RNA–Protein interactions for RNA: ENST00000600517.1

ARHGEF1-222, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-222ENST00000600517 CCDC146Q8IYE0 955 aa17.76■□□□□ 0.43
ARHGEF1-222ENST00000600517 KLHL34Q8N239 644 aa17.76■□□□□ 0.43
ARHGEF1-222ENST00000600517 THUMPD2Q9BTF0 503 aaKnown RBP17.76■□□□□ 0.43
ARHGEF1-222ENST00000600517 MIS18AQ9NYP9 233 aa17.76■□□□□ 0.43
ARHGEF1-222ENST00000600517 CD2APQ9Y5K6 639 aa17.76■□□□□ 0.43
ARHGEF1-222ENST00000600517 USP42Q9H9J4 1324 aaKnown RBP17.75■□□□□ 0.43
ARHGEF1-222ENST00000600517 MMP10P09238 476 aa17.75■□□□□ 0.43
ARHGEF1-222ENST00000600517 SNRPA1P09661 255 aaKnown RBP17.75■□□□□ 0.43
ARHGEF1-222ENST00000600517 CANXP27824 592 aaKnown RBP17.75■□□□□ 0.43
ARHGEF1-222ENST00000600517 EIF5P55010 431 aaKnown RBP17.74■□□□□ 0.43
ARHGEF1-222ENST00000600517 SRP68Q9UHB9 627 aaKnown RBP17.74■□□□□ 0.43
ARHGEF1-222ENST00000600517 USP16Q9Y5T5 823 aa17.74■□□□□ 0.43
ARHGEF1-222ENST00000600517 ANP32CO43423 234 aa17.73■□□□□ 0.43
ARHGEF1-222ENST00000600517 ZPR1O75312 459 aa17.73■□□□□ 0.43
ARHGEF1-222ENST00000600517 A1BGP04217 495 aa17.73■□□□□ 0.43
ARHGEF1-222ENST00000600517 LMOD3Q0VAK6 560 aa17.73■□□□□ 0.43
ARHGEF1-222ENST00000600517 CCDC184Q52MB2 194 aa17.73■□□□□ 0.43
ARHGEF1-222ENST00000600517 NLGN2Q8NFZ4 835 aa17.73■□□□□ 0.43
ARHGEF1-222ENST00000600517 NARFQ9UHQ1 456 aa17.73■□□□□ 0.43
ARHGEF1-222ENST00000600517 RRP7AQ9Y3A4 280 aaKnown RBP17.73■□□□□ 0.43
ARHGEF1-222ENST00000600517 A0A087WZG4 1122 aa17.72■□□□□ 0.43
ARHGEF1-222ENST00000600517 IL6STP40189 918 aaPredicted RBP17.72■□□□□ 0.43
ARHGEF1-222ENST00000600517 FKBP8Q14318 412 aa17.72■□□□□ 0.43
ARHGEF1-222ENST00000600517 COL15A1P39059 1388 aa17.71■□□□□ 0.43
ARHGEF1-222ENST00000600517 PRAMEF22A3QJZ6 481 aa17.71■□□□□ 0.43
ARHGEF1-222ENST00000600517 NEUROD2Q15784 382 aa17.71■□□□□ 0.43
ARHGEF1-222ENST00000600517 USPL1Q5W0Q7 1092 aa17.71■□□□□ 0.43
ARHGEF1-222ENST00000600517 BABAM1Q9NWV8 329 aa17.71■□□□□ 0.43
ARHGEF1-222ENST00000600517 TRIM35Q9UPQ4 493 aa17.71■□□□□ 0.43
ARHGEF1-222ENST00000600517 DLG5Q8TDM6 1919 aa17.7■□□□□ 0.42
ARHGEF1-222ENST00000600517 TM4SF1P30408 202 aa17.7■□□□□ 0.42
ARHGEF1-222ENST00000600517 EIF4A1P60842 406 aaKnown RBP17.7■□□□□ 0.42
ARHGEF1-222ENST00000600517 BCL2L12Q9HB09 334 aa17.69■□□□□ 0.42
ARHGEF1-222ENST00000600517 PARP3Q9Y6F1 533 aa17.69■□□□□ 0.42
ARHGEF1-222ENST00000600517 GIGYF1O75420 1035 aaPredicted RBP17.68■□□□□ 0.42
ARHGEF1-222ENST00000600517 C4AP0C0L4 1744 aa17.67■□□□□ 0.42
ARHGEF1-222ENST00000600517 APAF1O14727 1248 aa17.67■□□□□ 0.42
ARHGEF1-222ENST00000600517 DDR1Q08345 913 aa17.67■□□□□ 0.42
ARHGEF1-222ENST00000600517 GPR162Q16538 588 aa17.67■□□□□ 0.42
ARHGEF1-222ENST00000600517 TSPYL4Q9UJ04 414 aa17.67■□□□□ 0.42
ARHGEF1-222ENST00000600517 NBPF26B4DH59 902 aa17.66■□□□□ 0.42
ARHGEF1-222ENST00000600517 CHL1O00533 1208 aa17.66■□□□□ 0.42
ARHGEF1-222ENST00000600517 NBPF10Q6P3W6 841 aaKnown RBP17.66■□□□□ 0.42
ARHGEF1-222ENST00000600517 NPM2Q86SE8 214 aaKnown RBP17.66■□□□□ 0.42
ARHGEF1-222ENST00000600517 NBPF15Q8N660 670 aa17.66■□□□□ 0.42
ARHGEF1-222ENST00000600517 TBC1D2BQ9UPU7 963 aa17.66■□□□□ 0.42
ARHGEF1-222ENST00000600517 POLRMTO00411 1230 aaKnown RBP17.65■□□□□ 0.42
ARHGEF1-222ENST00000600517 PIP4K2AP48426 406 aaPredicted RBP17.65■□□□□ 0.42
ARHGEF1-222ENST00000600517 NFIXQ14938 502 aa17.65■□□□□ 0.42
ARHGEF1-222ENST00000600517 MRS2Q9HD23 443 aa17.65■□□□□ 0.42
ARHGEF1-222ENST00000600517 ZNF330Q9Y3S2 320 aaPredicted RBP17.65■□□□□ 0.42
ARHGEF1-222ENST00000600517 TGFB2P61812 414 aa17.64■□□□□ 0.41
ARHGEF1-222ENST00000600517 KDM3BQ7LBC6 1761 aa17.63■□□□□ 0.41
ARHGEF1-222ENST00000600517 DZIP3Q86Y13 1208 aaKnown RBP17.63■□□□□ 0.41
ARHGEF1-222ENST00000600517 PELP1Q8IZL8 1130 aaKnown RBP17.63■□□□□ 0.41
ARHGEF1-222ENST00000600517 C10orf71Q711Q0 1435 aa17.63■□□□□ 0.41
ARHGEF1-222ENST00000600517 CAMTA2O94983 1202 aa17.62■□□□□ 0.41
ARHGEF1-222ENST00000600517 YBX3P16989 372 aaKnown RBP eCLIP17.62■□□□□ 0.41
ARHGEF1-222ENST00000600517 GRIN3BO60391 1043 aa17.61■□□□□ 0.41
ARHGEF1-222ENST00000600517 SERPINB2P05120 415 aa17.61■□□□□ 0.41
ARHGEF1-222ENST00000600517 A0A0G2JLW4 131 aa17.6■□□□□ 0.41
ARHGEF1-222ENST00000600517 RGL2O15211 777 aa17.6■□□□□ 0.41
ARHGEF1-222ENST00000600517 TBC1D9BQ66K14 1250 aa17.6■□□□□ 0.41
ARHGEF1-222ENST00000600517 CLEC4GQ6UXB4 293 aa17.6■□□□□ 0.41
ARHGEF1-222ENST00000600517 CFAP44Q96MT7 982 aa17.6■□□□□ 0.41
ARHGEF1-222ENST00000600517 LAS1LQ9Y4W2 734 aaKnown RBP17.6■□□□□ 0.41
ARHGEF1-222ENST00000600517 ZNF853P0CG23 659 aa17.59■□□□□ 0.41
ARHGEF1-222ENST00000600517 CALD1Q05682 793 aaKnown RBP17.59■□□□□ 0.41
ARHGEF1-222ENST00000600517 BICDL1Q6ZP65 573 aa17.59■□□□□ 0.41
ARHGEF1-222ENST00000600517 PXDNLA1KZ92 1463 aa17.58■□□□□ 0.41
ARHGEF1-222ENST00000600517 ERBB4Q15303 1308 aa17.58■□□□□ 0.4
ARHGEF1-222ENST00000600517 DPEP1P16444 411 aa17.58■□□□□ 0.4
ARHGEF1-222ENST00000600517 KCNA3P22001 575 aa17.58■□□□□ 0.4
ARHGEF1-222ENST00000600517 YY1P25490 414 aa17.58■□□□□ 0.4
ARHGEF1-222ENST00000600517 PDIA6Q15084 440 aa17.57■□□□□ 0.4
ARHGEF1-222ENST00000600517 NCBP3Q53F19 620 aaKnown RBP17.57■□□□□ 0.4
ARHGEF1-222ENST00000600517 SETDB2Q96T68 719 aa17.57■□□□□ 0.4
ARHGEF1-222ENST00000600517 IFT57Q9NWB7 429 aa17.57■□□□□ 0.4
ARHGEF1-222ENST00000600517 EIF2S2P20042 333 aaKnown RBP17.56■□□□□ 0.4
ARHGEF1-222ENST00000600517 CCDC27Q2M243 656 aa17.56■□□□□ 0.4
ARHGEF1-222ENST00000600517 ZNF652Q9Y2D9 606 aa17.56■□□□□ 0.4
ARHGEF1-222ENST00000600517 KIF13BQ9NQT8 1826 aa17.56■□□□□ 0.4
ARHGEF1-222ENST00000600517 UTRNP46939 3433 aa17.56■□□□□ 0.4
ARHGEF1-222ENST00000600517 ERVV-1B6SEH8 477 aa17.55■□□□□ 0.4
ARHGEF1-222ENST00000600517 MYL6BP14649 208 aa17.55■□□□□ 0.4
ARHGEF1-222ENST00000600517 GNAI1P63096 354 aa17.55■□□□□ 0.4
ARHGEF1-222ENST00000600517 KRT24Q2M2I5 525 aa17.55■□□□□ 0.4
ARHGEF1-222ENST00000600517 NGEFQ8N5V2 710 aa17.55■□□□□ 0.4
ARHGEF1-222ENST00000600517 MBIPQ9NS73 344 aa17.55■□□□□ 0.4
ARHGEF1-222ENST00000600517 WWC3Q9ULE0 1092 aa17.55■□□□□ 0.4
ARHGEF1-222ENST00000600517 CARMIL3Q8ND23 1372 aa17.54■□□□□ 0.4
ARHGEF1-222ENST00000600517 HOXB7P09629 217 aa17.54■□□□□ 0.4
ARHGEF1-222ENST00000600517 HLFQ16534 295 aa17.54■□□□□ 0.4
ARHGEF1-222ENST00000600517 TTLL7Q6ZT98 887 aa17.54■□□□□ 0.4
ARHGEF1-222ENST00000600517 LRP10Q7Z4F1 713 aa17.54■□□□□ 0.4
ARHGEF1-222ENST00000600517 PIM2Q9P1W9 311 aa17.54■□□□□ 0.4
ARHGEF1-222ENST00000600517 GOLGB1Q14789 3259 aaKnown RBP17.53■□□□□ 0.4
ARHGEF1-222ENST00000600517 LAMB4A4D0S4 1761 aa17.53■□□□□ 0.4
ARHGEF1-222ENST00000600517 SCN7AQ01118 1682 aa17.53■□□□□ 0.4
ARHGEF1-222ENST00000600517 CHRNA5P30532 468 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 308.6 ms