 346 aa16.61■□□□□ 0.25
USE1-209ENST00000601592 TM4SF1P30408 202 aa16.61■□□□□ 0.25
USE1-209ENST00000601592 HDGFL1Q5TGJ6 251 aa16.61■□□□□ 0.25
USE1-209ENST00000601592 DUSP27Q5VZP5 1158 aa16.61■□□□□ 0.25
USE1-209ENST00000601592 KIF6Q6ZMV9 814 aa16.61■□□□□ 0.25
USE1-209ENST00000601592 WWC3Q9ULE0 1092 aa16.61■□□□□ 0.25
USE1-209ENST00000601592 ZNF652Q9Y2D9 606 aa16.61■□□□□ 0.25
USE1-209ENST00000601592 KIAA1551Q9HCM1 1747 aa16.61■□□□□ 0.25
USE1-209ENST00000601592 NRXN2Q9P2S2 1712 aa16.61■□□□□ 0.25
USE1-209ENST00000601592 ELL2O00472 640 aaPredicted RBP16.6■□□□□ 0.25
USE1-209ENST00000601592 NPHP1O15259 732 aa16.6■□□□□ 0.25
USE1-209ENST00000601592 GPR162Q16538 588 aa16.6■□□□□ 0.25
USE1-209ENST00000601592 MIER1Q8N108 512 aa16.6■□□□□ 0.25
USE1-209ENST00000601592 SERPINB2P05120 415 aa16.59■□□□□ 0.25
USE1-209ENST00000601592 PROSER3Q2NL68 480 aa16.59■□□□□ 0.25
USE1-209ENST00000601592 TTLL7Q6ZT98 887 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms